Lepidochelys kempii (Atlantic ridley): 140911450
Help
Entry
140911450 CDS
T11378
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140911450 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140911450 (SKIC3)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
140911450 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140911450
NCBI-ProteinID:
XP_073200628
LinkDB
All DBs
Position
5:complement(61620007..61706089)
Genome browser
AA seq
1566 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAQ
SAYKKAAELEPSQLLAWQGLANLYEKSNQTDVKENLFNVYQKLLELYESTDKQKWCEVCR
KLVELYHQEKKYLEVARTWHKLIKIKQEEGADNAELHQLWKRLIQLLPDSTQNQDNETQQ
LLFTAFEHAVNSVDTVPSEDHQKLYKNFIQCLSKFPHETARLKKACDDMMVLYPTMSYPL
EVLCLHFIQSGSFTEEAQHCCCRLMEMDSSSSPGLIGLGIKFLQEKKYEEAVKSLTEGLQ
QTSQCQAAWYYLAEAQMKMHKHKEAVISCNRALKISGQLDDDDSGNLQQKYLALRLKAEA
LIKIAGADTAEEAISTLAQVSDINNDPVLLALKGQAYLNKGLIDQASKVAQQLVLSHPHL
AEAHALEGLIHYTQKNYQQAERSFQRAIERKAETAEYHYHLGLTYWFMGEEIRKDKTKAL
TQFLKAAKLDSYMGSVFCYLGHYYRDVAGDKSRARGCYKKAFELDRTDGEAGAAAVDLSV
ELGDTEAALAILTAVTERASAGTAKWAWLRRGLYYLRAGQHSQAVADLQAALRADPKDSN
CWESLGEAYLSRGGYTTALKSFTKASELNPKSIYSIYKAASIEQILGRYKDAIAEYQQIL
KKSKEYVPALKGLGECYLMMARAALADYLDGKVLDYVEQALEYFTRATKHRPDVSCLWKL
LGDACTIVHVISSSKVNVKVLGSLIGQNVGKQMLKKSELLSLGGRCYGRALKLMSSPNTW
CDLGINYYRQAQHLTAADSDTNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVACCSG
VGNYALAQHSFIKSVQAEQINVVAWTNLGVLYLATENIQQAHEAFKVAQSLEPSYLICWI
GQALIAEAVGSYETMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKTNRETELYRYNIVQM
NAIPAAHVVLSKYTERIQNDASAFTMLGYLNEYLQLKNQATDAYQRAVSLLKNSEDKEKY
NIAMQNYGRSLCAIGQYDKAIQAYMSTPLTELENIVGVALAYFKKGLLQDSIKAYERALS
LAESEQDKAHILTALAIMEYKQNKVDAAKTLLFKCSILKELTTESLQALCTLGLAKQDAT
LATAALKELLKHTKSKDNVYERCLITSAVYALQGRNVGVQRQASRAVHSNPDDPALWSLL
SRLVPLYTPHNAKGGAVAGNVAHMLDLNHGKKALLHTAVNQLAVGCHSAEDEKNNALKDI
QKAVHLFPDDPATWAVLMGACHAENTVVYLNNTQPKRRDLEMTLVATVSAKTKEKDLSAE
YIQALEDWSLCQAITGLKETGRITEAEALCTRSLKSCPDHPDLFLLLRQVQCKQLFQSHK
ELPDTVLEELHKTVMSNSTSVTAWHWLAKVYQSQRMMVAAEMCYRKSLQLASQQGSWNGK
LSSLLRLAMLALEICVANISNDHWPSLVQEATTEALKLSFCPLAVLLQALLQYNRKMGAR
ETRRMLERVVYQPGYPETIVSVARWYLLRHLYAKDDYELIDALVANAKANGDIRSLELDK
KLSASA
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcactgaaaagtgccagagatgcaataagaaataaa
gaatacaaagaagccttaaaacattgcaaggcagtgctgaaacaagagaaaaataactac
aatgcctgggtgtttattggcctggcagctgcagagttagagcagcctgatcaggcccaa
agtgcatacaaaaaggctgctgaacttgaacccagccagctactggcatggcagggatta
gcaaatttgtatgagaaatctaaccaaacagatgtcaaagaaaacttgttcaatgtttac
caaaagctcttggaactctatgaaagtactgacaagcagaagtggtgtgaagtgtgtagg
aaacttgtggaattgtatcaccaagaaaaaaaatacctagaggtggctcgcacatggcac
aaactgataaagataaaacaggaggaaggtgcagataatgctgagctccaccagctatgg
aagaggctgatccaattactgccagacagtacacagaatcaagataatgagacacagcag
ttgctttttactgcatttgaacatgcagtgaactctgtagacacggttcccagtgaagac
caccaaaagctttataaaaacttcattcagtgtttgtcaaaatttcctcatgagactgcc
aggctgaagaaggcctgtgatgatatgatggttttgtatcccaccatgagttatccttta
gaagtgctctgcttgcactttattcagtcaggcagtttcactgaagaggctcagcattgt
tgttgcaggcttatggagatggactcaagtagcagcccaggccttattggtttaggtatc
aaattcctccaagaaaaaaaatatgaagaagctgtcaagagcctaactgaaggtttgcag
cagaccagccagtgtcaagcagcatggtattatctggctgaggcgcaaatgaaaatgcat
aaacacaaagaagctgttatttcctgcaatcgagctcttaagatatcaggacaacttgat
gatgatgatagtggcaatctacagcagaaataccttgcccttcgtttgaaagcagaggct
cttattaaaatagcaggtgctgacactgcagaagaagccattagcactcttgcgcaggtt
tcagatataaataatgacccagtgcttctagctctcaaaggtcaggcttatctgaacaaa
ggtttgattgatcaagcttcaaaggttgcacaacagcttgtgttgtcccacccgcacctg
gcagaagcccatgctcttgaaggtttgattcattatacccagaagaattatcaacaggca
