Lepidochelys kempii (Atlantic ridley): 140911390
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Entry
140911390 CDS
T11378
Symbol
BDP1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkp03021
]
140911390 (BDP1)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
140911390 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140911390
NCBI-ProteinID:
XP_073200416
LinkDB
All DBs
Position
5:complement(51099912..51171412)
Genome browser
AA seq
2401 aa
AA seq
DB search
MFRRARLSVKPNVRFGGRGGGCAPEPQGGQDSASPPAGKEPQPSATASPGAAAGPCPDPP
PQPAGEQPGSRDERTGAANDDGEARKPADTPLQRRKRISTMPNLAKPRVTLPSAQHSVSK
SSQKQVPQSVTNGNSSLQKESYPSEKSNTESSPKSPILPEKKTPVPQVPQFSPLKKSVSK
EPNVGVTALKNDEILQKNTPCPLKERPTQGRPTQEEMPHTKPPLTKDKQKCSDRERILKA
QKLREMLKEELKKEKMKRWKNRPTVIEGKTPPDHSKMTMRDLIYYLPENNPMKSSLAEEK
KTEKTSTQVQMKESEEIHVPDHEDEEAETEPEEGEENDGPLLVPRVKVAEDGTIILDEES
LTVEVLRTKGSCVVEENDPIFERGSTTTYSSFRKSFYTKPWSNKETDMFFLAISMVGTDF
SLIGQLFPHRARTEIKNKFKREEKANGWRIDKAFKEKRPFDFEFFAQLLEEVLADEKKRK
QKATKRPSSKEKKAPKSRKKQKAKVVSEEAGNDQDDPQGVRISDAETEVDAGTAEKENEA
SLNVSEQTEEIILEPVTTKKKRKKKKKDDSELEVENLSEEGAAPSKPAKGGKSSNKKKNA
VSGTNSDNHTESGEELDVLNQENAAETPVLMEQESHSCLQLNDKTEESDLNLASFQDTSA
GLIETESSEPETSDIISGSQDWQPSESQASGTRNKKGNGEETSEAKNNEVCDLYKPAEKE
STAGKSHDSKSETMETEKAAAGKPSVRGRLQRPKPNLARASGKTEAAVQEKSEVMISPPE
PTEGAEKMYTMEAGEGNTAEITRDETTGREIKALETKSQETEKAAMRGRRQRFKPNVVGA
SGKREAPLQGEGKEKTPQEPEGAIEKQSTDPGNTPDGTRGETTKKDGRVSETEPQSKEIS
CLQEGGKQSVLKPAPLMRGRMQRPKPNVGRAAGRQEVSTIKKDVQDEKTEVGEAVKSLIH
CENKSGALLTTGDATGNEDILLCSEISEKEATAGPETVVSMHVKQHSQEKPLGSDSCEQE
KELCVDDLEEVSDFGTGDASSQQEEKVAVQTTHLLRNQFQRPKSNVGKEAGGGEVPGVDK
DVSEDNSEKDNSLIQCDSKCSMLPDLDKAAKCEVMPSLQSLEKDDPADSQEIFATPISLQ
SPKKLSGSESGEQNVSPPPADNQEKTSAVAARLHSNHISQGESKPASLQPAQIVRSRFQR
PKPNIGRAVGRKETRASEKDETEKKTEAEQSALQKDESAGIPSIIHKSKGENEAVSSEAS
GDKLLGCEKQTPEGESPVPDIYQNVSDEQSSSQEDKPCAIKPAQLMRSRFQRARPNLGRA
YGKKEEPVAEKVTAPVEGETGKAEESPLPHRVSDVHLSPKAEVEAQKDGSDSCGVTSPKR
SIQSEKLCSLEKSLSCNNQQDQRKSCMSTDVESRLPNSSERSSSGEESKQSAIKPAQLVR
SHLRRPKPNLVRATRKKEALEEGENTTEEKTEGRNTEEGLISCDIKSENLTSLLHTSRNL
VEVASSSEDSQKKESANSIEAVPPKRSRQSCKFQSPERLSESESQIEQEEDSQPLYAQEK
TSNKLIRRQSRRSSEQGGLPKRVSELRTSASECEVDRFEKGKPRQKTKPNITKGKGLKTA
HSKRSGKEHGSSKVTLVTLRASQEEDEDDADEFELDDEDECFSPEEVNKAPVFVPVGLRS
PKPVPVQIEETMEELEISVNVPDVPCITTAEYLSHDLNVVVQPVMQRDENLNASQIEVTT
HENPETDTGISDGSTEAAMTLLAMGDPMFQLKISTQGRTQVFPDQDELHMADGLINQPNT
EQNVAPSNQSLSSPTNNELVPSEDGNKVILPDHSSGKEASVHIFFKEDAAPTSDHPVPKA
NSTSRFARCRLPKPKPNLSRVLGTNRNVHQKSLRPNTDVEQFKQVQSEGKALRETIEEQE
VELEWKIRPAENSSAGLQNFGSGSTDLAETENKTRESWEASVELKSPIIAPKAEIFLPGL
ENDPNQSSTGVLPEDKPGTVMHSLPEVQLTQTEAVTQEFQQQYITSTKETSVNGNGNEYP
EEVAEQTFILTLVEIPADSREYHDPSMSLDQALEPLLPAPILLTPVNTGLANVMGEQSIG
