Lepidochelys kempii (Atlantic ridley): 140910844
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Entry
140910844 CDS
T11378
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
140910844 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkp03021
]
140910844 (POLR1A)
Enzymes [BR:
lkp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
140910844 (POLR1A)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
140910844 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140910844
NCBI-ProteinID:
XP_073198951
LinkDB
All DBs
Position
4:complement(127157643..127213883)
Genome browser
AA seq
1708 aa
AA seq
DB search
MRPPREVPWRRLAGISFGMYTAEEIRKLSVKAISNPRYLDNVGNPSVNGLYDLSLGPPDA
KEVCTTCMQDFNNCPGHLGHIDLPLTVYNPLFFDKLYLLIRGSCLNCHLLTCTRAVVHLL
LSQLKVLERGLLDVVCDLEAILNRFLDENTDASGLDIEEELNRHVNEILQNHQLGDQCSH
VKNVCECRSKLIAQFWKLHMTSKRCPNCKSRRSQVRKEHNSKLTVTYPTVVQQKSGKEAI
LEEPAIIDETQLGKRGYLTPITAKDHIVALWKNEGFFLNHLFSGLEVGENSEFSPDMFFL
DLLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVQLIRKLLAFMAQEQSQPIQLVENE
IQKVTDEPLESLDRSVLAMISGQSTADKLYNIWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QILEKKEGLFRKHMMGKRVDYAARSVICPDMYIATNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPNVHPGASMVVNEDRSRTVLSATSQTQREAIAKQLLTPSTGVPKPGMKIVC
RHVKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYMLACTDEQYLVPKDGKPLAGLIQDHMISGASMTIRGCFFTREQYMELIYR
GLTDKKGRVKILAPAIMKPQRLWTGKQVVSTLLINVIPENQIPLNLSGKAKIGGKAWVKG
PQNRIPGSNLDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCHEVYGGETGGKVLT
CLARLFTAYLQLYRGFTMGVEDILVKPQADHRRHRIIEVSTHCGTRAVRAAFNLPETASC
EEVQGKWQDAHLHKDQRDFNMVDLKFKEEVNNYSNEVNKACMPLGLYRSFPENNLQLMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPRSGGFVTGRFLTGI
KPAEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLSVRDSDGSVVQFLY
GEDGLDIPRTQFLQPRQFPFIADNYEVIQKSKHIDEVLSKLDPRQANQHFRAIKKWQTKH
QASLPREGAFLLYSQKKMARVREQTLGGEIINGRDPATQQLLKMWYELDEKSRRKYLKRT
SKCPDPSLAVWRPDIYFASVSEAFESEVENYINEWNAQNNSNYVKSELSCDRLNSLLHLK
WQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANI
KTPMMSVPVFSTKKAHKKVKRLKKQFTRVCLAEVLQKVEVEESLCIEGKLSKHRLYQIKF
YFLPYEYYREEKCLKPRDILYFMETRFFKILLETIKRKSAKLASFNVVNTRKATQRDLDG
SGGESQENQAQDDHEADEEEAGRLIDGEADEGDADATDTKRREKQEEEVDYESEEENSEE
NGDENPEEDEGMLNDDKRAEDAEEGVQNESNFQTKKEKGAKLEHSTQLRVSAVLSSHPSI
VNYAYDTESELWCEVSLKLPLMKAYFDLSSILTSLMQNTIVHETRGITRCFLNESTNKKG
EKEFVLNTEGINLPELFRYADLLDLSRLYSNDIHAMAKTYGIEAALRVIEREIKDVFAVY
GIVVDPRHLSLVADYMCFEGVYKPLNRFGMQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVRGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcccagagaggtgccgtggcggcggctggccggtatttccttcgggatgtac
acggccgaggagatcaggaaactaagtgtaaaagctataagcaaccctcgttacctagat
