Lepidochelys kempii (Atlantic ridley): 140909143
Help
Entry
140909143 CDS
T11378
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140909143 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140909143 (ARID1B)
03021 Transcription machinery [BR:
lkp03021
]
140909143 (ARID1B)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140909143 (ARID1B)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Helix-turn-helix
ARID
140909143 (ARID1B)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140909143 (ARID1B)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140909143 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140909143
NCBI-ProteinID:
XP_073193838
LinkDB
All DBs
Position
3:118534443..118939299
Genome browser
AA seq
2451 aa
AA seq
DB search
MIMAAQVAAAPAGAKNNKGKTPSLPGNLSQDLSSGGAAAAAAAGGPGPGSMLGVGDGTNS
SSLNNVDHHLLHHHNELNMANNATSAAATGNNNNNANTSSSCSSSSESALKEGGSSSGLP
SSSSSSSSSNPGSAMETGLLPNHKLKNVGGDHPAAPPHHHHAHHPHHHAHHHHAHHQHHH
HHALQQQLNQFQQQQPPPQHHPMQNNNSLGGGGGNNNNGGGGAAQPSADMEQQQHGGKDS
VLGNQAEPPPPPQQMLNKGGEEEELPSKMGEQIGGRYDHPSLGPLGGQQQQQPQSAGSGS
GNSSLGGGSGGGGGGGGPSAVGVSEFNSYYGNPAPASSATASRAGPCFDQHGGQQSPGMG
LMHPTAAPNSMDPLQNSHEGYPNSQYNHYPGYGRAGGAAAGGAGAAAAVVAAAAAAGAGG
GGYGGSSSGYGVLSSPRQQGSSMMMGPGGGASLGKAAATSGAGGFQRFSGQNQHPSGATP
TLNQLLTSPSPMMRSYGSSYPDYSNPSAPPQQQPQPQAAAAAPGSQQAAAGMGMGMGKDM
GSQYGSANPAWAAAQQRAHPAMSPGSTGQTISRTQGSPMDPMVMKRPQLYGMGNNPHSQT
QQSSPYPGQSYGPPGAQRYPMGMQGRTSGALGGIQYPQQQMPPQYGQQGVSGYCQQGQQP
YYNQQPQPQHLPPQAQYLSQAHQRYQTQQDMSQEGYGNRSQPPIASGKPNHEDLNLIQQE
RPSSLPVEVLASEDAAFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSP
FSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHP
ALSQSPMPQDRGFMAGIQRNPQISQYGPQQTGPSMSPHPSPGGQMHPGIGSFQQSNSSGT
YGPQMSQYGPQGNYSRPPTYSGVTNTSYSGPGPGMGINANSQMHGQGPSQPCGTMPLGRM
PSAGMQSRPFPGNMGSMTPNSPGMSLQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQS
RPPYIRSPAYPSQSGAGGRPMFSSQHPNYGSAQAPMMHQPDQYGQGSFPGMNQSGIMGSS
SPYTQQMNNSSGLMNPQAPPYSMAPNMVNSSTGNAPMGLADMMTPGESKLPLPLKADGKE
EGPPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKT
PSSPKSSSSTTTGEKITKVYELGSEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLDLF
RLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEE
PPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTPHG
QMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGMNMPDMMGRMPYEPNKDP
FGGIRKVPGSSEPFMAPGQMPNSGIQDIYNQTPSGAMSTMSMSQRQQFSYGSGYDRRSDH
GLGPEGSMGPPGQSNMVPSNSDPSMYSPNRYPGQQRHEPYGQQYPGQGPPSGQPPYGGHQ
PGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYSNTYSGPDRRPIQGQ
YPYPYNRERMQGPGQIQQHGIPPQMIGGPMQSSSTSEGPQQNMWPTRNDMPYPYQNRQGP
GGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSY
QTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPP
PIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINI
LLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHNTVKKDD
SQSIAVDTGKEEENDECIDYFEEEEEEEWEEEDEIEKTEGEEKSTVFATPSAIADPSERP
KQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKM
EIPPRRRAPPALNSPSKKKDLEGKGEPEELQEKSITATIDDVLSARPGALPEDSNPGSQT
ESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFV
PGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLE
VLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSP
QRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNL
AQGDVLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRA
AKALLAMARVDENRSEFLLHEGRLLDISISAVLNSMVASVICDVLFQIGQL
NT seq
7356 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaagtagcagcggctccagcgggtgcgaagaacaacaagggcaaa
accccgagtttgccgggcaacttgagccaggatctcagctcggggggagcagcagccgcc
gcagccgctgggggacctggaccgggctccatgctgggggtcggagatgggaccaacagc
agcagcctgaataatgtagatcaccatctcctgcaccaccataatgaactgaacatggcc
aataatgcaacttctgctgctgccaccggtaataacaacaacaacgctaacaccagcagt
agctgcagctcctcttcggagtcggctctgaaagaaggtggaagctcatcggggttaccg
tcttcttcttcttcttcctcctcctccaacccgggctcggccatggagacggggctgctc
cccaaccacaaactgaaaaacgttggaggcgatcaccctgctgcacctccccaccaccac
catgcccaccaccctcatcaccatgcccaccaccaccatgcccaccaccagcaccaccac
caccatgcactacagcagcaactaaatcaattccagcagcagcagccgccgcctcagcac
catccgatgcagaataacaacagcctcggcggcggcggcggcaacaacaacaacggcggt
ggcggcgctgctcagcccagtgcagacatggagcagcagcaacatggaggaaaagacagt
gttttgggaaatcaggccgagcccccgccgccgccgcagcaaatgctgaataaagggggc
gaggaggaagagctgcccagcaaaatgggagagcagatcggcggccgctacgatcacccc
agcttgggacctttgggcgggcagcagcagcagcagccccaaagcgctgggagcggcagc
ggcaatagtagcctcggcggcgggagcgggggagggggaggcggcggcggcccctccgcg
gtgggtgtctcggagtttaacagctattacggcaaccctgctcctgccagcagcgctaca
gcgagccgagccgggccttgctttgatcaacatggcggacaacaaagccccgggatgggg
ctgatgcaccccacggcggcccccaacagcatggaccccctgcagaactcccacgagggt
taccccaacagccagtacaaccactaccctggctacggccgggccggcggcgccgcagcg
ggcggagcaggagcggcggcggcggtggtagcagccgcggctgcagcaggagctggagga
ggcggctatgggggctcgtcctctggctacggggtgctgagctccccccggcagcagggc
agcagcatgatgatgggcccaggtggaggggccagccttggcaaggctgctgcgacttct
ggggctggaggctttcagagattttccgggcagaaccagcacccgtccggggccacccct
accttgaaccagctgctcacttcccccagccccatgatgaggagctatggcagcagctac
cctgattacagcaaccccagtgccccaccacagcagcagccacaaccccaggcagcggcg
gcagccccaggaagccagcaggcagcagcgggcatgggcatgggcatgggcaaagacatg
ggctcccagtatggatctgcaaacccagcctgggcagcagcacaacaaagagctcatcca
gctatgagccctggaagcactggtcagaccatcagcagaacccagggcagcccaatggat
ccaatggtaatgaagagacctcagttgtatggaatgggcaataaccctcattcccagaca
cagcaaagcagtccatacccggggcagtcatatggccctccaggagctcaacgatatcca
atgggaatgcagggacggacctcgggagccctgggaggaatacagtatccacagcaacag
atgccgcctcagtatggtcagcaaggggtaagtggctactgccaacagggccaacagcca
tattacaaccagcaaccgcaacctcagcatctgccaccccaggcacagtatctgtcgcag
