Lepidochelys kempii (Atlantic ridley): 140910707
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Entry
140910707 CDS
T11378
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140910707 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lkp03041
]
140910707 (DHX15)
03009 Ribosome biogenesis [BR:
lkp03009
]
140910707 (DHX15)
Enzymes [BR:
lkp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140910707 (DHX15)
Spliceosome [BR:
lkp03041
]
Complex A
U2 snRNP components
U2 related factors
140910707 (DHX15)
Complex B
140910707 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
140910707 (DHX15)
Ribosome biogenesis [BR:
lkp03009
]
Eukaryotic type
90S particles
Helicases
140910707 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
AAA_29
Cas3-like_C_2
Flavi_DEAD
AAA_25
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
140910707
NCBI-ProteinID:
XP_073198473
LinkDB
All DBs
Position
4:106088937..106158823
Genome browser
AA seq
766 aa
AA seq
DB search
MSKRHRLDLGDDYSSNKKRATADGKDRDRDRDREDRSKDRDRDRDRERDRDRERDKEKDL
RPSSNSMLLVGGGLPPLKPAILPQGINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDI
LIRNQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEM
DVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLAT
DILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPER
DYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLY
STLPPQQQQRIFEPPPPKKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNP
RIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGS
VVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDP
QLAKMVIASCDYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLN
VYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINI
RKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRT
CTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccatcgcctagacctgggggacgactacagctccaacaagaagcgcgcc
acggctgacgggaaggaccgggatcgtgaccgggatcgtgaagatcgttctaaagaccgt
gacagggatcgtgacagagagagagatcgtgacagagagagagacaaggaaaaagatttg
cgtccttcatctaattctatgttgcttgttggtggtggattaccacctttaaaaccagca
atacttccacagggtattaatccattcacaaacctaccacatacacctcgatactatgaa
atcctaaagaagcggcttcagctccctgtctgggagtataaggaaagatttacagatatc
ctgatcaggaaccaatcttttgtattggttggagagaccgggtctggtaaaacgacacag
atccctcagtggtgtgttgactacatgcggtctttacctggacctaagagaggtgtagct
tgtacccagcctaggagagtagctgcaatgagtgtggcacaacgagttgctgatgaaatg
gatgtgatgttgggccaggaagttggttactcgattcgatttgaagattgcagtagtgca
aaaacaattctgaagtatatgactgatggtatgttacttcgtgaagctatgaatgaccct
ttgctggagcgctatggtgttataattcttgacgaggcccatgaaagaacattggctact
gatattttgatgggagttctgaaagaggttgtaaggcaaagatctgacttgaaggttatc
gttatgagtgctactctagatgctggcaaattccagatttattttgataattgtcctctc
ctaactatccctggtcgtacccatcctgtggagattttctatactccagagccagagagg
gattaccttgaggcggctattcgaacagtaatccagattcacatgtgtgaagaagaggag
ggagatcttctactctttcttactggacaagaggagattgatgaagcctgtaagaggata
aagcgtgaaattgatgatttgggtcctgaagtgggtgacatcaaaatcattccattatat
tccacgcttcccccacagcaacaacagaggatttttgaacctcctcctcctaaaaaacca
agtggagcaataggaagaaaggttgtcgtatccactaatattgctgaaacatcattaaca
atagatggtgttgtgtttgtgattgatcctggatttgctaagcaaaaggtatacaatcct
cgtattagagttgaatctctgttggtgacagcgatcagcaaagcatctgctcagcagaga
gctggccgtgctggtcgtactaggccaggcaagtgcttcaggctttatacggagaaggcg
tacaaaactgaaatgcaggacaacacctatcctgaaattctgagatccaacttgggatct
gtggtgttacaactgaagaaacttggtatagatgacttggtgcactttgattttatggac
ccaccagctcctgaaactttgatgagagccctagagcttttgaattatctagctgcttta
aatgatgatggagacctgactgaattgggatccatgatggctgaatttccactggatcca
cagctggctaaaatggttattgcaagttgtgactacaactgttctaatgagatcctatct
attactgccatgttgtcagtcccacagtgttttgttcgccccacggaagccaagaaagca
gcagatgaagccaagatgaggtttgcccacatagatggagatcatttgaccttgctgaat
gtctaccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcatt
aactacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggat
agatttaatttgcctcgtagaagcacagactttacaagcagagactattatatcaatata
agaaaggctttggttactggatattttatgcaggtggcacatttggagcgaacagggcat
tacttaacagtgaaggacaaccaggtggtgcagttacatccttccacagttcttgatcac
aaacctgaatgggtgctttataatgaatttgtccttacaacaaagaattacatccgcaca
tgtacagatatcaagccagaatggttggtgaaaattgcccctcaatattatgacatgagc
aatttcccacagtgtgaagcaaagagacagttggaccgcatcattgccaaacttcagtcg
aaggaatactcacagtactga
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