aacgtgggcaacccatcagtaaatggactgtatgacttgtctttgggacctcctgatgcc
aaagaagtgtgtaccacttgcatgcaggacttcaacaactgtcccggacacctaggccac
atagatctgccactgactgtctacaatcctctattttttgataaattataccttctgatc
cgaggttcttgtttaaactgtcacttgctgacctgtactcgagctgtggttcacctattg
cttagccagctgaaagtcttggagaggggattgcttgatgtggtctgtgatcttgaggcc
atcctgaataggtttttggatgaaaacacagatgcatctggtttagacatcgaagaagag
ttaaatcgtcatgtgaatgaaatactacaaaatcatcaactaggagatcagtgctcacat
gtaaaaaacgtgtgtgagtgtaggagtaaactgattgcacagttttggaaactgcatatg
acttcaaagagatgcccaaactgcaaatctagaagatcacaggtacggaaagagcacaat
agcaagctgacagtaacctaccccactgtggtacagcagaagtctggcaaagaggccatc
ttggaggagccagcaattatagatgagactcagttggggaaaagaggttacttgacaccc
atcactgccaaagaccacattgtggctctgtggaaaaatgaaggtttctttctaaatcac
cttttctctggtctggaggtgggtgagaattcagaattcagccctgatatgttctttcta
gatctccttgtggttccaccttcaaggtatcgtcctgtgaatcgtcttggagaccagatg
tttacaaatggtcaaactgtgaacttgcaggctgtcatgaaagatgtccaattaataagg
aagcttctggctttcatggctcaagaacaaagtcaaccaatacagcttgtagagaatgaa
atccagaaggtgacagatgagccattagaatcactggatcgttcagtcctggctatgatc
tcagggcagagcactgcagataaactgtacaacatttggattcgtcttcagagccatgtc
aatattgtgttcgacagtgacatggacaaactaatgacagaaaaatatcctggtatccgt
cagatactggagaaaaaggaaggactgttccgcaagcacatgatgggaaaacgtgtggat
tacgctgctcggtcagtcatctgccctgacatgtacattgctaccaatgagattggtatt
cctatggtatttgctaccaaattgacttaccctcagccagtaactccgtggaatgtcaaa
gaactgaggcaggctgtcataaatggtccaaatgttcaccctggtgcctccatggtcgtt
aatgaagacaggtcacgtacggtgttgagtgcaaccagccagacccagagggaagccata
gctaagcagctcctcactccttccactggagtcccaaaaccaggaatgaaaattgtatgc
cgccatgttaaaaatggagatgtcctcttactgaaccgtcagcccacccttcacagaccc
tccatccaagcccaccgggccagaatcctgccaggagaaaaggtgctgaggcttcactat
gccaactgcaaagcctacaatgctgattttgatggtgatgaaatgaacgcacattttcct
cagagcgagctgggccgggcagaagcctacatgttagcctgcaccgatgaacagtatctt
gttcctaaggatggcaagccactggcaggtttgatccaggatcatatgatctctggtgcc
agcatgacgatccggggctgctttttcacaagagaacagtacatggagctgatctatcga
ggactgacagacaaaaagggaagagtgaaaatccttgcacctgccattatgaaaccacag
cggttatggacaggaaaacaggtggtttctacgttgctaataaacgtaatccctgaaaat
caaatcccactgaatttgtctgggaaagctaagattggtggaaaagcctgggtgaaaggg
ccccaaaacagaattcctggatctaaccttgattcaatgtgtgaatcccaggttatcatt
agagagggggagttactttgcggggtcttggacaaagctcactatggcagctctgcctat
ggcctagttcactgttgccacgaagtctatggtggtgaaaccggcggcaaggtgcttaca
tgtctagctcgcctctttactgcctatttgcagctgtacaggggatttacaatgggagtt
gaagatattttggtcaaaccgcaagcagaccacagaagacaccgaatcattgaagtgtcc
acccattgtggtaccagggctgttagagctgcatttaacttgccagaaactgcatcgtgt
gaagaggtccaagggaaatggcaggatgcccatctccacaaagaccagagggattttaat
atggttgatctgaaattcaaggaggaagtaaacaattacagcaatgaggttaacaaggca