SLTTPVDKAATSLDTCTGTEGLQRASIESFTNLDQTSCKRCAIDLEKSDTPPAKRTPSTS
ADDNLANTYKESSVKSTHAPRKMAGRISEKLKTSKKKKLPTSIFVSKTAESGQSESFQNL
GTVPVEESACKCSDELVSGMDREGKEAANEQESSMDICESGHSGHVGSTAALSKSPMLRA
GRRPLGFLSLICKSSISEPGEGAKGNGQRLQKPLIASSKQSLKRPTPSAENNTDTQESCS
LPSTSLLTSAECENRGTAAVQISSESSEKQASSTKQEKEEEPTRISEYFFNDIFMEVNDS
E
NT seq
7206 nt
NT seq
+upstream
nt +downstream
nt
atgttccgccgagccaggctcagcgtgaagcccaacgtgaggttcgggggtaggggcggc
ggctgcgccccggagccgcagggcggccaggattccgcctccccgccggcagggaaagag
ccgcagcccagcgcgacagcctctcccggagccgctgccggtccctgcccggaccccccg
ccccagccggcgggggaacagccggggagcagagatgaaaggactggtgctgccaatgat
gatggagaagctaggaaacctgcagatacacctttacagagaagaaaacgaatatccact
atgcctaatctggcaaaacccagagttacacttccatctgcacaacattcagtatcaaag
tcttctcaaaaacaagtacctcagtctgttactaatggtaactcttcacttcagaaggaa
tcctatccatcagagaagagcaatacagaaagctctccaaagtctcccatactgcctgaa
aagaaaacacctgtcccacaagtgccacagttttctccacttaaaaaatcagtgagcaaa
gagccaaatgtgggtgtaactgctctcaaaaatgacgaaatcctccagaagaacacaccc
tgtcctctcaaggagagacctacccaaggaagacctacacaagaggaaatgccacataca
aaaccccctctaacaaaagataaacaaaaatgctcagaccgtgaaagaatcctcaaagct
cagaagttaagagagatgctcaaagaagagctgaagaaagagaaaatgaaaagatggaaa
aatagacctacggtaattgaagggaaaactccaccagatcattccaaaatgactatgaga
gacttgatatactacctgccagaaaacaatcctatgaagtcttctctggcagaagaaaag
aaaactgagaagacttctacacaggtccaaatgaaagaatcagaagagatacatgttcct
gaccatgaagatgaggaggctgagactgagccagaggaaggggaggagaatgatggtcct
cttctagttcctcgagtgaaagtagcagaagatggtacaattattctggatgaagaaagt
ttaactgtagaagttttaaggacaaaagggtcatgtgtcgtagaagaaaatgatcctatc
tttgagcgtggctccacaactacctattccagctttagaaaaagtttctataccaagccg
tggtcaaataaagaaactgacatgttcttcttagctatcagcatggtaggaacagacttc
tctctgattggtcagctgtttcctcacagagcaagaacagagattaagaacaagtttaaa
cgtgaggaaaaagcaaatggatggaggatagataaagcattcaaggaaaagcgaccattt
gactttgaattctttgcccagttgcttgaggaggtactggcagatgagaaaaaaaggaag
caaaaagctactaaaagaccaagttcaaaagagaagaaggcacccaaatctcggaaaaag
caaaaagctaaagttgtcagtgaagaagcaggtaatgaccaggatgatcctcagggtgtc
agaatttctgatgcagaaacagaagtggatgctgggacagctgagaaggagaatgaagca
tctctgaatgtctctgaacagacagaagagattatattggagccagtgacaaccaaaaag
aagaggaaaaagaagaaaaaagatgattctgaactggaagtggagaatctgtctgaagag
ggagctgccccctcaaaaccagctaagggagggaaatccagcaataaaaaaaaaaatgca
gtgtctggtacaaacagtgacaatcatactgaaagtggggaggaactggatgttcttaat
caagaaaatgcggctgagactcctgtcctgatggagcaagaatcacattcctgtttacaa
ctgaatgataaaaccgaagaaagtgatctcaatttagccagctttcaagatactagtgct
ggattaatagaaactgaatcttctgaaccagaaacctcagatatcatctctgggtcacag
gattggcaaccttcagaatctcaagcttcaggtaccagaaataaaaaaggaaatggtgaa
gaaaccagtgaagcaaagaacaatgaagtatgtgatttatataaaccagctgaaaaggag
