Lepidochelys kempii (Atlantic ridley): 140912645
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Entry
140912645 CDS
T11378
Symbol
ABCC8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
140912645 (ABCC8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lkp02000
]
140912645 (ABCC8)
Transporters [BR:
lkp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
140912645 (ABCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_21
nSTAND1
RsgA_GTPase
AAA_23
AAA_25
TMD0_ABC
AAA_16
DEAD
Motif
Other DBs
NCBI-GeneID:
140912645
NCBI-ProteinID:
XP_073203472
LinkDB
All DBs
Position
6:31080735..31216068
Genome browser
AA seq
1654 aa
AA seq
DB search
MRPRPVPCAPRPGSSTMSLAFCGDENNSAAYNVDKGVLNNGCFVDALNVVPHVFLLFITF
PILFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVSESRHL
HLYMPAGMAFLAAITSVVYYHNIETSNFPKLLIALLFYWTLAFITKTIKFVKFCDNGVGF
SQLRFCLTGLLVILYGMLLAVEINVIRVRRYVFFKTPKEVKPPEDLQDLGVRFLQPFVNL
LSKGTYWWMNTFIKTAHKKPIDLKAIGKLPIAMRALTNYIRLNEAFEAQKNKRSPYPQGS
KSIWCALCCAFGRPLVLSSTFRILADLLGFAGPLCISGIVHHVGKGNNTIRPQIKILGVF
FISSQEFLANAYVLAVLLFFALLLQRTILQASYYVAIETGINLRGAIQTKIYNKIMQLST
SNMSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVLLLNYLLGISALIGA
VVIIVLAPVQYFVATKLSQAQRSTLEYSNERLKKTNEMLRGIKLLKLYAWEHIFHSSVEE
TRQKEMTSLKAFALYTSVSIFMNAAIPIAAVLITFVVHAHLTGNADFSPSVAFASLSLFH
ILVTPLFLLSSVVRSTVKALVSVQKLSEFLSSEEIGEEQDKCSESRNADNHSKYQVVPLR
VVNRKRPAREDWNNYSSHMRRPVNITEGDDFCVKITNGFFTWTPEGSAALSNIDIRIPQG
QLTMIVGQVGCGKSSLLLATLGEMQKTSGNVFWNSSIPDSETGEDVSVYPLLTRMSSWLS
EALTTLLLLLLDPHAPPLLICLFLKFVPQPIRLSTFDCAYFPPNPEKETAVDMEVRKRGS
VAYASQKPWLLNATVEENITFESPFNKQRYKAVIDACSLQPDIDILPHGDQTQIGERGIN
LSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMQEGILKMLREDKRTIILVTH
KLQYLPHADWIIAMKDGTIQREGTLKDIQKSESELFEHWKTLMNRQDQELEKETIIERKT
VLERKNLRRTRYSREALLKDDEEDEEEITESDDDDDNLSSVLHQRAKMPWRACGKYLSSA
GILLLPLLILSQFLKHTVMVAIDYWLAKWTSDVISAKSDLEQKNCSVCQEFNHSRYSRMF
SILCCLGIILCLVTSIAVEWTGLKVAKKLHYCLLNKIILAPMRFFETTPLGSILNRFSAD
CNTIDQHIPATLECLSRSTLLCVSALAVISYVTPMFLIALLPLAIICYFIQKYFRVASRD
LQQLDDSTQLPLLCHFSETMEGLTTIRAFRYEGRFRQKLLEYTDSNNIASLFLTAANRWL
EVRMEYIGACVVLIAAVTSITNSLYNQLSSGLVGLGLTYALMVSNYLNWMVRNLADMEIQ
LGAVKRINGLLKTEAENYEGLLSPSQIPQNWPDRGEIQIQNLSVRYDSNLKPVLKHVSAH
ISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDGIDIAKLPLQTLRSRLSIILQD
PILFSGTIRFNLDPEKKCTDSMLWEALEIAQLKHVVKALPGGLDAIVTEGGENFSQGQRQ
LFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILNADL
VIVMKRGVILEYDKPEVLLEQEESVFASFVQADK
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccccgccccgttccctgcgcgccgcgtcccggctcctccaccatgtccttggcg