tgcatgccccttgggctctacaggagcttcccagagaacaacttgcagttaatggtgcag
tcaggagccaaaggatccactgtaaatacaatgcagatttcgtgcttgctgggtcagatt
gagttggaaggtagaaggccccctctgatggcatctggtaaatcgttgccttgtttccag
ccttatgatttttcccctagatcagggggatttgtgactggcagatttctcacaggcatc
aaacctgctgaattcttctttcactgcatggctggcagggaaggtctggtggatacagct
gtcaaaaccagccgatctggataccttcaaaggtgtatcataaagcacttggaagggctg
gtagttcagtatgacctgagtgtgagggacagcgatggcagcgtcgtgcagttcctgtat
ggtgaagacggactagatatccccaggacccagttcctgcaacccaggcagtttcctttc
attgcagataactatgaggtgatacagaagtctaaacacatagatgaagttttatccaag
ttagatcctcggcaagcaaatcaacacttcagagctatcaaaaagtggcaaaccaagcat
caagcttctttgccaagagaaggcgcttttctgctgtattctcagaaaaaaatggcgaga
gtgagggaacagaccctaggaggagagatcataaatggcagagaccctgcaacccaacag
ttactgaagatgtggtatgaactggatgagaagagccggagaaaatatctaaagaggacc
tctaagtgtccagaccccagcctggccgtctggcgtccagatatttattttgcatctgtt
tcagaagcatttgaaagtgaagtagagaattacatcaatgaatggaatgctcagaacaat
agcaactatgtaaaatcagagctttcttgtgatagattaaacagcttgttgcatttgaag
tggcaaaggtccctgtgtgacccaggagaggctgtgggtctccttgcggctcaaagcatt
ggggagccttccacgcagatgactctgaacacctttcattttgctggcagaggtgaaatg
aatgtcacattgggtattccaaggttgcgggagatcctcatggtagctagtgctaacatt
aaaactccaatgatgagcgttcctgtgtttagtaccaagaaagctcacaagaaggtgaaa
aggcttaagaaacagtttacaagagtgtgcttagccgaggtcttgcaaaaagttgaagtt
gaggagtctctgtgcatagaagggaagctaagcaaacaccgtctctaccaaatcaaattt
tatttcctgccatatgaatactatcgggaggagaagtgtctgaagccgagggacatctta
tacttcatggaaacacgattctttaaaatcttgctggaaacaattaaaaggaagagtgca
aagctggcgtctttcaacgtggtcaatactcgtaaagcaactcagagggatctagatggc
agtggtggagaatcccaagaaaaccaggcacaggatgatcatgaagctgatgaggaggaa
gcagggaggctcattgatggtgaagcagatgaaggggatgctgatgctacagatacaaaa
cgaagagagaagcaggaagaagaggttgattatgagagcgaggaagagaacagtgaggaa
aatggtgatgaaaatccagaagaggacgaaggcatgttgaatgatgataaaagggctgag
gatgctgaagaaggggttcagaatgaatctaattttcagactaaaaaagaaaaaggagcc
aaactagagcattcaacacagctaagagttagtgctgtgctgagcagtcatccatctata
gtcaactatgcatacgatacagaaagtgagctctggtgtgaggtttcactgaagcttcct
ctgatgaaggcatactttgacctctcctccatcctaacgtccctcatgcagaacacaatt
gtccatgagacaagagggatcacgcggtgcttcttaaatgaaagcaccaataagaaagga
gagaaagaatttgttttaaacaccgagggaataaacctcccagagctgttcagatatgct
gatcttttggacctaagtcggctttattccaatgacattcatgcaatggctaagacctat
ggaatcgaggctgccctgagggtgattgaaagggaaattaaagatgtgtttgctgtgtac
ggtattgtggtagatcctcggcacctttctcttgtggcagattacatgtgttttgaaggt
gtttacaaaccgctgaatcgttttggaatgcagtccaactcctcccctctgcaacagatg
acgtttgaaaccagctacaaatttttgaaggaagcaacaatgatgggtgcccatgatgag
ctgagatctccttctgcatgcctggtggtgggaaaagttgtccgaggagggactggtttg
tttgacctcaagcaaccccttacgtag
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integrated database retrieval system
