Lepidochelys kempii (Atlantic ridley): 140911972
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Entry
140911972 CDS
T11378
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140911972 (SHOC1)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
140911972 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
140911972
NCBI-ProteinID:
XP_073202230
LinkDB
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Position
5
AA seq
2111 aa
AA seq
DB search
MFAALKYHAVDYLYENVARQKFSIDRLSFRVPPCLHQDENYHHTGVFADDKYRRPWTRVS
VVSTQKMMDISVLDQWKQSLYVEDFLEKKPISCTEFHINNELIEVVPSSNPYSQTDTEEA
YLLTKNDYKEEFTQVICVKPDYVPVLKAQDQDLYIADELVFVDNLEEYRKQLPTLHTLLA
RLKNFLVKDPLLNSKGQILTEENLFRECLTFQSNAETHENEKELHVAKEIFCRMSLNDEE
SLMLPVELESKKTTNFRQKVEIPSCLELKELLKLAPEIIADESRSEKQIKDLTANITNEI
EISKYCPTMEEVCFNQNRNPLECSEAVSYALCPQYEVEIPLTPPCRPQKSHVNSLHAGLQ
AEPISPVGNSILLTETTKKNLECLVWQSEKYQNAVNSLLLEENQTVEPTFQHHTVTELKK
IMSVHVEAPVFSPLKSDWWIHSGLNLVLPDSLEQLSTDLGSANSLFSTEEEVFSQITQFQ
LERWLEEKSSLTNQGLLSVSAYHWDKTTNSHFSPEKKSPFPPLHLGAAPHVNICDANTSV
EWLTRQENQHSETEGPMHFLYQEKKRKDLSDSLNCKEGSFEPNSSTKSQKTLPFKQSRQC
DDDSDLLNSFIMLRSKHVFIQNEEKINLDRQKEALEIKECPEVLKQDSSAVCKATLTEKT
EQENQGSISVKIQASESQCQAYHLLEATATPVLKELMHLGILAAVNWRFATVKFDHTRFF
LKQQEKVICDIFKQGKNSEKEIMLFKHAALVHLLVTVRDLLLMCSLDTALGYLSKAKDIY
TSVLGSCLDNIWRQLEIVQYSRQKKNEISPKITELQYQMLKWVQSNTDEQNHKVLIITRM
DSDHEKAAITKTLSTVEGLKAMVLNPEKRGVLLEHNVVSSLSRCSCVIVHNQHIGADFPW
TLFSLVVEYDYTENSCWNELCKNLNITYVTFKTTLPETLVVAVTLFIFKSENVSGENFGC
FLLELQIPYVFLTSEGLLNAPEILQLLESKYNITFVERSCSESLQLFGGTDRYIVVTIDE
RTAIIIETLEELNYEKSSDNIILRLVALSLQYSCCWIILYSRERLNSEYSLTGKTLHHLS
LIYAALVPFSQKSEDFEVKVALVPGVEETALLIRQISDNILMSSKTNPHEWLDKSWLSIL
PSEAEKCLLTFPCINPLVAQLLLKKGSSLKWLLLATFDQLQELLPEVPEKVLKHFCDITS
LYNLNSSIPPKSPKKTISPQEQWSCFNMTFPQASFSKSLLSNIQGDYQYSELLDNIQNSP
SQSLNYYKNESCSPLRSSERQSMLTSLLSYCGQVSCFETDHNISGQQYLPFLKNVGTERE
ASSSLLKQRDSDVFSLESSHVNHEARISPPETTKEDYDSVSSKDTEENLTIPISKDVYEI
LMRRESCLHDLIEKKFGCMSLFKTIRCPLEVYRKSLKEGIEISVWMDDMTRHNADALVNV
AHEHLHHIGGLALALVKAGGPEIKQGSKRYIERQGTLTIGQIAVTGGGRLSCKKIIHTVG
PRWSANESERCCHLLETAIINVLKYVNTPENNIKSVAIPAVSSGICGFPLDLCAHVMVRT
IKNFVELAPLFGWFKEIHLVNVAESTATAMRKACEELLGRSDINALQETPPASANQLPDS
ITINGLCLHIIRGHIEDQQTAVIVNSVVMNDDLSRGNISRAILEKAGLSLQKEFLFELQK
LPPYCEKFILTKGYNLACKSVLHIVWSSQSSSDSRKGLKTAMSRCLLKIQEYQLPSISFP
AIGTGVLNLPNDEVADIMIDKVLSFAKEHPWKKTDVYFVIHPNDSYVYKAFQTKLHSAKN