gcccaccagaggtaccagactcagcaggacatgtctcaggaaggctatggaaacagatcc
caaccccctatagcctcaggaaagcctaaccatgaagacttaaacctaatacaacaagaa
agaccatcaagcttaccagttgaagtcttggcctcggaggatgctgcatttggactgaag
gatttatccggctccattgatgacctgcccactggaactgaagcaacactgagttcagca
gttagtgcgtcaggttctacaagcagccagggagagcagagtaaccctgcacagtcgcct
ttctcccctcatgcctccccacatctctctggcatcccaggcggtccatcaccttcccct
gtaggctctcctgttggaagcaaccaatcaagatctggtccaatttctcctgcaagtatt
ccaggtagtcaaatgccacctcagcctcctggtagccaatcagaatccagctcccatcct
gccttgagccagtcaccaatgccacaagatcgaggttttatggcaggcatacaaaggaac
ccacaaatatcccaatatggacctcaacaaacagggccttccatgtcaccacatccttca
cctggaggccaaatgcatcctgggattggtagtttccagcagagtaattcaagtggtact
tatgggcctcagatgagccagtatggaccacaaggaaactactccagaccgccaacatac
agtggggtgactaacacaagttacagtggcccaggacccggcatgggtataaatgccaat
agtcagatgcatggacaggggccaagccagccatgtggtaccatgcccctaggacggatg
ccatcagctgggatgcaaagcagaccatttcctggaaacatgggcagtatgacccccaat
tctcctggcatgtctctgcagggaggccctgggatgggcccacccatgccaactgtgaac
cgtaaggcacaggaggcagctgctgcagtgatgcaggctgctgcaaactccgctcagagc
aggccaccatacattaggtcgcctgcttatcccagccagtctggggctggcggacgcccc
atgttttcttcacagcaccccaactatggcagcgctcaggctcccatgatgcaccagcct
gaccagtacgggcaaggcagttttcctggcatgaatcagagtggtattatgggatccagt
tctccctacacgcagcagatgaacaacagctctggcctgatgaacccacaagctcctcct
tacagcatggcacctaacatggtgaacagttcaacaggtaatgcacctatgggtcttgca
gatatgatgacacctggtgagtccaaactgccccttcctctcaaagcagatggcaaagaa
gaaggacccccacagcccgagagcaagtcaaaggatagctacagctctcagggtatttct
cagcccccaaccccaggcaacctgccagtcccttccccaatgtccccaagctctgctagc
atctcctcatttcatggagatgaaagtgatagcattagcagcccaggctggccaaagact
ccatcaagccctaaatcaagttcctccaccacaactggagaaaagatcacaaaagtctat
gagctgggaagtgagccagagcgcaagatgtgggtggatcgatacctcaccttcatggaa
gaaaggggcacgcctgtggccagtctgccggctgtaggcaagaagccactggacctgttc
aggctttatgtctgtgtcaaagagatcggaggtttagcacaggttaataaaaacaagaag
tggcgcgagttggcaaccaacctgaatgttggcacttcaagcagcgcagccagctccctg
aaaaaacagtatattcagtacctgtttgcctttgagtgtaagattgaacgaggggaggag
ccccctccagaggtcttcagcactggagatactaagaaacaacctaagattcagccgcca
tctcctgctaattctggttccctacaaggtccacagactcctcagtctactggtagtaat
tccatgacagaagtgccaggcgacctgaagcctccaacaccagcatcaacacctcatgga
cagatgacgcccatgcagggcggcagaaacagtgctgttagtgtgcacgatcccttttct
gatgtaagtgattccgcattcccgaagcgaaactccatgacgccaaatgcaccataccag
caggggatgaacatgccagatatgatgggaaggatgccctatgaaccgaataaggaccct
tttggtgggataagaaaagtgcctggaagcagtgagcccttcatggcccccggacaaatg
cccaatagtggaatacaggatatctataaccagactccatctggagcaatgtccaccatg
agcatgagccagcggcagcagttctcttatggaagtggctatgacaggaggtcggatcat
gggctgggtcctgaaggcagtatgggaccacctggtcagagcaacatggtgccttcaaac
agtgacccaagcatgtactctcctaatcgttaccctggccagcagaggcatgaaccatat
gggcagcagtatccagggcaaggacctccttcaggacaaccaccgtatggaggacatcaa
cctggaatgtatccacagcagcagaactataaacgtcatatggatggcatgtatgggcct
