Lepidochelys kempii (Atlantic ridley): 140910423
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Entry
140910423 CDS
T11378
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140910423 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkp03021
]
140910423 (SMARCA5)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140910423 (SMARCA5)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
140910423 (SMARCA5)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
140910423 (SMARCA5)
RSF complex
140910423 (SMARCA5)
WICH complex
140910423 (SMARCA5)
B-WICH complex
140910423 (SMARCA5)
NORC complex
140910423 (SMARCA5)
BRF complex
140910423 (SMARCA5)
NuRF complex (fruit fly)
140910423 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
140910423
NCBI-ProteinID:
XP_073197329
LinkDB
All DBs
Position
4:52965268..53009782
Genome browser
AA seq
1039 aa
AA seq
DB search
MSAGQQEPPPDETLPPASTAPPATTNNGSEAAGAPPPAAGDADREEAFDDASPGKQKEIQ
EPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQN
LLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISL
YENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPT
LRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK
NEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNC
LGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI
LNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK
LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPDSSKFV
FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE
ERIVERAEMKLRLDSIVIQQGKLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDDDI
DGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKLAFTEWIEPP
KRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRK
TIGYKVPRNPDLPNAAQAQKEEQLKIDEADPLNDEELEEKEKLLTQGFTNWNKRDFNQFI
KANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRR
ISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELR
QCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQ
KRKMDGTPDGRGRKKKLKL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagcaggagccgccgcccgatgagaccctgccccccgccagcaccgcg
cctcccgcaaccactaacaacggcagcgaggccgcgggggcaccaccccccgccgcgggc
gacgctgacagggaggaagcttttgatgatgcatcaccaggaaaacaaaaagaaatccag
gaaccagatcctacatatgaagagaaaatgcaaacagacagagcaaacagatttgagtat
ctgttaaagcagactgagctgtttgctcatttcattcagcctgctgctcaaaagactcca
acttcacctttgaaaatgaaaccaggacgtccacgaataaaaaaggatgagaaacagaat
ctgctgtcagttggcgactatcgacatcgtagaacagaacaggaagaagatgaggagcta
ttgacagaaagctccaaggcaactaatgtatgcactcgattcgaagattctccatcatat
gtaaaatggggtaaactgcgtgattatcaggtccgagggttgaactggctcatctctttg
tatgagaatggcatcaatggtatcctggcagatgaaatgggtcttggaaagacactgcaa
acgatttctcttcttgggtacatgaaacactacagaaatattcctggccctcacatggta
ttagttcccaaatccactttacacaactggatgaatgagttcaagagatgggtaccaaca
ctccgagcagtttgtttgataggtgacaaagaccaaagagctgcctttgtccgagatgta
ctgttgccaggagaatgggatgtctgtgtaacatcatatgaaatgctcattaaagagaaa
tctgtgttcaaaaaatttaactggagatatctagttatagatgaagcccacaggatcaaa
aatgaaaaatcaaagttgtcagaaattgtgagggaattcaagacgacaaatcggctgctg
ttaactggaactccacttcagaacaatttacatgaactctgggcacttctcaactttctt
ttgccagatgtctttaactcagctgatgacttcgattcatggtttgatacaaataactgt
cttggagatcaaaagctggtggaacgtctccacatggtgctaaggccattcctcctacgc
cgtattaaagctgatgtagaaaagagtttgcctccaaagaaggaagttaaaatttatgtg
ggtctaagcaaaatgcaaagagaatggtatacacgaatcttaatgaaggatatagatata
ttgaactctgctgggaagttggacaaaatgagactgttgaacatcctgatgcaattgcga
aaatgttgcaatcatccttacctctttgatggagcagaacctggtccaccttacacaaca
gatatgcatttggttaccaacagtggcaaaatggtggtattggacaaattgctaccaaag
ttgaaagaacaaggctcacgagtattaatctttagtcagatgacaagagtactagacatt
ttggaagattactgcatgtggcgaaattatgagtattgtagattggatggacagacacct
catgatgagagacaagattctattaatgcatataatgaacctgacagctccaagtttgtg
tttatgttgagcacgcgtgccggtggtcttggaatcaatctggctaccgctgatgtcgta
attctttatgattcagactggaatccacaagtagatcttcaagctatggaccgagcacac
agaattggccagacaaaaaccgttagagtgttcagatttatcacagacaacactgtggag
gaaagaatagtggaaagagcagaaatgaaacttcgtttggattccatagtcattcaacaa
ggcaaactggtggatcaaaatctgaataaaataggaaaagatgaaatgctgcagatgatt
cgacatggagctacgcatgtgtttgcctcaaaggagagtgagattactgatgatgatatt
gatggtattttggaaagaggtgcaaagaagactgcagaaatgaatgagaaactctcaaag
atgggcgaaagttcacttagaaattttacaatggatacggagtccagtgtatacaacttt
gagggggaagattatagagagaaacaaaagctggcattcacagagtggattgagccacct
aaacgagaaagaaaagccaactatgctgtcgatgcttacttcagggaagctcttcgtgtc
agtgaaccaaaagcaccgaaagctccacgacctccgaaacaacctaatgttcaagatttc
cagttctttcctccacgtttgtttgaactactagaaaaagagattctgtattacagaaaa
actattgggtacaaggtacctcgtaatccagacttgccaaatgcagcccaagcacaaaaa
gaagaacagcttaaaattgatgaagctgatccccttaatgatgaagagttagaagagaag
gagaaactactaacacagggatttaccaactggaataaaagagattttaaccagttcatc
aaagctaatgaaaaatggggccgtgatgatattgaaaatatagctcgtgaagttgaagga
aaaaccccagaggaagtcattgagtattcagctgtgttctgggaaagatgcaacgaactc
caggacatagagaagatcatggctcagattgaaagaggagaagctagaattcagaggcgg
attagtataaaaaaagcacttgacacaaagattggcagatataaagcacctttccaccag
ctgagaatatcatatggtactaacaaagggaagaattatacagaggaggaggatcgcttt
ctaatctgtatgcttcacaagctaggatttgataaagaaaatgtttatgatgaattaaga
cagtgtattcgaaactctccccagttcagatttgactggttcctgaagtccagaactgca
atggagctacagaggagatgcaataccttaatcactttgattgaaagagaaaacatggaa
ttggaagaaaaggagaaggcagagaagaagaaacgtggaccaaagccttcttcagcacag
aagcgtaaaatggatggtactcctgatggtcgaggcaggaaaaagaagttaaagctgtga
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integrated database retrieval system
