Lepidochelys kempii (Atlantic ridley): 140908894
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Entry
140908894 CDS
T11378
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140908894 (PRDM1)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
140908894 (PRDM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
140908894
NCBI-ProteinID:
XP_073193005
LinkDB
All DBs
Position
3:81043748..81160590
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AA seq
821 aa
AA seq
DB search
MRIKRFFFLLFQAATQCSLDVVSFQTLVKGTEWAMKMDMEDADMTLWTEADFEEKCTYIV
NDHPWDPSDDGSTITQAEASLPRNLTFKYTLNCKEVTGVVSKEYIPKGTRFGPLVGEIYT
NDTVPKNANRKYFWRIYSRGELHHFIDGFNEDKSNWMRYVNPAHSVQEQNLAACQNGMNI
YFYTIKPIPANQELLVWYCPDFAERLHYPSSRELMMNLTQSHVNPKQQSTDKNELYQKSI
PKREHSVKEILKTEPNHSKGKDLFQTNISPVTPEKHLDDLRKNCSPERSFFPRVVYPIRP
HIPEDYLKTSLLYGMERPSYITHSPIQSSTTPSPSARSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHRESYPYLNGPYGSEGLGSYPGYAPPSHLSPAFLSSYNSHYPKFLLPPYSMSCN
NLSGLNNINGINNFNLFPGMYPLYSNLLSGGSLSHHMLNPAPLPSSLPPEGGRRLLQPDH
PRDFLIPAPNSAFSITGAAASMKDKSCSPTSGSPTAGTAATSEHIMQPKPTSAVLAATSE
EAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFK
CQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLC
PAKFTQFVHLKLHKRLHTRERPHKCVHCHKSYIHLCSLKVHLKGNCPVAPASGLSMEDLN
RINEEIEKFDISDSADRLEDVEDNIDMASIVEKEILTMLRRELEGASLKVSLQRNMGNGL
ISSGCNLYESSDMSIMKLPHGHPLPLLPIKVKQETVEPMDP
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaagatttttttttcttcttttccaggctgccacacagtgtagcttggac
gttgtgagtttccaaacgctggtgaaagggacggagtgggcaatgaaaatggacatggag
gatgctgacatgactctgtggacagaggctgattttgaagagaagtgtacatacattgta
aatgatcacccctgggatcccagcgatgatggaagcaccataactcaggcggaggcgtcc
ttgccaaggaacttgactttcaaatatacattgaactgcaaagaggttactggagttgta
agtaaagagtacatccctaaaggaacacgttttggacccctggtaggagagatctatacc
aacgatacagttcccaagaacgcaaacagaaaatacttttggcggatctattccaggggt
gaacttcaccacttcattgacggatttaatgaggacaagagcaattggatgcgctatgtg
aacccagcccattctgttcaggagcagaatttggcagcttgtcagaatggaatgaacatc
tatttctacactatcaagcccatccctgccaaccaagaactacttgtgtggtattgtcca
gactttgcagagagactgcactatccttcctccagagagctgatgatgaatctcacacaa
agccacgttaatccaaagcagcaaagcactgataaaaatgagctttatcagaaaagtatc
ccaaagagagagcacagtgtgaaagaaatcctgaaaactgaacccaaccattcaaaagga
aaggacttattccagactaacatttcaccagttactccagaaaaacacttggatgacttg
agaaaaaactgtagcccggaaaggtctttctttcctcgtgttgtctatccaatccgacct
cacattccagaagattatttgaaaacttccctactttatgggatggaaagacctagttac
attactcactcacccatccagtcttctaccacaccaagtccttcagcaaggagcagccca
gaccaaagcttaaaaagctcaagccctcacagcagtccaggggttacagtttcacctctg
gcacctacttctcaagaacacagagaatcttacccatacttgaatggaccctatggctca
gaaggattggggtcttaccccggatatgcaccccctagccatctctcaccagccttttta
tcctcttataattcccactatccaaaattcctgttacctccgtacagtatgagctgtaat
aacctgagtggtttgaacaatatcaatggcatcaacaatttcaatctgttcccagggatg
tatcctctctatagcaacctactcagtggaggaagcctttcccatcacatgctgaaccca
gctcctcttccaagttcattgccacctgaaggaggccgtagattgctacaacccgatcat
ccaagagactttctcataccagcacctaacagtgccttttccatcacaggtgctgctgcc
agcatgaaagacaaatcatgcagccccaccagtgggtcccccacagctggcacagcagcc
acttcagaacacataatgcaacctaaacctacctcagcagtattggctgccaccagtgaa
gaagccatgaatctcattaaaagtaagaggaatgtgactggttacaaaacccttccatat
ccactgaagaagcagaatgggaagatcaagtatgaatgcaatgtttgctccaagaccttt
ggccagctctccaatctgaaggtccacctcagagtacatagtggagagagaccgttcaaa
tgtcagacttgcaataaagggttcactcagctggctcatctccagaagcactatctggta
cacacaggagaaaagcctcatgagtgtcaggtttgccataaacgattcagcagcactagc
aatctaaagacccatctgcgactccactctggagaaaagccttatcagtgcaagctgtgc
cctgctaaattcacccagtttgtgcacctgaagttgcacaagcgtctccataccagggaa
cggccacacaagtgtgtccactgccacaagagctatattcacctctgcagcctcaaagtc
catctgaaaggcaactgccctgtagcccctgcctctggcctctcaatggaggacctgaat
cgtattaatgaagagattgagaagttcgacatcagtgacagtgctgacaggctggaagat
gtggaggacaatatcgatatggcatccattgtcgaaaaagaaatactgaccatgctcaga
agagagctagaaggagctagtcttaaagtatctttgcagaggaacatgggaaatggactt
atctcctcaggatgtaacctttacgaatcttcagacatgtcaattatgaagttgcctcat
ggtcatccactacctctgttacctataaaggtcaagcaagaaacagttgaaccaatggac
ccttaa
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