agtacagcaggaaaaagccatgattctaaatctgaaacaatggaaactgaaaaagctgct
gctggaaagccatcagtgagaggacgcctgcagagacctaaacccaatttagcaagggca
tctggaaagacagaagcagcagtccaagaaaaatctgaggtcatgatttctcctccagag
cctacagaaggggctgaaaaaatgtataccatggaagctggtgaaggtaacacagctgaa
atcaccagagatgaaaccacaggaagagagatcaaagccttagagactaaatcccaggaa
actgaaaaagcagcaatgagaggccgtcggcagcgatttaaacctaatgtggtaggagca
tctgggaagagagaagcacctctacaaggtgaaggaaaggagaaaactcctcaagagccc
gagggagcaattgaaaagcagagtactgacccaggtaacacacctgacggtaccagaggg
gaaactacaaaaaaagatgggagggtctcagagactgaacctcagtccaaagaaatatcc
tgtttacaagaaggtggcaaacagagtgtacttaaaccagcaccattaatgaggggtcga
atgcagaggccaaaaccaaatgtaggaagggcagctggaaggcaagaagtatcaacaata
aaaaaagatgtacaagatgaaaaaacagaagttggagaagcagtgaagagtttgatacat
tgtgaaaacaaaagtggtgcactcctcaccacaggtgatgcaacaggtaatgaagacatc
ctgctgtgctctgagatatcagaaaaagaagccactgcaggacctgagacggtggtctca
atgcatgtaaaacagcattcccaagagaaacccttgggatctgatagctgtgaacaagaa
aaggagttatgtgtggatgatttggaagaggtttcagattttggtacaggagatgccagt
tctcaacaagaagaaaaagtggctgttcagacaacacatctattgaggaatcaatttcag
aggccaaaatcaaatgtaggaaaggaagctggaggaggggaagtgccaggagtggataaa
gatgtgtcagaggacaacagtgaaaaagacaatagtttgatacagtgtgacagtaaatgc
agcatgcttcctgacctagataaagcagcaaaatgtgaagtcatgccatccttgcagtca
ttagaaaaagacgaccctgcagactctcaggaaatatttgcaaccccaataagccttcag
tcccctaaaaagctttcaggatctgagagtggtgaacaaaatgtgtctcctccacccgca
gataaccaggagaagacttcagctgttgctgccaggctccacagcaaccacatctctcaa
ggagaaagtaaaccagcctctctccagccagcccagatagtgaggagccgattccagaga
cccaagccaaacataggacgggcagttggaaggaaagaaacacgagcatcagaaaaggat
gaaactgaaaaaaagactgaagctgagcaatcagctctgcaaaaagatgaatctgctggc
atcccctccattatacacaagtcaaagggtgaaaatgaagctgtatcttctgaagcttca
ggagataagttgttgggttgtgagaaacagacaccagaaggagaatctccagtgcctgat
atttaccaaaatgtgtcagatgaacaaagcagttcccaagaagataagccatgtgctatc
aaaccagcacagctaatgaggagtcggttccagagggctagaccaaacctgggaagggca
tatggcaagaaagaagagccagtggcagaaaaagttactgctccagttgaaggggaaaca
ggaaaagcagaggagagccctttaccacacagggtttctgatgtacacctctctccaaaa
gctgaagtggaggcccaaaaagatggttcagattcctgtggggtcacctcaccaaaaaga
agcattcaatcagaaaaactttgctcccttgagaaatctttgagctgcaacaatcagcaa
gatcaaagaaagagttgtatgtctacagatgttgagagcaggcttccgaattcttctgaa
aggtccagttctggagaagaaagtaaacaaagtgctataaaacctgcacagctagtgagg
agtcatttacggaggccaaagccaaacctagttagagcaacaagaaagaaagaagccctt
gaagagggagaaaacacaactgaggaaaagactgaaggtagaaatacagaagaaggtctg
atatcctgtgatataaaatcagaaaacctaacctcgttactgcacacatctcgtaactta
gtggaagttgcatcctcctcagaggattcacagaaaaaagagtctgcaaacagtattgag
gcagtgcctcctaaaaggagcaggcagtcctgtaaattccagtctccagagagattgtcg
gagagtgaaagtcaaatagaacaagaggaagattctcagcctctttatgctcaggagaag
acctcaaacaaactgataagaaggcagtctagaaggtcatccgaacagggaggcctgcca