gagagaagctttcaaagagcgattgaaagaaaagctgaaactgcagagtaccattaccac
ctcggactcacttactggttcatgggtgaagaaataaggaaagataaaacgaaagctctc
actcagtttctgaaggctgcaaaactggacagctacatgggaagtgtcttctgctattta
ggccattactacagagatgtagctggagacaaaagcagggctcgtggctgctataaaaag
gcttttgaactagatagaactgatggagaagctggagcagcagctgtagacttaagtgtg
gaacttggagacacggaggctgctctggcaatcttgactgcagtaactgaaagagcaagt
gctggtacagcaaagtgggcctggcttcgtcgtggactttactacctgagagccggtcag
cactctcaagcagtggctgacttgcaggcagctctaagggcagatccaaaggactccaac
tgttgggagtctctaggagaggcatacctgagcagaggtggctatacaacggcactgaag
tccttcacaaaggccagtgagctgaatcccaaatcgatatacagtatttacaaggctgca
tcaattgaacagattctaggaaggtataaagacgctatagctgaataccaacaaatctta
aagaagtcaaaagaatatgtacctgcactcaaaggtctgggagagtgctatctcatgatg
gcacgggctgctcttgcagactatcttgatgggaaagttctagattatgtagaacaagca
cttgaatattttacacgagcgacaaaacatcgtcctgatgtatcttgcctttggaaacta
cttggggatgcatgtactatcgtgcatgttatttcatcatccaaagtgaatgttaaagtt
ctgggatcccttattggtcagaatgtaggcaaacaaatgctgaagaaaagtgagctcctc
agtttgggaggaaggtgttatggcagagcattaaaactgatgtcctcacctaacacatgg
tgtgatcttggaataaactactatcgtcaagcacaacacctaacagcagccgatagtgac
acaaatgagatcagtgaactgttagagaaatctttacagtgtctcaaaaaagccgtgagg
cttgatagtaaaaaccatctctattggaatgcacttggtgtggttgcctgttgcagtggt
gttgggaattatgctcttgctcaacattcattcatcaaatctgttcaagctgaacaaata
aatgttgttgcctggaccaacttgggggttttgtacttagcaactgaaaacattcagcaa
gctcatgaagccttcaaagtagctcagtcccttgagccatcttacttaatatgctggatt
ggacaggctcttattgcagaggctgtaggcagctatgaaactatggatctttttaggcac
accactgaactcagcatgcatactgagggagcaaaaggctatgctcattgggtgtgctca
acactgcaagataaaaccaacagagaaacagagctgtatcggtacaacattgttcaaatg
aatgctattccggcagcacatgtggttttgagcaaatacacagaaagaattcaaaatgat
gcatctgctttcacgatgctgggttatttgaatgaatatctgcaactgaaaaatcaggca
acagatgcttatcaaagggcggtctccttgctgaagaactctgaagataaagagaagtat
aacatagcaatgcaaaattatggtagatcactctgtgccataggtcaatatgacaaggcc
atccaggcttacatgtccactcctctcacagagttagagaacatcgtaggagttgcacta
gcttacttcaagaaagggcttttacaagacagcattaaagcctatgagagagccctgtct
cttgctgaatctgaacaagacaaagcccatattttgactgctcttgcaataatggagtac
aaacagaacaaagtggatgctgcaaagacattgctgtttaaatgctctatattaaaggaa
cttactacagaaagcctgcaggctctgtgcaccctaggtctggcaaagcaggatgctaca
cttgcaacagcagcacttaaagaattactgaagcacacaaaaagcaaggataacgtttat
gagagatgccttattacatctgctgtgtatgcgctgcaaggtagaaatgtgggagtgcag
aggcaagcttccagagctgtccatagtaacccagatgatcctgctctttggtctcttctc
tctcgacttgttcctctgtatacgccacataatgcaaagggtggagctgtggcaggaaat
gttgctcatatgcttgatttaaaccatggaaagaaagccctgctgcatactgcagttaat
cagttggcggtgggatgtcattcagctgaagatgagaaaaacaatgcactgaaggatatc
caaaaggcagtacatctttttccagatgatcctgctacatgggcagtgctaatgggtgcc
tgccatgctgaaaatactgttgtctatttgaacaacacacagcctaagagaagagaccta
gaaatgacacttgtagccacagtttcagccaaaactaaagaaaaggacctctcagctgag
tacattcaggctcttgaagactggtcactttgtcaagctattaccggtttaaaagagact
ggtagaattacagaagctgaggctctctgcacaaggagtttaaaaagttgccccgatcac
ccagatctgttcctgctcttgagacaagttcagtgtaaacagctttttcagtcacacaaa
gagcttccagatactgtcttggaggaacttcataaaactgttatgtccaactccacttca
gtaacagcgtggcattggctggcaaaagtgtaccagtctcaaagaatgatggttgcagca
gagatgtgttacagaaagagtctacaattggcatcccagcagggcagctggaacgggaag
ttatcaagtttgctcaggctagctatgcttgcactggaaatctgtgtggctaacatttca
aatgatcattggccatccttggttcaggaggcaacaactgaagccttgaaactttctttc
tgcccactggctgttcttctgcaagcgctgctacagtacaatcgcaaaatgggggcgagg
gagacgcgtcgaatgttggaaagagtggtatatcagcctgggtatccagaaaccatagta
tcagttgcacgctggtacctcctaagacatttatatgccaaagatgattatgaattaata
gatgcacttgtagcgaatgccaaagctaatggagatattagatctctggaactagacaag
aaattatcagcatctgcctag
DBGET
integrated database retrieval system
