KEGG   Lepidochelys kempii (Atlantic ridley): 140912237
Entry
140912237         CDS       T11378                                 
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin-2
Organism
lkp  Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:lkp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lkp03019]
    140912237 (ATXN2L)
Messenger RNA biogenesis [BR:lkp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140912237 (ATXN2L)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 DUF5415
Other DBs
NCBI-GeneID: 140912237
NCBI-ProteinID: XP_073202467
LinkDB
Position
6:134049..162010
AA seq 1025 aa
MEGPRALRWCPTMPILTALVSSSNSTTLQPDVAFRGIPYTPAECFHQIRKHPRGSKEDMF
QEVLQYSDAEKRERRGQSTGKGPPQSPVFEGVYNNSRMLHFLTAVVGSTCDVKVKNGSTF
EGIFKTLSSKFELAVDAVHRKTPDQLVGPKREDIVDTMVFKPTDVMLVHFRNVDFNYATK
DKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLESDMSNGWDPNEMFKFNEENYG
VKTTYDSSLSSYTVPLEKDNSEEFRQREARAAQLAREIESSPQYRLRIAMENDDGRTEEE
KHSSVQRQVSGRDSPILASREGKYVPLPQRVREGSRGGVRCSSSRGGRPGAGSMPPRGSA
HHPDSNSSPVPEQRGINGGPSRMSPKSQRPIRGAKTMSSPSSRPVEVSAAPPAVGRMYPP
RSPKSASATPVSSQDSSVGSAVPAAPASPSEARTGLESSVSPNPPSPKVAAPVPATAVEG
KEAPTSVAKDPGRTLEVTGSCELNKATNKAGLQNEQKRTQLEELRKFGAQFKLQPSSSPE
ASLESFSARPKEPLEGKEKALEPGICEGPEQAPAVSMVPKPSGTSLELLPESGKEEKGLC
EVAEQQVASPPGKGEPEDKEEGPVSEQVKKSTLNPNAKEFNPSKTLLSVNKSTSTPTSPG
PRAHSTPSIPVITAGQTGMYSPQYISYIPQIHMSPAVQAPQMYPYPVSSSVPGQQGKYRG
AKGSLPPQRSDQHQPTSAPPIMQAAAAAGPPLVAATPYSSYISYNPQQFTGQPTMMQPMA
HYPSQPVFAPMLQSNPRMMTSGSHPQAIVSSSTPQYPPSEQPTPQTLYATVHQSYPHHAT
QLHPHQPQPATTPTGNQQQAQHAAPSPVQHQAGQPPHLAGAQQQQNLYHTATLTATPPSI
TPGPSAQSPQSSFPQPAVYAIHAHQQLQHSYTNMAHVTQAHVQTGITAAPPPHPGAPHPP
QVMLLHPSQTHGGPPQGGVPQSGVPTLSASTPSPYTYIGHHQVSPIPAAPIPPPWKLKPR
FLTVN
NT seq 3078 nt   +upstreamnt  +downstreamnt
atggaaggccccagagctttgagatggtgtcccacaatgcccatcctgactgctctggtc
agcagttccaattccactaccctgcagccagatgtggccttcagaggcatcccctacaca
ccggcagagtgcttccaccagataagaaagcatccaagagggagcaaggaagacatgttc
caggaggtgctgcaatactcagatgcagaaaagagggaacgcagggggcagagcacaggg
aaggggcctccccagtctccagtgttcgaaggtgtctataacaattctcgaatgctgcat
ttcctgacggctgttgtgggctccacatgtgatgtgaaggtgaaaaatggcagcaccttt
gaggggatttttaaaaccctcagctctaagtttgagctcgctgtggatgcggtgcacagg
aagaccccggatcagctggtgggacctaagcgggaggacatcgtggacaccatggtcttc
aagcccacggatgtcatgctggtgcatttccgcaatgttgatttcaattacgccaccaaa
gacaagttcacggactctgccatcgccatgaactccaaggtgaatggggagcacaaagag
aaggtgctgcagcgctgggaaggaggggacagcaacagtgatgactatgacctggagtct
gacatgtctaatggctgggatcccaatgagatgttcaagtttaatgaagagaactatgga
