Lepidochelys kempii (Atlantic ridley): 140911648
Help
Entry
140911648 CDS
T11378
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140911648 (VPS13A)
Membrane trafficking [BR:
lkp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
140911648 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140911648
NCBI-ProteinID:
XP_073201204
LinkDB
All DBs
Position
5:complement(95796459..96056377)
Genome browser
AA seq
3205 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLSLGIWGGAVALKNLEIKENALSQLDVPFKVKAG
HIGQLNLQIPWKNLYTQPVEAVLDGVYLLVVPTASIKYDAEKEDRHLLEAKQRELQRIED
AKQKIADQDKGQEEKQDSFVEKLVTQVIKNLQVKISNIHVRYEDDITNQENPLSFGVSLQ
NLSLQTSDQNWNPCLHDEASKLFYKLVRLDNFFAYWNVKSVMFYHGGYDESLNNLKHGVA
CHNMIPEGYDFVFRPISAKAKLRMNPRSDFDFSSPKMNLDVNLQDIAIEFNKPQYFSVME
LLESIDMMTRNLPYRKYRPDVPLHNNAKKWWKYIINGILEVNVQPKLNMWSWEHIRHHRK
QVKNYKEMYKMKITSKNPSEEIIKLLEEFEKSLDIFNITLARQQAEVEVTKAGLKIYRPG
VKQDDENSGGWFSWIWGWAGERNDEKKKEIKGASLEELMTLEEKAKLYAAIGYSETAADP
TLPKTYEAMKLSVKLLSMSISIRENKEKPELIKFAIIDLSTMLTQRPGAQAIRFETKIST
FEVTGMSEEKFIPCLLSSRTIHSENNTSLLTIMFETNPLDGKADQKLRLESQPLEIIYDA
RTVNSLVDFFRPPKDVHLEQLTSATLMKLEEFREKTSTGLLYVIETQKVLDLKINLMASY
VLVPQNGFYESTSNLLLLDLGNLQMMSKSRSDVSDLKVGQSTIEDIMSRAYDSFDIQLSS
IQLLYCKHHENWKEARKLKYSSQHILRPMDVKVEFSRAMVVTDARMPKFKIFGQLPLLSV
QISDQKLMGILELIDSIPKPESGSATMSAPKPTQIAVTPLLATPHVSQNVLPFLELHSLT
ESESEEEFYDAPTSPVEEMPFFEASSGSLTRVNSARRKRVQKQESLKNMTEFQLRFEIPE
VLMQLCRLADGTEKPVLQLEVVGLGTELKLRTFDMAVNAFLREVCLLCPEYMDDKDKPVY
IITTLDNTEDDLLTLEYVKADINGPELKTAYKNVLQLLKVNFSSLDVHLHNEALLNAMNY
LNNLLPKQETKITEELVQEKEEKKDVLKKLTSKKSKYEDVIDLHVCADLSCLRVYIREQK
RRISEIHVEGLDCQVIMRKAATEVFAKLKNIVVMDSDDMALHKKALYITGKEVFSFKMVS
YVDATDGVAYTNMNIVDSQVYLTVGCIQVVFVNKFVSAILAFINNFQAAKEAITEATVQA
AGKAATGVKELAQRSSRIALDINIKAPVIIVPQSADSTNVLVADFGLITMNNQFSVKTKA
RCSLPPVIDSMTVKLSELKLYRTHFERGSLQSEIQLLQPLNLEVTVERNLAAAWYSEVPD
IKILGRLKPINLILSQEDLTTILRTLNENLGDSSGAPPPLPEPKDTSSSCSDALSTSQHS
AGTTMVTTAVVELHSPVKVKTTLKLDFLFDSLTLVLYSPKSKQVSALDQRDDLLKLAEFK
LVLISAAVKMLSDGSMNASVKLANCTLDDKRLTVQKTTPRMVEMKHGSEKKEMVDISYKQ
GRDGTVLDTIVQDLYLCASMEFLLTVADIFLKASAESAAAQRSIKQTSAVKGQASVQLVS
SVERNIVVKNPEIVFVADLTRSDAPALVVTTQCEIFIKNSPQMYKMTAAVKDIQMKACPF
LVEKRKGNITTVLQPCDFFFKMVQSGTNPQMADLSIKSLTIKVSPIIINTVITITSALSP
TTETSEEEITPIPPDLWDKKDIKNLKMWFLEKSNGNENKNTATELVLTGETLNMRIESVI
VTLEAGVGHRTVPMLLAKSSFSGEVKNWSTLINLRSQLELEVHYYNEMFGVWEPLLEPLE
