Lepidochelys kempii (Atlantic ridley): 140909964
Help
Entry
140909964 CDS
T11378
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
140909964 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140909964 (SPATA13)
Membrane trafficking [BR:
lkp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
140909964 (SPATA13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
DUF5560
Motif
Other DBs
NCBI-GeneID:
140909964
NCBI-ProteinID:
XP_073196164
LinkDB
All DBs
Position
1:complement(41791085..41922514)
Genome browser
AA seq
1269 aa
AA seq
DB search
MTTFQNGCGNGTTVTCIVMDNKEPRSITSHGGCNSDTKTEEEIQDDNLSPSKIMRFFSAP
RKRTTANSERPRSLIVMGSSSTWNALSSIRKMGSFKKLKSSVLQGIQARESSDVLNENTV
GKHVSNGGVVRVQTNRYSYSGPLHDFHNAVDGLASDCSDVEESDDSFLRNTHRSRSIRRA
YGVGRINLLDTDKIQSQQNCTRPTSPITQEPKICEILVKDPENNRIIYRRSKSTDNLNFL
KKSSFKRKSTSNLTDLKIASEKQVPQRTVSTSFADSDKASGNPERRSKRWKSPIRAKDFD
RVLKLVSNVTDVAWKKDGPKSMMTPVNEQNQRTRPNSRLHDDYSRRVSSSNENDRRRCIS
PVCSPDSIFSGTPHLHSPTVSQDTDTETNVFTGETDTLRTLSCVLDDVSSSHAFDNLNAL
PNEVFYVDSDEPKSSSQFMCESEQPSIPLRPTAPKPQSPSAEKVKCNINFHCPDRHSTLS
LSSMESEERVELPAPKLGRNPVCFQDSVQTGYYDDGNEDSGISSHSQLSLNLASGTEEKK
EEVVVDDQWRMSPSQDEERTDAQKFTPRRWGSGKRSRPRPLSDYGQLAIRSFSIPEDSVA
VESQKTDCVDGESQPGFASVESTAQISTVGHQRGRKRRPISLIGGISFYGNSQTEEIEDL
LTQPITRPPVPAHQVPPYKAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNVVTDGGTES
SALVDDNGSEEDYSYEELCQPSPRYLQPGGEQLAINELISDGSMVYAEALWDHVTMDDQE
LGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEELPENCGSIQDEEQHAD
ASKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTTAQLNTI
FGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPSACLEL
SNLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTEVHSDYN
NIQAAYEAMKNVACLINERKRRLESIDKIACWQVSIVDWEGQDVLARSSELIHSGELTKI
SKQGKSQQRIFFLFDHQLVFCKKDLLRRDMLYYKGRIDLDEMELVDIEDGKDKDFNINIK
NAFKTVNRATEEVHLFCAKKQEDKKRWLEACENERRRVQEDKEMGMEISENQKKQAMQNA
RRSRHGKIKGISYNGCPMPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKRKPSLFWHT
FNKLTPFKK
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttcagaatggctgtggaaatggcaccactgttacctgtatagtaatggat
aataaagaaccaagaagtataactagccatgggggatgcaatagcgacaccaaaactgaa
gaggaaatacaagatgacaatctcagcccttcaaaaatcatgcgctttttctctgcccct
aggaaacgaactaccgccaactccgaaaggcctcgttctctgattgtgatgggcagctct
tcaacgtggaatgctttgtcgtccattagaaaaatgggatcgttcaagaaattaaaatct
tcagttcttcaaggaattcaggccagagaaagctcagatgtcttaaatgagaacactgtg
ggaaaacatgtctcgaatggtggagtggtgagagttcagactaaccggtattcttattcg
gggcctttacatgatttccataatgcagtggatggtttggcttctgattgctctgatgta
gaggaaagtgatgattccttcctgaggaacactcaccgatcacgcagtatcagacgcgcc
tatggtgttggccgcatcaatttattagacactgataaaattcagagtcagcagaactgc
accaggccaacatctcccatcacccaggagccaaagatctgtgaaattttagtgaaagat
cctgaaaacaacaggattatctacaggagaagcaaaagcacagataacttaaactttttg
aaaaagagctcattcaaacgaaagtccacctcaaatctcactgacctcaagattgcaagt
gaaaagcaagtgccacaaaggacagtaagcacttcctttgctgactcggacaaagccagt
ggaaacccagagagacggtcaaaacgctggaagagccctatcagagcaaaggattttgac
agagttttgaaacttgtaagcaatgttacagatgttgcatggaaaaaagatggtcctaag
