Lepidochelys kempii (Atlantic ridley): 140912713
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Entry
140912713 CDS
T11378
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140912713 (BMAL1)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140912713 (BMAL1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
bHLH_INO4
bHLH_SAC51
PAS_8
PLU-1
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
140912713
NCBI-ProteinID:
XP_073203741
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Position
6:39125745..39210771
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AA seq
648 aa
AA seq
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MADQRMDISSTISDFMSPGPTNLISSSLSTSGMDCNRKRKGSSTDYQLDGFSFEEGMDTD
KEDQHGRLEYTDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLREKKEKTRREGEENTNGATNPYTEANYKPAFLSDDELKHLILRAADGF
LFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRER
LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS
FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPVNGEIRVKPT
EYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK
ITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSTSVLDGGDAAFPQLAA
SPHSMDSVLQAGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCG
SSPLNITSTPPPDTSSPGGKKILNGGTPDIPAAGLLSGQIQDNSGYPYSDNSSILGENSH
IGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaaggatggacatctcttctacaattagtgattttatgtcaccaggaccc
accaacctaatctccagttcccttagcacttcaggaatggattgcaataggaaaaggaaa
ggaagttctactgattatcaacttgatggattttcctttgaagaaggtatggatacagat
aaagaagaccagcacggaaggttggaatatacagaccaacaaggcagaataaaaaatgca
agagaggctcatagccagattgaaaaaagacgtcgagataaaatgaacagttttattgat
gaattggcatctttggtaccaacgtgcaatgctatgtcccgaaagctagataaacttact
gtactgagaatggctgttcagcatatgaaaacattacgagaaaagaaagaaaagactagg
agagagggagaagaaaacacaaatggtgccacaaacccatatacagaagcaaactacaaa
cctgcttttctctcagatgatgaattaaaacatcttattctcagggcagcagatggattt
ctgtttgttgtgggctgtgatagagggaagatactgtttgtttcagaatctgtcttcaag
atcctcaactacagtcagaatgatctgattggtcagagtttgtttgactaccttcatcct
aaggatattgcaaaagttaaagagcagctctcttcttctgatactgcaccacgagaaagg
ctcatagatgcaaaaactggacttccagttaaaacggatataacacctgggccatcacga
ctttgttctggagcaagacgttccttcttttgtaggatgaaatgcaacagaccttcagtg
aaagtagaagataaggattttccttccacctgctcaaagaagaaagcagaccgcaaaagc
ttttgcacaattcatagcacaggatatttaaaaagctggccaccaacaaaaatgggacta
gatgaagataatgagccagataatgaaggctgtaacttaagctgtcttgttgcaattgga
cggttacatccccatgtagttcctcaaccagtcaatggcgagatccgggttaaacctaca
gaatatgtctctcgacatgcaatagatgggaagtttgtttttgtagaccagagggcaaca
gccattctggcatatttaccacaggaacttctaggcacttcatgttatgaatattttcat
caagatgatataggacatcttgcagaatgtcacagacaagttttacagacaagagaaaaa
attacaactaattgttacaagtttaaaataaaagatggctcttttattaccttgaggagt
cgctggttcagtttcatgaacccttggaccaaagaagtagaatacatcgtctcaacaaat
acagttgtttccaccagtgtacttgatggtggagatgcagcctttccgcagcttgcagct
tctccgcacagcatggacagcgtacttcaggctggagaaggtggcccaaaaaggacccat
cctacagttcctggtattccaggtggaacaagagctggggcaggtaaaataggtagaatg
attgctgaggaaatcatggagatccataggataagagggtcatcaccttccagctgtggt
tccagtccattgaacattaccagcacaccaccccctgatacatcttctccaggaggcaaa
aagattttgaatggtggaactccagacattcccgctgctggtttactatctgggcagatc
caggataattctggctatccatattccgacaactcctccattcttggggagaactctcac
ataggcatagatatgatagacaacgaccaaggatcaagcagccccagcaacgacgaagct
gcaatggcagttataatgagccttttggaagcagatgcaggcctcggaggccctgtggat
ttcagcgacttaccgtggcccttgtaa
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