IEKSDEFKPWTLGIKMKKKAKGALESDAEEERYKVPEYKTVINISSKDQLNITLSKCGLQ
MLSNLGMAFAEAASKTSDIFKKDQAPFVIMNSLGLPITVSPSDSFKVLNVESGAKTFHLK
DGESLNMEFLRTKSESDQFAAMTTLSSKMFYIQLSPHKHSTADKIPLTKVGRCLYRVRHE
ESGVERSIVCQIDTAEGSKMITVRSPVQIRNHFSIPLSLFEDGTCLGTASPINEFNIPLT
SYRSLLCLQPVTDETGIGGEYEMCEGISFDEIMKNFGNLIQRKCQSIKSTNHSLIINVVP
VKDTLTSSVCAEDRWDLPYVIHLWPSLLLHNLLPYPITYSLQGNGNKWDTLEDGCSTQIH
NAVLDQTMLELQLLNYLDQNWKSEYHIRTNQQEIGFITFSCITEMDKTELDIAVHVTYTT
GQMIIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKKPLLFSFQPKNFFQNNKVQLMVT
DSELSDQFSLDTVGSHGSVKCKSHKKEYQVGVTIDNSSFNITRIVTFTPFFMITNRSKYT
LEVAEEGKEKWIPITFHQGSENLWEKELDGMCIPFWPENDSNKLLIRVENSNIPPKMICF
NKQENCTLLYLDNKLGGIIVDVNLTEHSTVITLSDYHDGAAPFLLINHTKEEMIEYGQSS
LNVMEDCLMPNKAVLYTWADPVGSRKLKWKCGKCNGEVTQKDDMMDSLLLDKKKRVYLVS
FFEGLQRIILFTEDESVFKATYESEKVELAEQEIVLSLQDVGISLVNNYTKQEVSYIGIT
SSDVVWETKPKKKSRWRPMSIKQTEKLEREFKEYSELSPSENKIVELETNVMVCLTPNGG
NMKIQQPNEIPVRRNYLPALNVEYSTSAHQKSVRVQVYWIQIQNQIPGAIFPSVFYPIKP
PKSITLDSAPKPFIDVSVVMRTAGHSQISRIKYFKVLIQEMDLKLDLGFLYALAELFTQA
EVPKDQEVELFKKDIESVQKELMSMSSTDTSQISLYEYFHISPIKLHLSFSLSTGGEDSN
KEERQHELIPVQSVNLLLKSIGATLTDVQDVVFKLAFFELHYHFCTTQQLQSAVIRHYSK
QAIKQMYVLILGLDVLGNPFGFIRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGVKALV
GGAVGGLAGAASRITSAMAKGVAAITMDEDYQQKRREAMNKQPTGLKEGITRGGKGLVSG
FVSGITGIVTKPIRGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATDS
SDDVTSLRPPRFFCEDGVIRPYRLRDGTGSQMLQKIENGRFAQLKYVTHAMVNNTDLLMI
TKSGILFVTKGTFGQLTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSVFHAKEFGKII
NFRTPEDAKWILSKLDEVRESHPML
NT seq
9618 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcgctggtcgtggacgttctgaaccggttcctgggcgactacgtggtg
aacctggacagctcccagctcagcctgggcatctggggaggagctgtagcacttaagaat
cttgaaataaaggaaaatgcactgagtcagctggatgtaccatttaaagtcaaagcaggg
catattggtcaacttaatctacaaatcccgtggaaaaacctttatactcaaccagttgag
gctgttctggatggagtttatttgcttgtagtgcctacagccagcataaaatatgatgct
gaaaaggaagacagacatctcctagaagcaaagcaaagggaactgcaaagaatagaggat
gcaaaacagaaaatagctgatcaggataaaggacaagaagagaaacaagacagttttgta
gaaaaattagtcactcaggtcatcaaaaatcttcaggtgaaaatttccaacattcatgtt
cgatatgaagatgatatcacaaatcaagagaaccccctgtcatttggggtctcacttcag
aatctcagtttgcagacctcagatcaaaattggaatccatgtttacatgatgaagcttcc
aagttgttctataagcttgtacgtctcgataacttttttgcttactggaatgtgaagtca
gtgatgttctaccatggaggttacgatgaatctttgaataatttaaagcatggagttgcc