gtgaagacaacgtacgacagcagtttgtcctcctacaccgttcctctagagaaagataac
tcggaggagttccggcagcgggaagcccgggcggcccagttggcccgggagattgagtcg
agcccccagtaccgcctgcgcattgccatggagaacgacgatggacggacggaggaggag
aagcacagctctgtgcagaggcaggtgtccggcagggacagccccatcttggcctccagg
gagggcaagtatgtcccgctgccacagcgcgtcagagagggctcacgaggaggcgtccgg
tgcagcagctctcggggtgggaggccaggggcggggtccatgcctcctcggggcagtgcg
caccatccagacagcaactctagtcccgtcccggagcagcgagggatcaatggaggaccc
tcccgaatgtctccgaagtcccagcgtcccatccggggtgccaagaccatgtcttccccg
tcaagccgccctgtggaggtctcggcagctccccctgcagtgggccgcatgtaccctcct
cgctctcccaagtctgcctcagccactccagtctcttcccaggattcttcggtgggatcc
gccgtgccagcagcacccgcatccccgtcagaggccagaactggcctggagtcgagtgtt
tccccaaaccccccttctcccaaagtagcagcccccgtgccagccactgctgttgagggg
aaagaggctcccacatctgtggctaaagatcctggcagaaccttggaagtgaccggatca
tgtgagctcaacaaggcaaccaacaaagcagggctgcagaatgagcagaagcggacccag
ctggaggagctgcgcaagtttggggcccagttcaagctccagccgagcagttccccagag
gccagcctggagtccttcagtgccaggcccaaggagcctctggagggcaaggagaaggcc
cttgagccaggcatctgcgaggggcccgagcaggcacctgccgtgagcatggtgccaaag
cccagtgggaccagcctggagctgctgccggagagtggcaaagaggagaaggggctgtgt
gaggtggccgagcagcaggtggccagccccccgggcaagggcgagcccgaggacaaagaa
gagggacctgtgtccgagcaagtgaagaaatcgactctgaatcccaacgccaaggagttc
aacccctcgaaaacactgctctccgtgaacaagtcaacgagcacccccacgtcaccgggc
cctcgcgcccattccactccctccatcccagtgatcacagccggccagacgggcatgtac
agcccccagtatatttcctacatacctcagatccacatgagccctgctgtccaggcgccc
cagatgtacccctaccctgtctccagctctgtgcctggccagcagggcaagtaccgaggg
gccaaaggttccctcccaccccagcgctcggaccagcatcagccaacatccgcccccccc
attatgcaggcggcagcggcagcagggccccccctggtagcagctacgccctactcctcc
tacatttcctataacccccagcagttcacggggcaacccaccatgatgcagcctatggcg
cactacccttctcagcctgtattcgcccccatgctgcagagcaatccccgcatgatgaca
tctggcagccacccccaggccattgtgtcgtcctccacgccccagtaccctccctcggag
cagcccacgccccagacgctctatgctacagttcatcagtcttatccccaccatgcaaca
cagctgcacccccaccagcctcagccagccaccaccccgacagggaaccaacagcaggcc
cagcatgctgcccccagccccgtgcagcaccaggctgggcagccgccccacctggccggt
gcccagcagcagcagaatctgtaccacacagccacgctgacggccacgccaccctccatc
acgccagggcccagcgcccagtccccccagagcagcttcccccagccggctgtctacgcc
atccacgcccaccagcagctgcaacacagctacaccaacatggcccatgtcacccaggcc
catgtccagactggaataacagcagcaccgcccccccaccccggggcgcctcatcccccc
caggtcatgctgctccacccctcgcagacccatggggggcccccccaaggcggcgtgcca
cagagcggggtgcccaccctctcagcctccacaccatctccatacacctatataggacac
catcaagtctcacccatcccagcagctcccattccacccccctggaaattgaagcctcga
ttcctgactgtgaactga

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