agcatgatgactcctgtgaacgaacaaaaccagagaacaaggccaaacagcagactacat
gatgactattcccgcagggtttctagtagcaatgaaaatgacagacggaggtgcatttcc
cctgtgtgcagtccagattctatcttttctggaactccgcatcttcatagtccaactgtt
tctcaggatacagacactgaaacaaatgtatttactggtgaaactgacacccttaggaca
ttatcatgcgtcctagatgatgttagttcatcacacgcttttgacaaccttaatgcactt
cctaatgaagtgttttatgtagactctgatgaaccaaaaagttccagtcagtttatgtgt
gaatctgagcagcctagcattcctcttaggcccactgcccctaaacctcagagccccagt
gctgagaaggtcaagtgcaatattaatttccattgcccagatcgtcacagcacgttgtca
ctgagctcaatggaaagtgaggaaagagttgagttacctgccccgaagttggggagaaat
cctgtttgcttccaggactcagtgcaaactgggtactatgatgatggaaatgaagacagt
ggcataagcagccactctcagctgagcctcaatttagcttctggtactgaagaaaagaag
gaagaggttgttgttgatgaccagtggaggatgtccccatcccaggatgaagaaaggaca
gatgcacaaaagttcactcccagaagatggggctctggaaaaagatctcggccaaggcca
ctctcagactatggtcagttggcaatcaggagtttctcaataccagaagattcagttgca
gtggagtctcagaaaacagactgtgtagatggtgaaagtcagcctggatttgcttctgtg
gagtctacagctcaaatcagtacagtaggtcaccaaagagggcgaaaacgaagacccatc
tctttaataggtgggatcagtttctatgggaacagccagacagaagaaatagaagatctg
ctgacacaaccaataacaaggccacctgttccagcccaccaagttcccccatataaagct
gtttcagccagattccggcccttcaccttttcacaaagcacccccattggcctggatcga
gtgggacggaggcggcaaatgagagcatctaatgttgttacagatggtggaactgaatct
tctgccttagttgatgacaatggtagtgaggaggattacagttatgaggagctctgccaa
cccagccctagatacctgcagcctggaggggaacagctagcaattaatgagctgataagt
gatggcagcatggtctatgcagaggcactgtgggaccatgtgactatggatgatcaagag
ctaggttttaaagctggggatgtcatccgagtccttgaagcttccaacaaagactggtgg
tggggaagaaatgaagacaaggaagcctggtttccagctagctttgtcaggctacgagtt
aatcaggaagaactaccagaaaattgtggtagcatccaagatgaagagcaacatgcagat
gctagtaaacatcgccaaaaaattgctgaaaacaaggatcagatgagaaccaatgttata
caggaaataatgaacacggagagagtctatatcaaacatctcaaggacatctgtgaggga
tatattcggcagtgtcgtaaacatacaggaatgttcaccacggctcagttaaacaccatt
tttggaaacattgaagatatttacaaattccaaagaaagtttctgaaagatcttgagaaa
cagtacaacaaagaggaacctcatttaagtgaaattggatcctgctttcttcaacatcaa
gaaggttttgccatctactcagaatattgtaacaatcatcccagtgcctgccttgagctt
tccaacctaatgaaacagggcaaataccgtcacttctttgaggcctgtcgcctgcttcag
cagatgattgacattgctattgatggctttctccttacacctgttcagaagatctgtaaa
taccctcttcagcttgcagagttactcaaatatacgaccgaagtgcacagtgattataac
aatatacaggcagcgtacgaggccatgaagaatgtagcatgcctcatcaatgagcgcaaa
cgaaggctggaaagcatagacaagattgcatgctggcaagtgtctattgttgattgggag
gggcaggatgttttagccagaagctcagaactgatccactcaggcgaattgaccaaaatc
tcaaagcaaggcaaaagccagcagaggattttttttctttttgaccatcagcttgtgttt
tgtaagaaggacctgctgcgaagggacatgttatattacaaaggtcggattgatctggat
gagatggaacttgtggatattgaggatggcaaagataaggactttaacattaatatcaag
aacgctttcaaaactgtgaatagagcaacagaagaggttcatttgttttgtgcaaaaaaa
caggaagataagaaaagatggttggaggcatgtgaaaatgaaaggcgaagagtgcaggaa
gacaaagaaatgggaatggaaatctcagaaaatcaaaaaaaacaagccatgcaaaatgcc
agaagatcaaggcatggaaaaattaaaggtataagttataatggatgtcccatgcctcct
ccacaccagagtttacatcctattcatcaacgccacatcactgtgcccaccagcattcca
cagcagcaggtctttgccctggcagaacccaaacgaaagccatcccttttctggcacact
ttcaacaaacttaccccattcaagaagtaa
DBGET
integrated database retrieval system