tgccacaacatgattccagaaggttatgattttgtattccgtccaatttccgctaaagcc
aaactccgtatgaatcctcgatctgattttgacttttcttcaccaaaaatgaacttagat
gtaaatttacaggatatagccattgagttcaataaaccacagtacttcagtgttatggag
ctccttgagtctattgatatgatgacccggaatctgccataccggaagtacagacccgat
gttcctttgcacaacaatgccaagaagtggtggaaatacattattaatggtattctggaa
gtaaatgttcaacccaagcttaatatgtggtcatgggaacacattcgacaccatagaaaa
caagtgaagaactacaaagagatgtataaaatgaagataacatcaaagaacccaagtgaa
gagatcataaaattgttagaggaatttgaaaagtccctggatatatttaacatcactcta
gcaagacaacaggcagaagttgaggtaactaaagctggattaaagatttacagaccaggg
gtaaaacaagatgatgaaaattctggtggttggttcagttggatatggggttgggcagga
gaaagaaacgatgagaagaaaaaagaaataaagggtgcaagtcttgaagaattgatgaca
ctggaagaaaaggctaaactctatgcagcaattggatatagtgaaacagctgctgatcca
acattgccaaaaacatatgaagccatgaagctttctgtaaagctattaagcatgtccata
tcaataagggaaaacaaggagaaacctgagctgatcaaatttgcaataattgacttgagc
acaatgttaacgcaacgaccaggtgctcaagcaataagatttgaaacaaaaataagcaca
tttgaagttacaggcatgtctgaagaaaaattcataccctgtctgctatcttctcgaaca
atccattcggaaaacaatacctcactcttaaccataatgtttgagaccaatcctttagat
gggaaagctgatcagaagcttcgactagaatcacagccactggaaataatatatgatgca
aggactgtgaatagtttagtggatttcttcaggcctccaaaagatgtacatttagagcaa
ctgacctcagcaactttgatgaagcttgaagaatttcgtgagaagacatcaacaggatta
ttatatgttattgaaacacagaaagttctcgatctaaaaattaatttaatggcttcatac
gtccttgttccacaaaatggattttatgaatctacgtcaaatttacttcttctggatctt
ggtaacctacagatgatgagtaaaagtcgttctgatgtgtcagatctcaaagtaggacaa
agcaccattgaagatatcatgtcaagagcttatgatagctttgatattcaactcagcagt
atacagctactttactgcaaacatcatgaaaattggaaggaggctcgtaagctaaaatat
tcttcacaacatatcttgcggcctatggatgtgaaagtggaatttagcagggcaatggtt
gtcactgatgcaagaatgcctaaattcaaaatttttggacaactgcctttgctctctgtt
caaatctctgatcaaaagctgatgggtatcttggagctaattgacagcattcctaaacca
gaaagtggttctgctaccatgtctgctcccaagccaactcagattgcagtcactcctctg
cttgcaacaccgcatgtctcacaaaatgtacttccatttttggaacttcattcattaact
gagtcagaatcggaagaagaattttatgatgcccccaccagtcctgtggaggagatgcca
ttttttgaggcatcttctggctctctgaccagggttaacagtgccagaaggaaaagggta
cagaagcaagaatctttgaagaatatgacagaattccagctaagatttgaaatacctgag
gtcttaatgcagttgtgtcgtcttgctgatggtactgaaaagcctgtgctgcagctagaa
gttgtaggattaggcactgaacttaaactaagaacatttgatatggctgtaaatgctttt
cttagagaagtctgtttactgtgtccagagtatatggatgataaagacaaacctgtttac
atcattacaactttggataatacagaggatgatcttcttacactggaatatgtaaaggct
