Lepidochelys kempii (Atlantic ridley): 140910269
Help
Entry
140910269 CDS
T11378
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04010
MAPK signaling pathway
lkp04210
Apoptosis
lkp04218
Cellular senescence
lkp04519
Cadherin signaling
lkp04620
Toll-like receptor signaling pathway
lkp04621
NOD-like receptor signaling pathway
lkp04622
RIG-I-like receptor signaling pathway
lkp04623
Cytosolic DNA-sensing pathway
lkp04625
C-type lectin receptor signaling pathway
lkp04920
Adipocytokine signaling pathway
lkp05132
Salmonella infection
lkp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140910269 (NFKB1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
140910269 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
140910269 (NFKB1)
04218 Cellular senescence
140910269 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140910269 (NFKB1)
04621 NOD-like receptor signaling pathway
140910269 (NFKB1)
04622 RIG-I-like receptor signaling pathway
140910269 (NFKB1)
04623 Cytosolic DNA-sensing pathway
140910269 (NFKB1)
04625 C-type lectin receptor signaling pathway
140910269 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
140910269 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140910269 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
140910269 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140910269 (NFKB1)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
140910269 (NFKB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
140910269
NCBI-ProteinID:
XP_073196904
LinkDB
All DBs
Position
4:28278829..28373088
Genome browser
AA seq
987 aa
AA seq
DB search
MDAALKMAEEDAYIMGVSDHQMFAMDQFMGVNALFNNTGFITSDLPLRTADGPYLQIIEQ
PKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKIFNYVGPAKVIVQLVTNGKSVHLH
AHSLVGKYCEEGVCTVNAGPKDMVVGFPNLGILHVTKKKVFETLEARMTDACKKGYNPGL
LVHPELNYIQAEGGGERQLTEREREIIRQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTR
RLDPVISDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDE
NGGVWEGFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLY
YPEIKDKEEVQRKRQKLMPNFSDGYGGGSGAGDGGSGMYGGGGSGAGSGYGYPSYGYSAY
GGMPFHPGPTKSSAGMKHGIANDMAEQDGESCNKHDDKPDMKHNKKVEITERSESRVCSG
DNKEEDVTLSCTAEVAEADCRLQDGLFLEKAMQLAKHHANALFDYAVTGDVKMLLAVQRH
LTVVQDENGDNVLHLAIIHLHSELVRNLLEVVLDFNSDDIINMRNDLYQTPLHLAVITKQ
ADVVEDLLRAGADVSLLDRHGNSILHLAAKEGDDKILNILLKHERTSPMINHTNGEGLNV
IHMAVMANSMPCLRQMIAAGADVNAQEQKSGRTALHLAVEQENISLAGSLLLEGDADVDS
TTYDGTTPLHIAAGRGSTKLTALLKAAGADPHIENFEPLFDLEDMRDKDSEDEGIVPGTT
PLDMASSWEVFDILNGKPYESKLTSDDLLMQGDMKKLNEDSKQQLYKLLEVPDVNKNWCT
LAQKLGLGILSNAFRLSPTPAKTLLDNYEVSGGTVKELVDALRLMEYTEAIEIIQKVLSI
PLNQSSNEDHAVKAPPSPPSAFSNKEEMGELYNVKLQDNESMCDSGVETSFRRLSFTYSE
SLNSKSSITLSKMALGYGQEGSVQGKM
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgctcttaaaatggcagaagaagatgcatatatcatgggagtatctgatcat
caaatgtttgcaatggatcagttcatgggagtgaatgcattatttaataatacaggtttc
attacctcagatttaccactacgaacagcagatggaccatatcttcaaatcatagaacag
