Lepidochelys kempii (Atlantic ridley): 140907410
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Entry
140907410 CDS
T11378
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04621
NOD-like receptor signaling pathway
lkp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
140907410 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140907410 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lkp04054
]
140907410 (NOD1)
Pattern recognition receptors [BR:
lkp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
140907410 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
CARD
LRR_4
WHD_NOD2
FumaraseC_C
AAA_22
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
140907410
NCBI-ProteinID:
XP_073189400
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All DBs
Position
2:complement(192990246..193048495)
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AA seq
951 aa
AA seq
DB search
MEGQSCANTKIIQQVPSGSSPPPFLNLLKIHRELLVSKIRNTQCLIDNLIKNEYFSTEDA
EIAAQFPIQADKVRKILDLVQSKGEEVSEYFIYILQEVSDAYYELQPWLDEIDFHPSQNI
QNKPVVNTDPVSRYRQKLKYELARDTKFVMSYAQKEEMLLEETYAASLIELVSYTNESLG
KVSRLEDLFDDRIGLINEDGETIYIFGDAGIGKSILLQKMQNLWARGELDVGAKFFFRFR
CRMFSCFKENEAICLKDLLFKYNCYPDQDPEEVFNHILHFPHTALFTFDGFDEIHSDFDL
SSIPEICSPKEPTHPLALLVNLLSGKVLKGSRKVLTARTGTEIHQNIIRKKVLLRGFSSS
NLKEYTKNFFRDEECRVLMSNQLEANPSLCSLCSVPLFCWIIFKCFELLRSMFDSHELPN
YSVTLTDVFLLMTEVHLNRTLKTNLLKKNTRSQVETFRSKKETLFSLGTIAHMGMEKSLF
IFDQEEVTSLHVSEQDLHLGFLRTVHDCGGYGDQSSCEFLHLTLQSFFTALFLVTEEKLG
TKELLKFFSECSSTDTAHSTCLPISWLRKCPIGEDPFRNKEHFHFTNLFLCGLLSKDKEK
LIRHLVSPAAIKRKRNALITYLLESMKFQMQSLMRARLKGYKQIQVMPNFVWMLRCIYET
QSEKLAKLTVRGMRANYIKLTYCNAYSADCSAISFVMQHFQKHLGLDLDNNNINDYGVKQ
LQPCFNKLAVIRLSVNQITDHGVRVLYDELSKYKIVTFLGLYNNQITDVGARYVARLIEE
CSSLTYVKIGANKITTEGGKCLALAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPTL
TNVSLAFNGITTEGGKSIAEALQHNSTVKIFWLTKNAIDDEAAKSFAEMLRVNKKLAHLW
LIQNQITAKGAKYLSEALQENTTLKEICLNGNLINQEEAKAFADEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcagtcttgtgctaatacaaagattatccagcaagtaccctctggatcaagt
cctccacccttccttaacttgctgaaaatacatcgagaacttttagtcagcaaaatccga
aacacccagtgtttgattgacaacttgatcaagaatgaatacttctctactgaagatgca
gagattgccgcacagtttcctattcaagccgacaaggttcgtaaaattctggatctggtt
caaagcaaaggagaagaagtttcagaatatttcatctacatcctgcaagaggtctctgat
gcgtattatgaactacagccttggttggatgaaatagatttccacccttcacagaatatt
caaaataaacctgttgtaaatacagatccagtcagcaggtaccgtcagaaactcaaatat
gaattggcacgagacacaaagtttgttatgtcgtatgctcagaaggaggaaatgcttctg
gaggaaacctatgctgctagtcttatagagctggtcagttataccaatgagagcctaggc
aaggtgagccgcttagaagatctgtttgatgatagaattgggttaattaatgaagatgga
gagacgatctacatctttggtgatgcaggtattggaaaatccattttgctacaaaagatg
caaaatctttgggccagaggcgaattggatgtaggtgccaaatttttcttccggttcagg
tgcaggatgtttagctgttttaaggagaatgaagccatctgtttgaaggatctcctgttc
aaatacaactgttacccagatcaggaccccgaggaggtattcaaccacatcctgcacttc
cctcatacagcccttttcacatttgatggttttgatgagatccattccgactttgacctg
agcagcatccccgagatctgctcacccaaagaacctacccaccctcttgccctgttggtg
aatcttctcagcggaaaggttcttaagggatccaggaaagttctgacagcaaggacagga
actgagatccatcaaaacatcattaggaagaaagtactgctccgagggttttccagcagt
aacctgaaggaatacactaagaatttcttcagagacgaggagtgtcgggtattgatgtcg
aaccagctggaagcaaaccccagtctctgcagtttgtgttcagtgcctttgttttgttgg
attatctttaaatgctttgaactcctccgttccatgttcgacagtcatgagcttccaaac
tactcagttacactcacagatgtttttttgctcatgactgaagttcacttgaaccgaact
ctgaaaacaaatttgctgaagaagaacaccaggagccaagtggagacattcaggtcgaaa
aaggaaactctgttctctttgggtacaatagcacacatggggatggagaagtctctcttt
atctttgaccaggaggaagtcacatccttgcatgtgtcagagcaggatttgcacctggga
ttcctcaggacggttcatgactgtggtggctatggagaccagtcctcctgtgagttcttg
cacttgaccctgcagtcttttttcacagctttgttcctagttactgaagagaagttgggt
acaaaggagttactgaagtttttctcagagtgctcttccactgacactgctcactctact
tgtctccctatttcctggttgcgcaaatgccctataggagaagatcctttccgaaataaa
gaacattttcacttcaccaatcttttcctctgtggtctgctttccaaagacaaggagaag
ctcatcagacatttagtttcacctgcagccattaagaggaaaagaaatgcgctcattaca
tatctcttagaaagcatgaaatttcaaatgcagagcctgatgcgggcaagacttaagggt
tataaacagattcaggtcatgcccaattttgtttggatgctgaggtgcatttatgagact
caaagtgaaaaactagccaagctgactgtcaggggcatgagggccaactacatcaaactc
acctattgcaatgcgtattcggcagactgcagcgccatttcctttgtgatgcagcacttt
cagaagcatctgggtctggatctagacaacaataatatcaatgactatggagtaaaacaa
cttcaaccttgttttaacaagcttgcagtgatcaggctgagtgttaatcagatcacagat
catggagtaagagtactatatgatgagctctccaagtacaaaattgtgactttcctgggc
ttgtacaacaatcaaattactgatgttggagccagatacgttgcaagactcattgaagaa
tgttcaagcctcacatatgttaaaataggagcaaacaagataaccactgaaggagggaaa
tgtcttgcccttgctatccagaagagcaaaacaatgtttgaaattgggatgtggggtaac
caggtgggagatgaaggagcgaaggcgtttgcagaggcactgaggaatcaccccacctta
acaaatgtgagtcttgcattcaatggcatcacgacagagggaggcaaaagcattgctgaa
gctttgcagcacaacagcaccgtgaaaatattttggttgactaaaaatgcaatagatgac
gaagctgcaaagagctttgcagagatgctgagagtcaacaagaagctagcacatttatgg
cttatccagaatcagattacagccaaaggggccaaatacctcagtgaagctctccaggag
aacacaaccctgaaagaaatctgcttaaatgggaacctgatcaaccaagaagaggccaaa
gcctttgcagatgaagaacggattatttgcttttga
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