gatattaatggacccgaattgaaaacggcttacaagaatgttctgcagctgttaaaggtg
aatttctcctctctagatgttcatttgcataatgaagcacttctaaatgccatgaattac
ctaaataatcttctaccaaaacaagagactaaaataacagaagagctagtccaggaaaaa
gaagagaaaaaggatgttcttaaaaaattaacatcaaaaaaatccaagtatgaggatgtc
atagacctacatgtctgtgcagatttatcctgtttgcgggtttatattagagaacaaaag
cgcagaatatctgaaattcacgtagaaggtcttgattgccaagtgatcatgaggaaagca
gcaactgaagtgtttgcaaaattaaagaacatagttgttatggattctgatgatatggcg
ttgcataaaaaggctctttatatcacaggaaaagaagtcttcagttttaaaatggtgtcg
tacgtggatgctacagatggtgttgcctatacaaatatgaatattgtggacagccaggtt
tatttaactgttggttgcattcaagtagtttttgtcaacaagtttgtttcagctattttg
gcttttataaataacttccaagctgctaaggaagctattaccgaggcaactgttcaagca
gcagggaaagcagctacaggtgtaaaagaattggcacaacggagttcccgaatcgcactg
gatattaatattaaagcacctgtaatcatagtgccacagtcagcagattctactaatgtc
cttgttgctgattttggtctaattaccatgaataatcagttctctgttaaaacaaaggca
cgatgtagccttccacctgttattgactctatgacagtgaagctgagtgaactaaaacta
tacagaacacattttgagagaggttcgttacaaagtgaaatacagctgttgcagccacta
aatttggaagttactgttgaacgaaatttagctgctgcctggtatagcgaagtgcctgat
attaaaatacttggacgacttaaacctataaatctcattctcagtcaggaggacttaacc
actatattgaggacactgaatgaaaatttaggggacagttctggtgctccacctccttta
ccagaaccaaaagatacaagtagcagctgcagcgatgccctcagtacttcccagcattct
gcaggaacaactatggtaacaactgctgtggtggaattacattcacctgttaaagttaaa
acaacactaaaactggacttcctattcgactctctcactttggtattatatagtccaaag
tctaaacaggtttctgctttggatcaaagagatgatcttttgaaacttgctgagtttaaa
ttggtcttaatatcagctgctgtcaaaatgttgtcagatggttcaatgaatgcttcagtc
aagttagcaaactgcacattagatgataaacgactgacagtccagaagacaactccaaga
atggtggaaatgaaacatggatctgaaaagaaggagatggtggatataagctacaagcag
gggagagatggcactgttctggacacaattgttcaagacctatatctctgtgcgagcatg
gaatttctacttactgttgcagatatatttttaaaggctagtgcagaaagtgctgctgca
cagaggagtatcaagcaaacttcagcagtaaaggggcaagcatctgtgcagctggtatct
tcagtggaaaggaacattgttgttaaaaatccagagattgtgtttgtggctgatttaaca
agaagtgatgctcctgcattggtggttacaacacagtgtgagatcttcattaagaacagc
cctcaaatgtataaaatgacagctgctgttaaagatatacaaatgaaagcctgccccttt
cttgtagaaaagagaaaagggaacattactacagtattgcagccttgtgatttcttcttc
aaaatggtgcagtctggtactaatccacaaatggctgacctatcaattaaatctttaaca
ataaaggtttcacccattatcataaatacagtgattacgattacatcggcactttctcca
actacagagacttcggaagaagagattactccaattcctccagacctgtgggataagaaa
gatataaaaaatttaaaaatgtggtttcttgaaaagtcaaatggaaatgaaaataaaaat