cctaaacagagagggtttcgtttcagatacgtgtgtgaagggccttcgcatggtggactt
ccaggtgcttctagtgaaaagaacaaaaaatcataccctcaggtcaaaatcttcaattat
gttgggcctgcaaaagtaattgtccagttagttactaatggaaaaagcgtacacctgcat
gcccacagcttggtgggtaaatattgtgaggaaggagtatgcacagttaatgcaggaccg
aaggatatggtagtagggtttccaaacctagggatacttcatgtcacaaagaagaaagtg
tttgaaactctggaagcacgaatgacagatgcctgtaaaaaaggatacaatcctgggctc
ctagtgcatcctgaactcaactatatacaagcagaaggtggtggagagagacaactaaca
gagcgggaaagagaaatcatccgtcaggcagcccttcagcagactaaagagatggacctc
agcgtggtgcgactcatgttcacagccttcctccccgacagcactggcagcttcacaaga
agacttgatcctgtcatatcagatgcaatatatgacagcaaagcccccaatgcatccaat
ttaaagattgtaagaatggacagaacagcagggtgtgtgacaggaggagaggagatttac
cttctttgtgacaaggttcagaaagatgatattcaaattcgtttttatgaagaggatgaa
aatggtggtgtatgggaaggctttggagatttttcccctacagatgtacataggcagttt
gctattgtattcaaaaccccaaagtacagagatgtcaatatcacaaaaccagcatctgtg
tttgtccaactacggcggaaatctgatctggaaacaagtgagccaaagccatttctgtac
taccctgaaatcaaagataaagaagaagttcagaggaagcgacagaagcttatgcctaat
ttttctgatggttatggtggaggcagtggtgctggagatggagggagtggaatgtatgga
ggcggaggaagcggtgctggctcagggtacggctacccttcctatgggtattctgcttat
ggaggcatgcctttccacccaggccccacgaagtctagtgctggaatgaaacatggaatt
gcaaatgacatggctgaacaggatggggaaagctgcaataagcacgatgacaaaccagat
atgaaacataacaagaaagtggaaatcacagagaggagtgagtccagagtttgtagcggt
gataataaggaggaggatgttactttgtcatgtacagctgaagtagctgaagcagattgt
aggttacaggatggtctgttcctggagaaggcaatgcagcttgctaaacatcatgccaat
gctctttttgactatgctgtaactggtgatgtgaagatgctactagctgttcagcgacat
cttactgtcgtccaggatgaaaatggtgacaatgtccttcacttagcaattatccacctt
cattctgagctggtgagaaacctcttagaagtggtgctggattttaattctgatgacatc
atcaatatgagaaatgacctttatcagacaccattgcacttggcagttatcacaaagcag
gcagatgtggtagaggacttgctgagggctggagctgatgtcagccttctggatcgacat
ggcaattctatcttgcatctagctgccaaagaaggagatgacaagattttaaatatactc
cttaagcatgagaggacatctccaatgatcaaccatacaaatggggaaggtctcaatgtg
attcacatggcagtgatggcaaatagcatgccttgtctcagacagatgattgctgctgga
gctgacgtcaatgctcaggaacaaaagtctgggcgaactgcgttgcatctggctgtcgaa
caagagaacatctctttggcaggctcccttctccttgagggtgatgcagatgttgacagt
actacatatgatggaacaactccacttcacatagcagctggaagggggtctacaaaactg
acagctcttctcaaagcagcaggtgcagatcctcacattgagaactttgagccattgttt
gacctagaagacatgcgagacaaagacagtgaagatgaaggaatcgtacctggaacgaca
cctttggatatggcctccagttgggaggtatttgacatattaaatggcaaaccctatgaa
tcaaagttgacttctgatgacttactgatgcaaggagatatgaaaaaattgaatgaagac
tccaagcagcagctttacaagttactagaagtaccagatgtaaacaaaaactggtgtaca
ctggcacaaaaattgggtctgggcatacttagtaatgccttcagattgagtcctacccca
gccaaaactctgctggataactatgaggtttctggtggtacagtgaaagagttggttgat
gccttgagactaatggagtacacagaagcaattgaaatcattcagaaagtgctctccatt
ccattaaaccagtctagcaatgaggatcatgctgtgaaggctccaccatcaccaccatct
gccttctccaacaaagaagagatgggtgaactttataatgtaaaattacaagacaatgaa
agcatgtgcgatagcggcgtggagacctccttccgcagacttagcttcacttattctgag
tcccttaacagcaagtcatcaataacacttagcaaaatggccctgggatatggacaagaa
ggctcagttcaaggcaaaatgtaa
DBGET
integrated database retrieval system
