Lepidochelys kempii (Atlantic ridley): 140909578
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Entry
140909578 CDS
T11378
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04517
IgSF CAM signaling
lkp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140909578 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140909578 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lkp04812
]
140909578 (SPTBN1)
Cytoskeleton proteins [BR:
lkp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
140909578 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
140909578 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
140909578
NCBI-ProteinID:
XP_073195257
LinkDB
All DBs
Position
3:complement(178655512..178870004)
Genome browser
AA seq
2361 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERQARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIVRLLSKHKAFEDEMSGRSGNFQQAIKEGEDMIAEEHFGSEKIRERIK
DMREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMEIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLTGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIRKQEDFMTTMDANEEKLNAVVETGRRLFSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETETVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNSLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQ
SQAQALSQEGKSTDEVDGKRLIVQKKFLELLEPLTERKTNLLASKEVHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNVITDSSLNAE
ALQQRLADLQQLWNLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPKVPEDADSQQWDGTKGEQVSQNGLPSDQESPRMAETVEANEMVNGAAEQRTSSK
ESSPVPSPTADRKAKTAIQAQTAATLPAKTQETPSAQMEGFLHRKHEWETHNKKASNRSW
HNVYCVINNQEMGFYKDSKAAASGIPYHSEIPISLKEAVCEIAVDYKKKKHVFKLRLTDG
NEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPSTQSTPASSRAQTLPASVTITSESSPG
KREKDKEKDKEKRFSLFGKKK
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacagtagcgacagactatgacaatattgaaatccaacagcaatacagtgat
gtgaataaccgctgggatgttgatgactgggacaatgaaaatagttctgcacgactgttt
gagcgatcccgtattaaggctctagctgatgaacgagaggcagttcagaagaagactttc
acaaagtgggttaattcacatttggcacgtgtatcatgtagaattacagatttatacact
gatcttcgtgatggacggatgcttatcaaactgctggaagttctttcaggagaaagactt
cccaaaccaaccaagggaaggatgcgcatccattgtttggagaatgttgataaagccctc
cagtttctgaaagaacaaagagtgcatctagaaaacatgggatcccatgatattgtggat
gggaatcacaggctgactcttggccttatttggaccattattctgagattccagatccaa
gatatcagtgtcgaaacggaagacaacaaagagaagaaatctgctaaggatgctttgctc
ctgtggtgccagatgaagacagctggttaccccaacgtcaacattcacaactttaccact
agctggagggatgggatggctttcaacgcactaatccataaacacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctg
gcagagcaacaccttggtctcactaagcttctggacccagaggatatcagtgttgaccat
cctgatgaaaagtcaattatcacctatgtggtgacatattaccactacttttctaagatg
aaagctttagctgttgaaggaaaacgtattggaaaggtgcttgacaatgctattgaaaca
gagaaaatgattgaaaaatatgaatcgctggcttctgaccttcttgagtggattgaacaa
acgattatcatcctgaacaatcgcaaatttgccaactcactggttggtgtgcaacagcag
ctacaggcattcaacacttaccgcacagtggagaaaccacctaaatttacagaaaaagga
aacttagaagtactgcttttcaccatccaaagcaaaatgagggctaacaatcagaaagta
tacatgccacgggagggcaaactcatctcggacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcataagacaagagaaactg
gaacaacttgcacggagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctggtttctcaggataactttggttttgaccttccagccgtggaggctgcc
actaaaaaacacgaggccattgaaacagacattgctgcatatgaagaacgagtccaggcg
gtggttgctgttgcaaaggaacttgagactgagaattaccatgatatcaaacgcatcact
gcaagaaaagacaatgttatacgcctgtgggagtacctgctggagctactcagggcacgt
agacaaagactggagatgaaccttggtctgcaaaagatattccaggaaatgctttacatt
atggactggatggatgaaatgaaggtgcttctgctatctcaagactatggcaagcatttg
ttaggggtagaagacctgttacagaagcatgcgctggtggaggcagacattgccattcag
gctgaaagagtgcggggagtcaatgcatctgctcagaaatttgccacagatggagaaggt
tacaaaccgtgtgatccacaagttatcagagatcgtgtagctcatatggagttttgttac
caagagctatgccagttagcagccgaacgccaagctcgcttggaagaatccaggcgtctg
tggaaattcttctgggaaatggcagaagaagagggctggatcagagaaaaggagcagatc
ttgtcatctgatgactatgggaaggacctaactagcattgtccgtctcttgagcaagcat
aaggcatttgaagatgaaatgagtggccgtagtggcaacttccagcaggcaataaaagaa
ggtgaagatatgattgctgaggagcactttgggtctgaaaaaattagagagagaattaag
gatatgcgagagcaatgggctaacctggagcagctgtctgccattaggaagaaacgcctg
gaggaagcctctcttcttcatcagttccaagctgatgctgatgatattgatgcatggatg
ttggacatcctcaaaattgtctccagcaatgatgttggtcacgatgagtattctactcag
tccttggtcaagaaacacaaagatgttgctgaagagattgcaaactataggccaaccatt
gactcactgcatgagcaagcaaaagctctgcctcaggaacacgccgaatctccagatgtt
caaggcaggttgtctggaatagaggaaagatacaaagaggtcgctgaactgacacggctc
cgtaaacaagctctacaagatacccttgctctgtataagatgttcagtgaagcagatgct
tgtgaactttggattgatgaaaaggagcagtggctcaacaatatggagattccagagaag
cttgaagacctggaagtgatccaacacagatttgaaagcttagaaccagaaatgaacaat
caggcatcccgtgttgcagtggtaaatcaaattgctagacagctgatgcacagtggtcat
ccaagtgaaaaggagatcaaggctcagcaagacaaactcaatacaagatggagccagttc
agggaactggtagacagaaagaaagatgctcttatctctgctctgagtatccagaattac
catcttgagtgtaatgaaaccaaatcctggatcagggaaaagaccaaagtaattgaatcc
acacaagatctgggcaatgatctgactggagtaatggcccttcagagaaagttgacgggt
atggaacgtgatttggtagccattgaggctaagctaagtgacctgcaaaaagaggctgaa
aagttggaatctgaacatcctgaccaagctcaggccatcctgtcgaggcttgcagaaatc
agcgatgtgtgggaagaaatgaaaactaccctcaagaaccgggaagagtcccttggagag
gcaagcaaactacagcagtttttgcgtgacctggacgacttccagtcctggctatccaga
acccagactgcgattgcctcagaagacatgccaaacacactgactgaggctgagaagctg
ctcactcagcatgagaatattaagaatgaaatcaacaattatgaggaagactaccagaaa
atgagagacatgggcgagatggtaacccaaggacaaaccgatgcacagtatatgttctta
cgccagcgcctgcaggctttggacactgggtggaatgagcttcacaaaatgtgggagaat
aggcaaaacctcctttcacagtctcacgcctaccagctgtttctcagagacactaagcaa
gctgaagcatttcttaataaccaggaatatgttttggcccatactgaaatgcccactacc
ttggaaggagcagaagctgctattagaaaacaggaggatttcatgaccacaatggatgcc
aatgaggaaaagctcaatgcagttgtcgaaactggcaggaggctctttagcgatgggaac
attaactctgacaagatccaagagaaagtggactctattgatgacagacataggaagaat
cgtgaggccgccagtgagcttctgatgaggttgaaagacaacagagatcttcaaaagttt
cttcaggactgccaggagctgtcactctggatcaatgagaagatgctcacagcccaggat
atgtcttatgatgaagcaaggaatctgcacagtaaatggctaaaacaccaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaaaattgaaaaggaagggatgcagctc
attgcggagaaaccagagactgaaaccgtagtgaaggaaaaactgacaggcctgcatcaa
atgtgggaggagctcgaatctactacccaaaccaaggctcagcgactctttgatgcgaat
aaagctgagcttttcacccagagttgtgctgatttggataaatggctgaacagcttggag