ccagcaaaacgccatgaaggggatatgtataacatgcagtatggcaatcagcagcaagaa
atgtataaccagtacagtaacacttactctggaccagacaggaggcctatccagggacag
tatccatatccttataacagggagaggatgcaaggccccggacaaatccagcagcatgga
atacccccgcagatgattggtggccccatgcagtcatcatccaccagcgaaggtcctcag
cagaacatgtggccaacacgaaatgatatgccttacccttaccagaacaggcaaggccct
ggaggccctgcacaggctccaccctatccagggatgaaccgcactgatgatatgatggta
cctgaccagaggataaaccatgagagtcagtggccttctcatgtcaaccaacgtcagcct
tcttacatgtcatcctcagcctccatgcagcctatcactcgacctcctcagtcatcctac
cagacaccaccctcaatgccaaaccacatctctagggctccaagtccagcatccttccag
cgctctttagagaaccgtatgtctccaagcaagtctcctttcttaccctctatgaagatg
cagaaggttatacccacagttccagtgtcacaagtcacaggacctccaccccagccacca
ccaattaggcgagaaattacttttcctccaggctctgtagaagcatcgcaaccagtctta
aaaccaagacgaaagattacctcaaaagatattgtaactcctgaggcctggcgagtgatg
atgtctcttaaatctggccttttggctgaaagtacctgggctctagacactattaatatt
cttctgtatgatgacagcactgttgctactttcaacctttcgcagttatctggatttctt
gagcttttggtagaatatttcagaaaatgcctgattgacatttttggaatccttatggaa
tatgaagtgggagatccaggtcacaaagcacttgatcacaacacagtcaagaaggatgac
agccagtccatagcagtggatactggaaaagaggaggaaaatgatgaatgtattgactac
tttgaggaagaggaggaggaagagtgggaggaggaagatgaaatagaaaaaacagaagga
gaagaaaagagcactgtttttgccactcccagtgccattgctgatccaagtgagaggcca
aaacaagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctattt
gttgttgacagatctgacaaactggggcgtgttcaggaattcaacagtgggcttctccac
tggcagcttggtgggggtgatacaactgaacacatccagactcactttgagagcaagatg
gagattcctccacgaaggagggcccctccggccttgaactctccaagcaaaaagaaggat
ctagaggggaaaggtgaacccgaagaactacaggaaaaaagtataacagctaccatcgat
gatgtcctgtcagctcgaccaggagcattgcccgaagactcaaaccctggttcccagaca
gagagcagtaaatttccctttggaatccatcaagccaaaagccaccggaatattaaactg
ctagaagatgagccaaggagtcgggatgagactcctctatgcaccataactcattggcaa
gactccttggctaaacgctgcatctgtgtgtcaaatattgtccgtagcttgtcttttgtg
cctggcaatgacgccgaaatgtccaaacatccaggcttggtgctgatcctgggaaagttg
atcctccttcaccatgagcatccggaaagaaagcgagcgccgcagacatatgagaaagag
gaagaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgag
gtcttgagggataatacattggtcacattagccaacatttctgggcagctagacttgtct
gcttatacagaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgc
ccatctgcagaggcacaggatccttttccaaccgtggggcccaactcagtcctatcgcct
caaagacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtggacctt
atcttggccactcccccattcagtcgtcaggagaaactctacgctactttagttaggtac
gttggggaccgcaaaaacccagtctgccgagaaatgtccatggctctcttatcgaacctt
gcccagggggacgtgttagcagcaagggcaatagctgtgcagaagggaagcattggaaat
ttgataagtttcttggaggatggggtcactatggcccagtaccaacagagccagcataac
ctcatgcacatgcagcctccacctctggagccacctagcgtagacatgatgtgcagggca
gccaaggccttgctagccatggctagagtggacgagaaccgctcagagttccttttgcat
gagggtcgtttgctggatatctcaatatctgctgtcctgaactctatggttgcatctgtc
atctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