KLIKDTECNKRDYLGSRSDRQAEIENQKTGPAIELIGNCYEKLEAAKIWIEDIMQVQESH
FIVIENNHIFNLSKREHAELSHLQRFGISILEEVVDGKARLEIKGPPGAIIDAVFVIENL
LCYVQENNTVKEEELLQSEGRLETNYPPEKLRDKTRDTKMHYQISEADLYCQEFKDREKQ
FEKAGLCVLKQSSKNFQGEFRGLPYRCPEAQVEETLWSEYPSSHALDSFAPDLRLCDSVA
NPDEYRSLNFHQIAGEFSGKRRPSASLSNLIEKDVLTDGLGFAQVPQLKKRRLTFEKAPG
RSDGQTRLKFF
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagctcttaaatatcatgcagtagactatttatacgagaatgtggcaagacag
aagttttctattgatcggttatcatttcgtgttcctccctgtttacatcaagatgagaat
taccatcatactggagtctttgctgatgataagtacaggaggccatggacaagagtttca
gttgtttccacacaaaaaatgatggatatttcagtcctggatcaatggaagcaaagttta
tatgtagaggatttcctggagaagaaaccaatttcatgcacggaattccatattaataat
gaactcatagaagttgttccaagttcaaatccctactcacagactgacacagaagaagcc
tatttacttacgaagaatgactacaaagaagaattcacccaagttatttgtgttaagcct
gactatgtcccagtacttaaagcacaagatcaagatttatatattgcagatgaacttgtt
tttgttgataatttggaagaatatcgtaaacaactacctactctgcataccctcttggct
agactaaaaaatttcttagtgaaggatcccctcttaaattctaaaggacagattttgact
gaagaaaaccttttcagggaatgtttgactttccaaagcaatgcagagacacacgaaaat
gaaaaagaactacatgtagctaaggaaattttttgtcgaatgtctttaaacgatgaggag
tcattaatgctgcctgttgaattagaatccaagaagacaacaaacttcagacagaaagtt
gagattccatcgtgcttggaactgaaagagttgttaaaattagcaccagaaattatagca
gatgaaagcaggagtgaaaaacaaatcaaagatcttactgcaaatattacaaatgaaata
gaaatttcaaaatactgtcccacaatggaagaggtttgtttcaatcaaaacagaaatcca
ctggaatgcagtgaggcagttagttacgctttatgtcctcaatatgaagtagaaataccg
ctaactccgccatgcagaccacaaaaatcacatgtgaattcacttcatgcaggacttcag
gcagaacctatttctcctgttggtaacagtattctgcttacagagacaactaagaagaac
ttagagtgcctggtgtggcagtcagaaaaataccaaaatgctgtgaactctcttttgctt
gaagagaatcagactgttgaacctacatttcaacatcatacagttacagaactgaaaaag
attatgtctgtccatgtggaagctccagtgtttagcccattaaaatcagactggtggatt
cattcaggactaaatctggtattaccagattctttggagcaactaagcactgatttgggt
agtgcaaatagcctgttttctactgaagaggaagtattctcacaaattacacaatttcag
ttagaaaggtggcttgaagagaagagttcccttactaatcaaggactgctttctgtcagt
gcatatcactgggacaaaacaacaaattctcatttctcacctgaaaagaagagcccattc
cctccattacatttgggagctgcacctcatgtcaacatatgtgatgcaaatacatctgtt
gaatggctaacaagacaggaaaatcagcacagtgagacagaaggaccaatgcatttctta
tatcaagaaaagaaaagaaaagatttgtctgactcacttaactgtaaagaaggatctttt
gaaccaaacagctcaacaaaaagccagaagactctaccattcaaacagtctagacaatgt
gacgatgattctgaccttctgaacagttttatcatgctaagatctaaacacgtgttcatc