aaacgtgtatctgagctaagaacttctgcctctgaatgtgaagttgatcgctttgaaaag
ggaaaaccacgtcaaaagactaaaccaaatatcaccaaaggcaaaggcttgaaaactgcc
cacagcaagagatctgggaaagaacatgggagttcaaaggtaaccttggtgaccctccgg
gcttctcaggaggaggatgaagatgatgcagatgaatttgagctggatgatgaagatgaa
tgtttttcaccagaagaagtaaacaaggctccagtgtttgttcctgtaggtcttcgatct
ccaaaacctgttcctgtccagattgaggaaaccatggaagagcttgaaatatctgtgaat
gtcccagatgtgccctgcattactactgctgaatatctgtctcatgatttaaatgtggtt
gtccagcctgtgatgcagagagatgaaaatctgaatgcctcacaaatcgaagtgactaca
catgaaaatccagagaccgacacagggattagtgatggaagtactgaagctgccatgaca
ttacttgcaatgggagatccaatgtttcagttaaaaataagcactcaaggaaggacacag
gtgtttcctgatcaagatgaattgcacatggctgatggcctcataaaccagcctaataca
gagcaaaatgtggccccaagtaatcagtcactttcttcacctactaataatgaactggtt
ccctcagaggatggaaacaaagtcattctaccggaccacagttctggaaaagaagcaagt
gtacacattttttttaaggaagatgctgcacccaccagtgatcaccctgtgcccaaagcg
aatagtacatcaaggtttgcaagatgcagacttcctaagcctaaaccaaatcttagcaga
gtactgggaacaaataggaatgttcatcagaaatctcttcggccaaatacagatgtggag
caattcaagcaagttcaaagtgaggggaaagctctaagagagaccatagaagagcaggaa
gtggaactagaatggaagatcagaccagctgagaacagttctgcaggtctgcagaatttt
ggatctggaagcacagaccttgccgaaacagaaaacaagacaagagagagttgggaagct
tcagtggagttaaaatctcctataatagctccaaaagcagagattttcctacctgggcta
gagaatgatcctaatcaaagttctactggtgtccttccggaagataagcctggtactgtt
atgcacagcttgcctgaagttcagttgacgcagactgaagcagttacacaggagtttcaa
cagcaatacataaccagcacaaaagaaacttcagtgaatggaaatggtaatgaatatcca
gaggaggtggcggaacagacatttattttaacattggtggaaattccagctgactcgaga
gagtatcatgacccatctatgtcactagatcaagctttggaaccattgctgccagccccc
atacttctcactccagtgaatacaggcttagctaatgtgatgggagagcagagcattgga
tcactgacgactccagttgataaagctgctacctctttagatacctgtacaggaacagaa
ggactgcagagagcatcaatagagtcatttactaatttggatcagacatcttgcaaaagg
tgtgctattgatcttgaaaaaagtgacactcctcctgccaagcgaactccatctacctca
gcagatgataatcttgcaaatacttacaaggagtcttcagttaaatcaacacatgctcca
aggaaaatggctgggagaatttctgagaaattgaaaacttcaaagaagaaaaaactacct
acctctatatttgtatctaaaactgcagaaagtgggcaatctgaatcctttcagaattta
ggaactgtaccagttgaggaatcggcatgcaagtgttcagatgagctggtgtctggaatg
gaccgtgagggaaaagaagcagcaaatgagcaagaaagttctatggatatttgtgaatct
ggacattcgggacatgttggaagcacagctgccctttcaaagagcccgatgctaagggct
ggccgaagacctctgggatttttatctttaatttgtaaatcaagtatctctgaacctgga
gagggtgctaaagggaatggacagagactccaaaaacctctcatagcttcctcaaagcaa
agtctgaaaagacctactccatccgctgagaacaatacagacactcaagagtcctgttcc
cttccctctacaagcctgttgacgtccgctgaatgtgagaatagaggcactgctgcagtt
cagatttcttctgagtcttctgagaagcaagcttccagtactaaacaggagaaagaagag
gagccaaccagaatctcggaatattttttcaatgatatctttatggaggtgaatgattca
gaataa
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