Lepidochelys kempii (Atlantic ridley): 140909413
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Entry
140909413 CDS
T11378
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140909413 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lkp03009
]
140909413 (WDR43)
Ribosome biogenesis [BR:
lkp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
140909413 (WDR43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
Paf1
Beta-prop_VPS8
DUF6235
UTP15_C
Methyltrans_Mon_3rd
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
140909413
NCBI-ProteinID:
XP_073194724
LinkDB
All DBs
Position
3:154553530..154589028
Genome browser
AA seq
692 aa
AA seq
DB search
MAAAGAACGGDAPRAPCAFSPRGRRSLALCGPDGRLRVWDTPSSRLQHEYVPSAHLSASC
TCLAWAPPGGRQPPSKEGPQRKKRKSEAAEAGEQFDLLAIGTAVGSILLYSTVKGELQSK
LDGGHDNRINCVRWHQDNGCLYSCSEDKHIVEWNTQTCKVKCKWKGDNSSVSCLCISPDG
KMLLSAGRTIKLWDLETKEVYRNFTGHATAVSSLMFTTVRPPNESQPFDGITGLYFLSGA
ARDRLLSVWQIRSDRKDKNAVMSFTVTDEPVFIDLTVSESKEEPVKLAVVCRDGQLHLFE
HILNGYCKKPLTSNCTIQIATSGKDSDATPKPVPILAAAFCSDKQSLLLVYGNTLQPIIE
RVSLNTAESHVCLIRDVQKTMALQTEMSVTKVKTPIVNKEAKVLVPGIPGHSATIKSQSS
GMQKMESKRKPGDKEDSIEDRLGAMDIDTVKIKTKGGLPQTDSFAVLLVQGLESNDPDIL
NKVLQTRKDALIKNTIAKIPVHAVIPLLHEITKRLQGHPYSASQMVRWLKSVFTIHASYL
STLPDLVPQLGMLYQLMESRVKTLQKLSRLHGKLYLIITQVAALEKIQDATNINQTAKLV
YEEESSEDGSEDEMIADKDSDENWDEDEEKGEQSDEEKGEQSDEEKGEQSDEEKGEQSDE
EKGEQSDEREMAVEKEINGESDLDPENESEEE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggagcagcgtgtggcggggacgccccgcgggccccctgcgccttctcc
ccgcgcggccgccgctccctggcgctgtgcggccccgacgggcgcctgcgggtgtgggac
acaccgagcagccgcctgcagcacgagtacgtgccctccgcccacctcagcgcctcctgc
acctgcctggcctgggccccaccggggggccgccagcccccgagcaaggagggtcctcag
aggaaaaaaaggaaatctgaagctgcagaagctggtgaacagtttgacctgttggctatt
ggtacagcggttggcagtattttattatacagcacagttaaaggagaattacagagcaaa
ctagatggtggtcacgacaatagaataaactgtgtacggtggcaccaggacaatggttgt
ttatatagttgttcagaagacaaacacattgtggaatggaacacacagacctgcaaagtg
aagtgcaaatggaaaggagacaacagcagtgttagctgcctgtgcatcagcccagatgga
aagatgttactttcagctggtcgaactatcaaattgtgggacctggagaccaaagaagtc
tacagaaatttcacaggccatgcaacagcagtttcatcattaatgttcaccacggtacga
cctccgaatgaaagtcagcccttcgatggaattacaggactctatttcttgtctggagca
gcacgtgaccggttactcagtgtatggcagatcagatcagataggaaagacaagaatgct
gtgatgtcttttactgttacagatgagccagtctttattgacctaacagtgtcagaaagc
aaagaggagccggtgaagttagcagttgtatgcagagatggacagttgcatttatttgaa
cacatcttaaatggatactgcaaaaagcccttaacatcaaattgtactatccagatagca
acgtctggaaaggacagtgatgccacaccaaaaccagtccctattctagcagctgcattt
tgctccgacaagcagtcgttactgcttgtgtatggaaacaccttacaacccatcattgag
agagtgtccttgaacaccgctgaatctcatgtatgcttgataagggacgttcaaaagacc
atggcacttcaaacagaaatgtctgtaacaaaggtaaaaacgcccattgtgaacaaagaa
gccaaagttttagtgcctggaattcctggacatagtgcaaccatcaaatctcagtcctct
ggaatgcagaaaatggaaagcaaaagaaaacctggagataaagaggatagcattgaagac
cgtcttggtgcaatggatattgacactgtgaaaataaaaacaaaaggtggccttccacaa
actgacagctttgcagtgcttttggttcagggcttggaaagcaatgatcctgatatctta
aataaagtacttcaaacaaggaaggacgctttaataaagaacacaatagctaaaatacct
gtacatgctgtcattccattgctgcatgagattacaaagaggttgcaaggccacccgtac
agtgcctctcagatggtccggtggttaaagtctgttttcactattcatgcatcctacctt
tccacattgccagacctggttccccagttgggtatgctatatcagttaatggagagcaga
gtaaaaacattgcagaagctctctcgcctccatggaaaactctatcttatcatcacccag
gttgcagcactggaaaaaattcaggatgcaactaatattaatcagactgcaaaactagtg
tatgaggaagaatcctctgaggatggttctgaagatgagatgattgcagataaagattct
gatgagaactgggatgaagatgaagagaaaggggagcaatcagatgaagagaaaggggag
caatcagatgaagagaaaggggagcaatcagatgaagagaaaggggagcaatcagatgaa
gagaaaggggagcaatcagatgaacgagaaatggctgttgaaaaagaaatcaatggggaa
tctgatttggacccagaaaatgaaagtgaagaagaataa
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