ttctgcggcgatgagaataactcggctgcctacaacgtggacaaaggggtgctcaacaac
ggctgctttgtggacgcgctcaacgtggtgccgcacgtcttcctgctcttcatcaccttc
ccgatcctcttcataggatggggaagtcagagttccaaagttcatatacatcatagcact
tggcttcattttcccggccacaatttacgttggatcttgactttcatccttttgtttgtg
ctggtgtgtgaaatagcagagggcatagtgtcagatggggtctcagaatcccgtcatttg
cacctgtacatgccagctggtatggcattcttggcagccatcacatctgttgtttactat
cataacatcgaaacatcaaattttccaaagttattaatagccttgctgttctactggacc
ttagcttttataaccaaaactatcaaatttgtgaagttctgtgataatggggttggattt
tctcagcttcgattttgcctcacgggacttctggttattctatatggaatgctactagct
gtagaaattaatgtcatcagggtgaggagatatgttttcttcaaaacccccaaagaggtt
aagccccccgaggatcttcaggatcttggagttcggttcctacagccctttgtgaatctg
ctgtccaaaggaacatactggtggatgaatactttcatcaagaccgcccataaaaagcca
atagacttgaaagccataggcaagctgcctattgccatgagagctctgacaaattacatt
cgccttaatgaggcttttgaagcacaaaagaacaaaaggtctccatatccacaaggatcc
aaatcaatttggtgtgctctctgctgtgcttttgggagaccactagttctcagcagcact
ttccgtattctggctgacttgcttgggtttgctggtcccctctgtatctctgggattgtt
caccacgttggaaaaggaaataacaccatccgtccacagattaaaattcttggtgttttc
tttatttcgtctcaagagttcctggccaatgcttatgttttggctgtcctcctatttttt
gcccttctattgcaaaggacaattctccaggcatcatactatgtcgccattgaaactgga
attaacttgagaggagcaattcagacaaaaatatacaataagattatgcaactgtccact
tccaacatgtctatgggggaaatgactgcaggacagatctgtaacctggttgccatagat
acaaaccaactgatgtggttcttcttcctctgccctaacctttgggctatgcctgtgcag
attattgtaggcgtgcttctgctcaactacttgcttggaatcagtgccttaattggagca
gtagtgattatagtgcttgcacctgtccagtactttgtggcaacaaaactctcacaggcc
caaagaagcacattagaatattccaatgagagactgaagaaaacaaatgagatgcttcgg
ggcattaaactccttaaactctatgcgtgggaacacatctttcacagcagtgtggaggaa
acccggcaaaaggaaatgactagccttaaggcctttgctctctatacctccgtatcaatt
ttcatgaatgcagcaataccaattgcagctgtacttataacatttgtggtccatgcccac
ttgactggaaatgctgacttctctccatcagtggcctttgcctcactctccctctttcac
attcttgtcaccccactgttcctgctctccagtgtggtcagatctactgtcaaagctctg
gtcagtgtgcagaaactgagtgaatttttatcaagtgaagaaattggagaagagcaagat
aaatgttcagagtcaagaaatgcagacaaccacagcaaataccaggtggttcccctcaga
gttgttaaccgcaagaggcctgcgagagaagactggaacaattacagctctcacatgaga
agacctgttaacatcacagaaggagatgatttttgtgtaaagatcacaaatggatttttc
acctggacaccagaaggatctgcagcattgtccaacattgatatccgaatccctcaaggt
cagttaacaatgatcgtaggacaggtgggctgtggtaagtcttcactcttgcttgcgaca
cttggggagatgcagaagacttccgggaacgtattctggaacagcagtattcctgacagc
gagacaggggaagatgtcagtgtatatcccctgctgaccagaatgtcttcctggctctct
gaagcattaactactctactgctgttacttttggatcctcatgctcctccactactgatt
tgcttgtttctcaagtttgtcccccaacccatcagattgagtacctttgactgtgcttat
ttcccacctaacccagagaaggaaaccgctgttgacatggaagtcaggaaaagaggatca
