Lepidochelys kempii (Atlantic ridley): 140910155
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Entry
140910155 CDS
T11378
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140910155 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140910155 (CNOT6L)
Enzymes [BR:
lkp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
140910155 (CNOT6L)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140910155 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140910155 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140910155
NCBI-ProteinID:
XP_073196554
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Position
4:complement(13717144..13786265)
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AA seq
550 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSQWAELEISGRVRCLSTSLWSLTHLTALHLND
NNLARIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPSRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPLHAVDKQLLIVANAHMHWDP
EYSDVKLIQTMMFVSELKNVLEKASIRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN
GIVADNHKDFKELRYNECLMNFSGSGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFK
GVIDYIFYSNTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPPLLPL
VNGVHLPNRR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttacaccatcatgtcagca
gaggaggtagctaatgggaagaagtctcaatgggcagaattagaaatctcgggtagagtg
cggtgcttaagtacgtcactttggtcactgactcacttgactgctctacacctcaatgac
aataatcttgctcgcattccacctgatattgccaagctccataatctggtttacctggat
ctatcatccaacaaactcagaagtttaccagcagaactaggaaacatggtatctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggacggctcttc
cagctacaaaccttaggtttgaaaggcaatcctttatcacaggatattctcagcctgtac
caggacccagatggaacacgaaagctactaaactacatgcttgacaatctagcagttcat
ccagagcagctgccttcaaggccgtggattactttaaaagaacgagaccaaattctgccc
tcagcttcattcacagtgatgtgttacaatgtgttatgtgataaatatgccacccggcag
ctatatggctactgcccgtcctgggcattaaattgggagtatagaaaaaagggaatcatg
gaagaaatcgtgaactgggatgcagatatcattagtcttcaggaagtggaaacagagcaa
tacttcaccctctttctgccagcattaaaagagcgtgggtatgatggatttttttctcca
aagtcacgtgccaaaatcatgtctgagcaggagagaaagcatgtggacggctgtgcaata
ttcttcaaaactgaaaaatttacattggtgcagaagcacacagtggagtttaaccaggtg
gcaatggcgaactctgaaggttcagaagctatgttaaacagagtgatgacaaaggacaac
attggagttgctgtggtgttagaggtgcacaaagaattatttggagcaggtatgaagccg
cttcatgctgtggacaaacagttgcttattgtggcaaatgcccacatgcattgggaccct
gaatactcagatgtaaaactcattcagactatgatgtttgtctcagaactgaaaaatgtc
cttgagaaagcctccataaggcctggcagtccaacagcagatcctaattctatccctctg
gtgctgtgtgcggatcttaactcactgcccgattcaggtgttgtggagtacttaagcaat
ggcatagtagctgacaaccataaggacttcaaagagctgcgttacaatgaatgtctcatg
aacttcagcggcagtggaaaaaatggggcttctgaaggaagaatcacgcatggcttccag
ctcaagagcgcctatgaaaacaacttgatgccttacaccaattacacctttgatttcaaa
ggtgtgattgactacattttctattccaacactcatatgaacgtgcttggtgtcctgggg
cctttagatcctcagtggctggttgagaacaacatcactgggtgtccacaccctcacatc
ccttcagaccacttctcactgttaacacagctcgaactccatcctccgctcctgcctctt
gtcaacggtgtacacttacctaacaggaggtag
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