Lepidochelys kempii (Atlantic ridley): 140907616
Help
Entry
140907616 CDS
T11378
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140907616 (VPS50)
Membrane trafficking [BR:
lkp04131
]
Protein recycling
Others
EARP complex
140907616 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
DcpS_C
Motif
Other DBs
NCBI-GeneID:
140907616
NCBI-ProteinID:
XP_073190041
LinkDB
All DBs
Position
2:complement(223844442..224047710)
Genome browser
AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQENVHDLSPVENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELEKLPAVLSLQEMEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFRHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDRDEGTASSSV
SDGNNVIGAEETNFDHSYVQKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISATITLFEHYCNGGNPFEIQVNSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPVQSSSLPTSSREQYSARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSTDTTGTLTA
AEERKEKVPSPHLSHLVVLTSGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDT
LLKEFEQFNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcactgatgacccgccagggtctcaaaagtccacaggagaacgtt
catgacctcagtcccgttgagaattttcggattcctagcaaggaggagctgagagaactc
cgggaacaaccaaccgatcctcaagcccagcaagaaataattaacagcattgaagaagtg
tatttttccaatgattcctttgatattgtgaagtatgaattggagaagcttcctgcagtt
cttagtcttcaagaaatggaagaatacagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgttaaggaacttgaa
cgagttacatctttacaaactggtcttcagttagctgcagtcatttgcacaaatggaaga
aggcacctgaatattgcaaaggaaggttttactcaagctagtttgggacttcttgcaaat
caaagaaaacgacagttgctgattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
caattgtgcttggaatgtcagaaagcagccagtactttcagacactacagttgtataagt
gaattgaattcaaaactgcaagacactttggaacaaatagaggaacaattagatgtagcc
ctctccaaaatatgcaagaactttgatatcaatcattataccaaggtgcagcaggcttac
agactacttggaaagacacagacagcgatggaccaactacatatgcacttcactcaagcc
attcacaacacagtgttccaagtagttcttgggtacgtagagctgtgcgcaggaaactcg
gataccaaatttcagaagctacagtacaaggacctctgcacacatattacatcagacagc
tacattccatgtcttgctgacctatgcaaagcactctgggaagtcatgctcagttattat
cgaacgatggaatggcatgagaaacatgaccgagatgagggaactgcttcgtcttctgtt
tcagatggcaacaatgtgattggagctgaggagaccaattttgaccatagctatgtacaa
aagaaattagaacatggactttcacgaatatggcaggatgtgcagctgaaagtgaaaacg
tatctgctggggacagacatgtctaacttcaaatatgatgactttatctttgtactagat
atcattagcaggctgatgcaagttggggaagaattttgtggcagtaagtcagaagttttg
caagaatctattagaaaacaaagtgtgaactatttcaagaattatcacagaactcgtctt
gaagaattgcgaatgttcttggagaacgagacctgggagctttgtcctgttaagtcgagc
tttagtattttacagcttcatgaatttaaattcatggagcagtcacgttccccgtctgtg
tcgcctagtaagcagcctgcttcagcaatctcagcaaccataactttgtttgagcactat
tgtaatggaggaaatccatttgaaattcaggtcaacagcaaagatgatgagacagaagat
gtacttgcttctaatgggtatgaatctgatgaacaggagaaaagtgcctatcaagagtat
gacagtgacagtgatgttcctgaggagctgaaaagagattatgtggatgagcagacggga
gatgcccctgtaaaaagtgtttctagagaaaccctgaggagcaggaagcgatcagattat
aatctcaacaaggtgaatgcacccatcctaacaaacactacactcaatgtaataagactt
gttgggaaatacatgcagatgatgaacattttgaaaccaattgcatttgatgtgattcac
ttcatgtcccagctgtttgattactatctgtatgcagtgtatacgttttttggccgaaat
gacacgcctgtacagagttcttcacttcccacatctagcagggaacagtacagtgctagg
cagtttgaatcaacaggactgggtcttagtagtagcagactgcgcactacactaaacagg
atacaggagagcctgattgatctggaggtctctactgataccactggcaccctcacagct
gctgaagagagaaaggagaaagtgccaagcccacacctcagtcatctggtagttttaaca
tctggcaatactctgtatggtttggcagagagagtggtagccacggaatccttggtgttt
ttggctgagcagtttgagttccttcagtcgcatcttgatgctgtgatgcctgcagccaag
aaaccctttctccagcaattctactctcagactgtgtcaactgccagtgaactacggaaa
ccaatttattggattgtagctgctaaagctattgattatgaacagatgctgctcctcatg
gctaatgtgaagtgggatgtgaaggagatcatgtcacaacacaacatatatgttgatact
cttttaaaggaatttgaacagtttaacagaaggttgaatgaggtatctaaaagagtccgt
attccattgccagtgtcaaatattctttgggagcattgtatccgactagccaatagaact
attgtggaaggttatgccaatgtcaagaagtgtagcaatgaagggcgtgccctgatgcaa
ttggacttccagcagtttttaatgaagctagaaaagctaacagacattaggcctattccg
gataaggaatttgtggagacctacattaaagcttactatctgactgaaaatgacatggag
cgctggatcaaggagcacagggaatattccaccaagcagctgaccaatctggtgaatgtt
tgtctgggatcacacatcaacaaaaaagcaagacagaaactgctagcagcaattgatgac
atagacagacctaaaagataa
DBGET
integrated database retrieval system