gtggcatatgcctcacagaaaccatggttgctcaatgctactgtggaagagaatatcact
tttgaaagccccttcaacaaacaaaggtacaaagcagtaattgatgcttgctcccttcag
cctgatattgacattcttcctcatggagaccaaactcagattggagagaggggtattaat
ctttctggagggcagcgccagcgcatcagtgtggcaagagcactttaccagcagacaaat
gttgtgttcctggatgatccgttttctgcactggatatccacttaagtgaccatcttatg
caggaagggatccttaaaatgctaagggaagacaagaggaccattatcctggtcactcac
aaactacagtacctgccacatgctgactggatcattgcaatgaaggatggtaccattcaa
agagaggggacactcaaggacattcagaaatcagagtctgagctctttgaacactggaaa
acactcatgaatcgacaggaccaagaactggagaaggaaactataattgaaagaaaaact
gttttggagaggaagaacctccggaggaccaggtattcccgagaagctctgctaaaagat
gatgaagaggatgaagaagaaataacagaaagtgatgatgatgacgacaacctatcttct
gtgctacatcagagagcaaagatgccttggcgagcctgtgggaagtacctcagctcggca
gggattctgctgttgcctttactgatcctttcacagttcttgaaacacactgttatggtg
gctattgactactggcttgcaaagtggacatctgatgtaatttctgcaaagagtgaccta
gaacaaaagaattgttctgtatgccaggaatttaatcattctcgctattcaaggatgttc
agcattctctgctgccttgggattatactgtgtcttgtcacgtcaatagcagtggagtgg
actggtctaaaagttgccaaaaaactacactattgtctgctgaataaaattattttggca
ccaatgagattttttgaaacaacaccactgggaagcatcttgaacagattttcagctgat
tgcaacaccatcgaccagcacattcctgctaccctggagtgcctgagccgctccactttg
ctatgtgtatctgctcttgctgtaatctcctacgtcacgccaatgtttctcattgccctg
cttcctcttgctatcatatgttatttcatccagaaatactttcgagtggcctcaagggac
ctgcaacagttggatgacagcacccagctgccattactttgccatttttcagagactatg
gagggtttaaccactatacgagctttcaggtatgaaggccggttccgacaaaagcttctt
gaatatacagattccaacaatattgcttcccttttccttacagctgccaatcgttggctg
gaagtccgcatggaatacattggagcatgtgtggttctcatagcagctgtgacttctatt
accaattccttgtacaatcagctctcttcaggacttgtgggtttaggactaacctatgct
cttatggtgtctaattacctgaactggatggttcgtaacctggctgatatggagatccag
ctgggagcagtgaaaaggatcaatggccttctaaaaacagaagctgaaaattatgaaggg
ctcctttctccttcacagattcctcagaactggcctgacagaggtgagatccaaatacag
aacctgagtgtccggtatgacagcaacctaaagccagtcctaaagcacgtcagtgctcac
atctctccagggcaaaagattggaatctgtggcagaactggcagtgggaaatcctccttc
tctctcgcctttttcagaatggttgacacctttgaagggaggattatcattgatggcata
gacattgcaaagctccctttacagacgctaagatccaggctgtccatcattctccaagat
cctattttgttcagcggtacaatccggtttaacttggacccagaaaagaaatgcacagac
agcatgctgtgggaagccttggagatagcacaactcaaacatgtggtgaaagcactacca
gggggtctagatgccatagtcacagaaggtggagaaaattttagccaggggcaaaggcag
ctgttctgcttagcacgggcatttgtgcggaagacaagtatcttcatcatggatgaagcc
acagcatctattgacatggcaacggagaacattcttcagaaggttgtaatgacggcgttt
gctgaccgtactgtggtaaccatagcacacagggtacacactattctgaatgcagattta
gtcattgtaatgaagagaggggttattttggagtatgataagcctgaggttctgctggag
caagaagagagtgtgtttgcttcttttgtacaagctgataaataa
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