Lepidochelys kempii (Atlantic ridley): 140912319
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Entry
140912319 CDS
T11378
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140912319 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140912319 (DIS3)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
140912319 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
DUF4611
Dis3l2_C_term
YhfM
zf-dskA_traR
Motif
Other DBs
NCBI-GeneID:
140912319
NCBI-ProteinID:
XP_073202641
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All DBs
Position
1:complement(77123092..77155970)
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AA seq
959 aa
AA seq
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MLTSRTFLKRTRAGAVMKVVREHYLREDIACGAAACEQCGQQPGEPRLEAQPGGAASSLC
PAPHYLLPDTNVLLHQIDILEDPVITNVIVLQTVLQEVRKRSAPVYKRIRDVIASPEKHF
YSFTNEHHRETYIEQEQGETANDRNDKAIRVAAKWYDEHLKKINNEETIQVILLTNDRNN
KEKAVEEGLTAYTCEEYIKSLIANPDLVDRLACVSDEGKEIESGRIIFSEHLPLSKLQQG
IKSGIYFQGTFRANRDNYLEATVWIHGDTEENKEIIIQGLKNLNRAVHEDLVAVELLAKD
QWVAPSSVVLQDEGQNEDDDENEEEKENTLKSSVSKNMLRPSGRVVGIIKRNWRPFCGML
SKSQIKEARRHLFTPADRRIPRIRIETRQSSALEGQRIIVAIDGWPRNSRYPNGHFVKNL
GTAGDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKFREDLRYLCVCSVDP
PGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMV
PELLSSNLCSLRSNVDRFAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRIDSS
SMKDDITTSLRGLNKLAKILKKRRIDNGALTLSSPEVRFHIDSETHDPIDLQTKELKETN
SMVEEFMLLANISVAKKIHEEFSEYALLRKHPAPPPSNYDILVKAAKSKNLEIKTDSAKA
LADTLDKAESPDFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIR
RYADIIVHRLLAVAIQADSTYPELTDKHKLADLCKNLNYRHKMAQYAQRASVAFHTQLFF
KNKGVVNEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPKPNINYNDEVPSLTVEKTT
FYTFDKVKVNIMLDASNIQHQKIRMALVEPKILGSDVPNQTTELSTNSEPEKKKKKLKK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgttgacctcgcgcacgttcctgaagcggacgcgggcgggtgcggtgatgaaagtggtg
cgcgagcactacctgcgcgaggacatcgcgtgcggggcggccgcctgtgagcagtgcggg
cagcagcccggggagccccgcctcgaggcccagcccggcggtgccgccagcagcctctgc
cccgccccgcactacttgctgccggacaccaacgtcctgctgcaccagattgatatactt
gaagatcctgttattacaaatgtaattgtgcttcagacagttttacaagaagtgaggaaa
cggagtgcaccagtgtacaagcgaattagagatgtgattgccagtcctgaaaaacatttc
tattccttcactaatgaacatcatcgagaaacttatatagaacaagagcaaggagaaact
gctaatgaccgcaacgataaagccatccgagtagcagcaaaatggtatgatgaacacttg
aagaaaataaacaatgaggagaccatccaagttattttactaacaaatgacagaaataat
aaagagaaggctgtggaagaggggttaactgcttatacatgtgaagagtatataaagagc
ttgatagctaatcctgatcttgtagatcggcttgcttgtgtatctgatgaagggaaagaa
atagaaagtggaaggataattttttcagagcatcttccccttagcaaattacagcaaggc
ataaaatctggaatctactttcaaggaaccttcagagccaacagagataattatcttgaa
gctacagtatggattcatggagatactgaagagaacaaagaaataattatacaagggctt
aaaaatttaaaccgagcagttcatgaagatctagtagctgtggaactgttggcaaaagac
cagtgggttgcaccatcctctgtggttttgcaagatgagggtcaaaatgaagatgatgat
gaaaacgaagaagaaaaagaaaatactctaaagtcatctgtaagcaagaatatgttgaga
ccatcaggaagagtagtaggtattataaaaagaaattggagaccattttgtggcatgctt
tccaaatcacagataaaagaggccagacggcatttgtttacaccggctgatcgcagaatc
cctcgaattcgaatagaaaccagacaatcttctgcattagagggacaaagaattattgtt
gctattgatggttggcccagaaattccagatatcctaatggtcactttgtaaagaattta
ggaactgctggagataaagagactgagacagaagttctgcttcttgaacatgatgttccc
catcaggctttctcccaggctgttcttagcttcttaccaaaaatgccatggagcattaca
gaagaggacatgaaatttagagaagacttgagatatctgtgtgtttgtagtgtggatcct
ccaggctgtactgatattgatgatgcattacattgcagagaactggaaaatggaaatcta
gaggttggtgtacatattgcagacgtcagccattttattcgaccaggaaatgctttggac
caagagtcagcaaaaagagggacaactgtatatctatgtgaaaaaaggattgatatggtt
ccagagttgcttagctccaatttatgctccttgagatctaacgtggacaggtttgcattt
tcatgtatatgggaaatgaaccacaatgctgaaattttaaaaaccagatttaccaagagt
gttattaattccaaggcatcccttacatacgcggaggcacagatgagaattgattcctca
agcatgaaagatgatattactactagtttgcgtggactaaataaattagcaaaaattctg
aagaagagaagaattgataatggggctttaacactttcctcacccgaagttcgtttccat
atagatagtgaaactcatgatcctattgatttgcagaccaaagagcttaaagaaactaat
tccatggttgaagagtttatgttgcttgccaatatctccgtagcaaaaaaaattcatgag
gaattctcagaatatgccttgctccggaaacacccggctcctcctccatcaaattatgac
atccttgtgaaggcagcaaagtccaagaatttggaaattaagactgattcagcaaaggct
ctagctgacactttagacaaagctgaatctcctgatttcccgtatctaaatacactgttg
cgaatcttggccactcgctgcatgatgcaagctgtctacttttgctctggaatggataat
gattttcatcactatggcttagcatcacctatttatacacattttacttcacccatcaga
aggtacgctgatataatagtacatcgactattggcagtggctatacaggcagacagtact
tatccagaacttacagataaacataaactagcagacctgtgtaaaaatctcaactacaga
cataaaatggctcagtatgcacaaagagcatcagttgcgttccatacccagttgttcttc
aaaaacaaaggagtagtgaatgaggaggcgtatattttatttgtaagaaagaatgcaatt
gtggttctaattcccaaatatggtttagaaggaacagtcttctttgaagaaaaagacaaa
ccaaagccaaatatcaattacaatgatgaggtaccctcgcttacagtagagaaaacaaca
ttttatacgtttgacaaggttaaagtaaacatcatgttagatgcttccaacatccaacac
cagaaaattcgtatggcgctggtagaacccaagatactgggaagtgatgttccaaatcag
actacagagctgagcactaacagtgaaccagagaaaaagaagaagaagctgaaaaaatag
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