acagcaactgagttggttctcacgggggagacattaaatatgagaattgaatcagtcatt
gtaactcttgaagctggagttggtcacagaacggtacctatgcttttagcaaagtcgtcg
ttttccggagaagtcaaaaattggagtacgctcatcaacctccgttcccagcttgaactg
gaggtgcattattataatgagatgtttggtgtgtgggaacctttgcttgaaccactagaa
attgaaaagagtgatgaattcaaaccatggactcttggaatcaagatgaaaaagaaggct
aaaggagcattagaatcagatgctgaagaagaacgctataaggtaccagaatataaaaca
gtaataaacatctcctcgaaagaccagctgaacattacactatccaaatgtggactacaa
atgttgagtaacctgggcatggcatttgctgaagcagctagcaaaacttcagacatcttc
aaaaaagatcaagcaccatttgtaataatgaattccttaggacttcccatcactgtctca
ccgagtgattcctttaaagtccttaatgttgagtctggagcaaaaacatttcatttaaaa
gatggggaaagtctaaacatggagtttctcagaactaaaagtgagagtgaccagttcgca
gcaatgaccaccctaagcagcaaaatgttttacattcagctcagtcctcataaacactcc
actgctgacaagattccgttgacaaaagtgggtcgatgtctttatagagtaagacatgag
gagtcgggtgttgaaagatccattgtttgtcaaattgatacggcagaagggagtaagatg
ataactgtacgttctcctgtacagataagaaatcatttttcaattccactgagtcttttt
gaagatggaacatgtctaggaactgcttcaccaataaatgaatttaacataccactgacc
tcttacagatcactactttgtttgcaaccagtaactgatgaaactggaattggtggagaa
tatgaaatgtgtgaaggaattagctttgatgaaattatgaaaaattttggcaacttaata
cagaggaaatgccagtccataaaatcaactaatcattcacttatcattaatgttgtgcca
gtaaaagataccttgacatcttcagtatgtgcagaagatcgatgggatttaccatatgtt
attcatttatggccctctctcctcctccacaatcttcttccttatccaattacttattct
ctacagggaaatggtaacaaatgggacactctagaggatggatgttcaactcagattcat
aatgcagtattggatcaaaccatgctggaattgcagttacttaattatcttgatcaaaat
tggaaaagcgagtaccatataagaactaatcagcaagaaattggcttcatcacattctct
tgtatcactgaaatggataagactgaactagatattgctgttcatgtgacctatacaact
ggacaaatgatcatagcaattcacagtccgtattggatggtaaacaaaactggccgaatg
ttgcaatacaaagctgatggcattcaccgcaagcatcctcctgattacaaaaagccactt
cttttttctttccagccaaaaaatttcttccaaaataacaaggtgcagcttatggtgact
gacagtgaactgtctgatcagttttctcttgatactgttggtagtcatggttctgttaaa
tgtaagagtcacaaaaaggagtaccaagttggtgttaccatagataacagcagttttaat
attacaagaatcgtcactttcacccccttttttatgatcacaaacagaagcaaatatact
ttagaggtagctgaagaaggcaaggaaaaatggattcctatcacttttcatcaggggtct
gagaatctatgggagaaggaacttgatggcatgtgcattcccttttggcctgaaaatgat
tcaaataaactgctgattagagttgaaaattccaacattccccccaagatgatctgtttt
aataagcaagaaaactgtacattgctgtatttggacaataagcttggtggcattatagtg
gatgttaacctgaccgaacattctacagtaattactttatcagattaccatgatggtgca
gctccattcctgttaattaatcataccaaggaggagatgattgagtatgggcagagttct
ctcaatgtgatggaagactgtcttatgccaaataaagcagtactgtacacctgggctgat