agtcagatacagtccgatgactatggaaaagatctcaccagtgtcaacatcctgttgaaa
aaacaacagatgcttgaaaaccaaatggatgttcgtaagaaggaggtagaggagctgcaa
agccaggcccaggctttgagtcaggagggcaagagtactgatgaggtagatggcaaacgc
cttattgtacagaagaaatttttggagctactggaacccttgactgaaaggaaaacgaac
ctgctggcctccaaagaggtccaccagttcaaccgagatgttgaggatgaaattctgtgg
gtcggagagaggatgcctatagcaacatctaccgatcatggacataacctccagaccgtg
cagctactgataaagaaaaatcagacacttcagaaggaaatccaaggacatcagcctcgt
atcgatgacatttttgagaggagccaaaacgttattacagacagcagccttaatgctgaa
gcgcttcagcagagacttgcagacttgcaacagctgtggaatctgctaattgaggagaca
gagaaacgccacaagcgcctggaggagtctcacaaagcacagcagtattactttgatgct
gcagaggctgaggcgtggatgagcgagcaggaactctatatgatgtcggaagaaaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaggcagta
gaagactatgccgagacagtgcaccagctttccaagactagcagaactttggttgcagac
aatcacccggaaagcgagcgcatcagtatgcgccagtccaaggtggataagctgtatgca
ggcctgaaggatctagctgaagagaggaggggcaaactagatgagagacacaggctattt
cagctcaatcgtgaggtggatgacttggagcagtggattgctgaaagggaggtggtggca
ggatcccacgagctgggacaggattatgaacatgttacaatgttacaagagcgattccgt
gaatttgcccgggacactggaaacattggacaggagcgtgttgatactgttaaccacatg
gcagatgagctcatcaattctggacactccgatgcagccaccattgcagagtggaaggat
ggtctcaatgaggcatgggctgacctcttggagctcattgacacaagaacacagattcta
gcagcctcttatgaactacataaattttaccatgatgccaaggagatctttggacgtatt
caagataaacacaagaaactgcccgaggaacttggtagagaccaaaacacagtggaagca
ctacagaggatgcacacaacatttgaacatgatattcaggctttaggcacccaggtgaga
cagctgcaagaggacgctgcacgccttcaggctgcctatgctggggacaaggctgatgac
atccagaagcgggagaacgaggtcctggaagcatggaaagcattgctggatgcctgcgag
ggacgcagggttagactggtggatacaggagataaatttcgtttcttcagcatggttcgt
gatctcatgctctggatggaagatgttatccggcagatcgaagcccaagagaagccaagg
gatgtttcatctgttgaattactaatgaacaatcaccagggtatcaaagcagaaattgac
gcccgtaacgacagctttactacgtgcattgagcttggcaaatctcttctggcaaggaaa
cactatgcatcagaagagatcaaggaaaagttattgcagttgacagagaagagaaaagaa
atgattgacaaatgggaagacagatgggaatggctgagactgattctggaagtacatcag
ttctcaagggatgctagtgtggctgaggcctggctgctgggacaggagccatacctatcc
agtcgtgagataggtcaaagtgtggatgaagtggaaaagttaattaagcggcatgaagcg
tttgaaaaatctgcagctacttgggatgaaagattttcagcactggaaagactgactaca
ctggaattactggaagtacgtcgacagcaagaggaagaggaaagaaagaggcagcctcct
tccccagagccaagcccaaaggttccagaagatgcagattcacaacaatgggatggtaca
aaaggagaacaggtttcccaaaatggtttaccttcagaccaggagtctccacggatggcg
gaaactgtggaagcaaatgaaatggtcaatggagctgcagaacagaggacaagttccaaa
gagtctagtcctgttccttccccaactgcagaccgcaaagccaagactgccattcaggct
cagactgcggctaccctaccagccaaaacacaagagactccttcagctcagatggagggc
tttttgcatcgtaaacatgaatgggagacgcataacaagaaagcctcaaacagatcttgg
cacaatgtgtactgtgttataaacaaccaagagatgggcttctacaaagattccaaggct
gctgcttctggcattccctaccacagtgagatccccatcagcttgaaagaagcagtctgt
gaaatagcggttgattacaaaaagaagaaacacgtgttcaagctaagattaactgatggc
aatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggattcaggccatc
acatcagctatctcctctgacaaaattgaagtgtctccaagcacacaaagcactccagct
tctagtcgtgcccaaaccctgccagccagtgttacaataaccagcgaatctagtcctggc
aagcgggagaaagacaaagagaaagacaaagaaaagagattcagcctttttggcaaaaag
aagtga
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integrated database retrieval system