caaaatgaggaaaaaattaatttggataggcagaaagaggcactggaaattaaagaatgt
ccagaagttcttaagcaagacagttctgctgtttgtaaggctacattgacagagaaaaca
gaacaggagaatcaaggcagcatctcagtcaaaattcaagcatcagaaagccagtgccag
gcataccatctgttagaagcaacagccactcctgttctaaaagagttgatgcatcttggc
atacttgccgcagtgaattggaggtttgccacagttaaatttgatcacactagatttttc
ttaaaacagcaggagaaagtgatctgtgatatttttaaacaaggtaaaaatagtgagaaa
gagataatgttgttcaaacatgctgctctggtgcatctgttggtaacagttcgagacctc
ctattaatgtgtagcttggacacagcattagggtatttgtccaaggcaaaggatatctat
acaagcgtcttaggttcctgtttggataatatttggaggcagctggagattgtacagtat
agcaggcagaaaaagaatgaaatcagtcccaaaataacagagcttcagtatcagatgtta
aagtgggtgcagagtaatacagatgaacagaatcataaggtactaatcataacaagaatg
gactctgatcatgaaaaagctgccatcactaaaacccttagtacagtagaaggtttaaaa
gccatggttttgaatcctgagaaaaggggagttttgttagagcacaatgttgtaagcagt
ctgagcagatgttcctgtgttattgtacataatcagcacattggagctgactttccttgg
acacttttctcattagtggtggagtatgattatacagagaactcctgctggaatgagctg
tgcaaaaatttgaatattacttacgtaacttttaaaaccactcttccagaaacacttgta
gtggctgttacattatttatctttaaatctgaaaatgtttcaggtgaaaattttggctgc
ttccttctggagttgcaaattccgtatgtgtttctgacatctgaaggacttcttaacgca
ccagaaatccttcagcttctagaatccaagtacaatattacttttgttgagagaagttgc
agtgaatcattacagctctttggaggtacagatcgatacatcgtggtaacaatagatgaa
cgcactgccataattattgagactttggaagaactgaattatgagaaatcctctgataat
atcatattaagactggtggcactatcactccaatacagttgctgttggatcattttgtat
tccagagagagactgaattcagagtacagcctcacaggaaagactctgcatcatctatcc
ttaatttatgctgctttggttccattttcacagaaatcagaagactttgaagtgaaggta
gctcttgtgccaggggttgaagagacagcattgttaattcgtcagatttctgacaacatt
ttgatgtcttctaaaacaaatcctcatgaatggttggacaaatcctggctttctatcttg
ccatctgaggcagagaagtgcttgcttacttttccatgtataaaccctctagtagctcag
ctcctgctaaagaaggggtcttcactgaagtggctgttgttggcaacttttgaccaactt
caggaactcctgcctgaggttccagaaaaagttttaaagcatttttgtgacatcacttct
ttgtacaacctaaattcttccattcctccaaaatcacccaagaaaaccatatcaccccaa
gaacaatggagctgcttcaacatgacctttcctcaagcttcattttccaagtctttgctc
tccaatattcaaggagattatcagtattcagaattgcttgacaacatacagaacagccca
agtcagtccttaaattattacaaaaatgagtcttgttctcctttgagatcaagtgagagg
caaagcatgttaacatctttgctgtcttactgtggacaggtcagttgctttgagacagac
cataatataagtggtcagcagtaccttccttttctgaaaaatgtgggaacagagagagaa
gctagttcctcactcttaaaacagcgtgattcagatgtattttctttggaatcaagccat
gtgaatcatgaagccagaatctcaccaccagagaccactaaggaggattacgattcagtg
tccagcaaggatacagaggagaatttaacaattcccatcagtaaagatgtttatgaaatc