ccagtaggctcgagaaagttgaaatggaaatgtggaaagtgcaatggggaagtaacgcaa
aaagatgacatgatggactctctcctcctggataaaaaaaagagagtttatttagtttca
ttttttgaaggcttgcaacgtattatcctattcactgaagatgagagtgtatttaaagca
acatatgaaagtgaaaaagtagaactagcagaacaagaaattgttctatcgttacaagat
gttggaatttctttagtcaacaattatacaaagcaagaagtgtcctacattggaattaca
agttctgatgtagtttgggagacaaaacccaagaagaaatcaaggtggaggccaatgagc
attaagcaaactgaaaagttagagagagaatttaaagaatacagtgagctgtccccttca
gaaaacaagattgttgagctggaaacaaatgttatggtttgtttaactcctaatggtggt
aacatgaaaatccaacaaccaaacgaaattcctgtaagaagaaattatttgccagcttta
aatgtagaatatagtacatctgcgcatcaaaagtccgtcagagtccaagtttactggata
cagatacaaaaccagattcctggagccatatttccttctgtgttttatcctattaaacct
ccaaagtccatcaccctggattcagcaccaaagccgtttattgatgtgagtgttgtcatg
aggactgcagggcattctcaaatatcgcgtattaagtactttaaggtgctgattcaggaa
atggatctcaaattagatcttggattcctgtatgcattggctgaactctttacacaggct
gaggtgcccaaagaccaagaggttgaacttttcaaaaaggatatagaatctgtccaaaaa
gaattgatgagtatgtcatcaacagatacatcacaaatcagcttgtatgaatattttcat
atctctccaatcaagttacatttaagtttctcactgagcacgggtggagaagatagtaac
aaagaagaaagacagcatgaactgattccagttcaatccgtgaaccttctgctgaagagt
attggtgccacactcacagatgtacaagatgttgtctttaagttggctttcttcgaactc
cactatcacttctgtactacacaacaactacaatcagcagttattaggcattattcaaaa
caggccattaaacaaatgtatgttcttattcttggccttgatgttttgggcaatccattt
ggattcataagagacttgtctgaaggagtagaagcattcttctatgaaccttaccaggga
gccatccagggtcctgaagaatttgtagagggaatggcacttggtgttaaagcactagta
gggggagctgtaggaggattagcgggtgctgcatcaagaatcactagtgctatggctaaa
ggagtagcagcaataactatggatgaagactaccagcagaagagaagggaagccatgaat
aaacaaccaactggccttaaagagggcatcactcgtggagggaaaggcttagtgtctggt
tttgttagtggcataacaggaatagtgacaaaaccaataagaggagcccagaaagaagga
gcagctggtttcttcaaaggtgttgggaaaggtttagtgggagcagtagcaaggcccact
ggaggaatcatagacatggcaagcagcacatttcagggtattaaaagagctacagattca
tctgatgatgtgacaagtctgcgcccacctcgtttcttttgtgaggatggagttattaga
ccttacaggttaagggatgggaccggaagtcagatgttacagaaaattgaaaatggaaga
tttgcacaactcaaatatgttacacatgccatggtcaataatacagatttgttaatgata
acaaaaagtggtattttgtttgtgacaaaaggaacatttggacagctgacatgtgagtgg
cagtacacttatgatgagtttaccaaagagccattcattgttgatggaagaagattacgc
attgaagccaaggaacgagttaagtccgtatttcatgccaaagagtttggaaaaataatt
aattttaggactccagaagacgccaagtggatcctttctaaactggacgaagtgagagaa
agtcatccaatgttgtaa
DBGET
integrated database retrieval system
