Lepidochelys kempii (Atlantic ridley): 140909035
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Entry
140909035 CDS
T11378
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140909035 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140909035 (HBS1L)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140909035 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140909035
NCBI-ProteinID:
XP_073193464
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Position
3:complement(102822026..102966611)
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AA seq
867 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDCCISPSTAAQFIYSRRDKPSAFAERLEEEYG
YEDVQEPAKNITSNHQLTGVDQARLYSCLDQMREVLGEAVPEQVMVEAVLNSKFDVQKAL
DLVLAQDSKQNVKTKNEEAVTTGKTTKGKPRDSQSTRIDSKIVPKVTKMTVSGKKQAMGF
EVPSVIAEENGHSANTPQKRPSSEDSSVTSGIVELVSKSALPSQTIQIPEEQSTVPTPVK
KSSKTRQQIDVKAELEKRQEGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYE
QESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMI
TGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVSWQQE
RFQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTSCRSSELTEWYKGKCLLEQIDS
FKPPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITL
HDEPVDWAAAGDHVSLTLTGMDIIKINVGCIFCGLKEPIKACTRFRARVLIFNIDVPITK
GFPVLLHYQTVSEPATIRRLLSILHKSTGEVTKKKPKVLTKGQNALIELQTQRPVALELY
KDFKELGRFMLRYSGSTIAAGVVTELPEANPVSRVVSRPSLRQSNGRQSFRAFFLCGRHT
KASMEAAQLTLAIRSTLNTTRIIQQYMQHQNLAKRYRVRRRRQRGHVSDQDMDTDFSESM
GPANACIMVLMGQVHAVERRFWARETSTDWWDCIVLQVWDDSQWLRNFRMRKGTSMELCD
LLSPALRRMNTKMRAALTVEKRVAIAL
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcacaggaacgtccgaggctataactacgacgaagattttgaagatgatgat
ctttatggccaatcagtagaggatgattgttgtatttccccttcaacagctgctcagttt
atttactcaagacgtgacaaaccctcagcatttgctgagcgattagaagaagagtatggc
tatgaagatgtgcaagaacctgccaagaatattacatccaatcatcagctaactggagtt
gatcaagctcgtctttattcgtgccttgaccagatgagagaagtgctgggggaagctgta
ccagagcaggtgatggtggaagcagtgttgaatagtaaatttgatgtacagaaggctttg
gatcttgtgcttgcacaagacagtaagcaaaatgtgaagaccaagaatgaagaagctgtg
actacaggaaagacaacaaaaggaaaaccaagagattcccagtcaaccagaatcgattct
aaaattgtgccgaaagttaccaaaatgactgtgtctggaaagaaacaagctatgggattt
gaagtgccaagtgtgattgctgaagagaatggtcatagtgctaatacacctcaaaaaaga
ccatcatctgaagattccagtgtcacttctggaatagttgagttggtctctaaatcagct
cttccatcccaaacaattcagattccagaagagcagagtacagtacctactccagtgaaa
aagtccagcaagacaagacaacaaatagatgtgaaagcagagctggagaagaggcaagaa
ggaaaacagctgctgaatttagtggtcataggacatgttgatgcaggtaaaagtactcta
atgggtcatttactctaccttctgggcaacgtgaacaaacgaactatgcacaaatacgag
caggaatccaaaaaggctggcaaagcttcatttgcgtatgcatgggtcttggatgaaact
ggggaagaaagagaaaggggagtaacaatggatgtgggtatgaccaaatttgagacaaag
actaaagttattacactgatggatgctccaggacataaagatttcatcccaaatatgatc
acaggagctgcacaggctgatgtggctattttggttgtggatgctagcaggggggagttt
gaagcagggttcgagactggtggacagactcgagaacatgggttattggttcgctctctt
ggagtaacacaactggcagttgcagtcaataaaatggaccaggtcagttggcaacaggag
agatttcaggaaattaccagtaaacttggccagtttcttaaacaagctggctttaaggag
tccgatgtagcttatatccctacaagtggtcttggtggtgaaaatctagtcacaagctgt
cgatcaagtgaactcactgaatggtataagggaaaatgtttgttagaacaaattgattct
ttcaagccaccacagagatcagtggataaaccatttagattatgcgtgtctgatgttttt
aaagaccaaggatcaggattttgtgtgactggtaaaatagaagcaggatatatacagact
ggagaccgacttctggctatgcctcccaatgaaacttgcactgcaaaaggaatcacattg
catgatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggc
atggatatcatcaaaatcaatgttggctgtatattttgtggtctcaaggaacccatcaaa
gcctgcactcgtttcagagctcgagtcctcatctttaatattgatgtccccattactaaa
ggattcccggtgcttttacactatcaaactgtaagtgagcctgccactattagacgatta
ttgagtatccttcacaagagtactggcgaagtcacaaagaaaaaacctaaggtcctcact
aaaggacagaatgctttaatagaactacaaacacaaagacctgttgccctggaattgtac
aaagattttaaagaacttggaaggtttatgttacgctacagcggatccactatagctgca
ggagttgtcacagagctccctgaagccaaccctgtaagccgtgtcgtcagtcgcccctcc
ctccgtcagagcaacggcagacaatcgttccgcgccttttttctgtgcggacgccatacc
aaggcaagcatggaggccgctcagctcactttggcaattaggagcacattaaacaccaca
cgcattatccagcagtatatgcagcaccagaacctggcaaagcgataccgggtgaggagg
cgacgtcagcgcggtcacgtgagtgatcaggacatggacacagatttttctgaaagcatg
ggccctgccaatgcatgcatcatggtgctaatggggcaggttcatgctgtggaacgccga
ttctgggctcgggaaacaagcacagactggtgggactgcatagtgttgcaggtctgggac
gattcccagtggctgcgaaactttcgcatgcgtaagggcacttccatggaactttgtgac
ttgctttcccctgccctgaggcgcatgaataccaagatgagagcagccctcacagttgag
aagcgagtggcgatagccctgtga
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