cttatgagaagagagagctgtctacatgacctcattgaaaagaagtttggttgcatgtct
ctctttaagactataagatgtccccttgaagtatacaggaaaagcctgaaggaaggaatt
gagatatctgtttggatggatgatatgacaagacataatgctgatgctttggtgaatgta
gcccatgaacatctgcaccatattggaggccttgctcttgccctggtgaaagctggtggg
ccagaaattaagcaagggagtaaacgttacattgagcgccagggaactctcaccattggc
cagatagcagtgacaggcggaggcaggctttcttgtaagaaaattatccatacagtaggt
ccaagatggtctgcaaatgaaagtgagagatgttgtcacttgcttgagacagccattata
aatgtcctgaaatatgttaatactccagagaataatataaagtctgttgcaatccctgca
gtgagctcaggaatttgtggcttcccactagatttatgtgctcatgtgatggtacggact
ataaagaattttgttgagctggctccattatttggctggttcaaagaaatccacttggtg
aacgttgctgaatccacagctacagcaatgagaaaggcctgtgaagagttgctgggcagg
agtgacatcaacgcactgcaggagactccaccagcttcagcgaaccagcttccagattcc
atcacaatcaatggtctctgcctacacatcataagaggacacattgaagatcagcaaact
gcagttattgttaattctgtggtcatgaatgatgatctctcaagaggaaacatttcaaga
gcaattctggaaaaagcaggcctatctcttcagaaggaatttctgtttgagttacaaaaa
cttcctccatactgtgagaaattcatattgacaaaaggatacaatcttgcctgcaagtct
gtgctccacatagtatggtcctcacaaagcagcagtgattcacgcaagggactaaaaact
gcaatgtcaagatgtttgcttaagattcaggagtatcagcttccctcaatttccttccct
gcaattgggactggagtgttaaatttgccaaatgatgaagtggcagatattatgattgac
aaagttttaagctttgcaaaggaacatccttggaagaagacagatgtgtattttgtgatc
catccaaatgacagttatgtctataaggctttccaaaccaagttacattcagcaaaaaac
aaactgataaaagacacggaatgcaacaaaagggattatttggggtcacgctccgacaga
caagctgaaatagagaatcaaaaaactggaccagccattgaacttattgggaactgctat
gaaaaactggaagcagcaaaaatatggattgaagacataatgcaagtccaggaaagtcac
tttattgttatagaaaacaatcacatttttaaccttagcaaaagagagcatgcagaactt
tctcatctgcagcgtttcggtatatccatattggaagaagtggttgatggaaaagcaaga
ttagagattaaaggtccccctggtgccataattgatgcagtgtttgtgatcgaaaactta
ctgtgctatgtgcaagaaaataatacagtcaaagaagaggaactgctgcagtcagagggc
cgactggaaactaattatcctccagaaaaactccgagacaaaacaagggataccaaaatg
cattaccagatctcagaagcagacttatactgtcaggaattcaaggaccgagaaaaacag
tttgaaaaagctgggctttgtgttctcaagcaaagctctaagaattttcaaggagaattt
agaggcttgccatatcgctgtccagaagctcaggttgaggagacgctttggagtgaatat
ccatccagccatgcattggattcatttgcacctgacctccggctctgtgattcagttgca
aacccagatgaataccgtagtctgaattttcaccaaatagctggagagttttcaggaaag
agaaggcccagtgcatcattatcaaacttaatagaaaaggatgttttaacagatggttta
ggctttgcacaagtaccacagctcaaaaaaaggcgactaacatttgaaaaagcccctgga
agaagtgatgggcaaactcgtcttaaattcttttga
DBGET
integrated database retrieval system
