Lepidochelys kempii (Atlantic ridley): 140909808
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Entry
140909808 CDS
T11378
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03013
Nucleocytoplasmic transport
lkp03015
mRNA surveillance pathway
lkp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140909808 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
140909808 (EIF4A3)
03015 mRNA surveillance pathway
140909808 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140909808 (EIF4A3)
03041 Spliceosome [BR:
lkp03041
]
140909808 (EIF4A3)
03009 Ribosome biogenesis [BR:
lkp03009
]
140909808 (EIF4A3)
03012 Translation factors [BR:
lkp03012
]
140909808 (EIF4A3)
Enzymes [BR:
lkp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140909808 (EIF4A3)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140909808 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
140909808 (EIF4A3)
Spliceosome [BR:
lkp03041
]
Complex C
Other components
EJC/TREX
140909808 (EIF4A3)
Ribosome biogenesis [BR:
lkp03009
]
Eukaryotic type
90S particles
Helicases
140909808 (EIF4A3)
Translation factors [BR:
lkp03012
]
Eukaryotic type
Initiation factors
eIF-4
140909808 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140909808
NCBI-ProteinID:
XP_073196070
LinkDB
All DBs
Position
3:209990187..210006376
Genome browser
AA seq
409 aa
AA seq
DB search
MSGAAGAAGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPS
AIQQRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAVQI
QKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIK
MLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANF
TVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYI
HRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgcggcaggcgcggcgggctcggcccgcaagcggctgctgaaggaggaggac
atgaccaaggtggagttcgagaccagcgaggaggtggacgtgacccccaccttcgacacc
atggggctgcgcgaggacctgctgcgcggcatctacgcctacggctttgagaaaccgtca
gctattcagcagagggcgatcaaacagattatcaaaggaagggacgtgattgcacagtca
caatctggaacaggcaaaacagcaacattttgcatctctgttctacagtgtttagatatt
caggttcgtgaaacccaggcattgatcttagcaccaacaagagagttggcagtacagatt
caaaagggccttcttgctcttggtgactacatgaatgtacagtgtcatgcctgtattgga
ggcacaaatgttggtgaagatatccggaaattggattacggacaacatgtcgttgctggc
acaccaggccgtgtgttcgatatgattcgtcgtcgaagtttaaggactcgtgccatcaaa
atgttggttttggatgaagctgatgagatgctcaataaaggttttaaagaacagatttat
gatgtgtacagatacctgcccccagctactcaggtggttctaatcagtgctaccttgcct
catgaaatcctggagatgaccaataaattcatgactgacccaatccgcatcttggttaaa
cgtgatgaattaactctggaaggaatcaaacagttttttgtggccgtggaaagggaagag
tggaagtttgatacactgtgcgatctgtacgacacactcactatcacgcaggctgtcatc
ttctgtaacaccaagaggaaggtagactggctaacggagaagatgagagaagccaacttc
acggtgtcctcaatgcatggtgatatgccacagaaggagagggaatccatcatgaaggag
ttcagatctggggcaagccgcgtgcttatttctacagatgtttgggccagggggttggac
gttcctcaggtgtccctgatcattaactacgacttgcccaacaacagagaactgtatata
cacagaattggtagatcaggtcggtatggccgaaaaggtgttgccatcaactttgtaaag
aatgatgacatccgtatcctgcgtgatattgaacagtactactctacccagattgatgag
atgcccatgaacgttgctgatcttatttaa
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