Lepidochelys kempii (Atlantic ridley): 140912806
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Entry
140912806 CDS
T11378
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
lkp Lepidochelys kempii (Atlantic ridley)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
140912806
NCBI-ProteinID:
XP_073203991
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Position
6:complement(50904407..51517822)
Genome browser
AA seq
1835 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDYSAESESDSSKEETIYDTIRATSEKPSSRMEDSRSNTLVIRI
IIPDLQQTKCIRFNPEASVWVAKQRILCTLNQSLKDVLNYGLFQPASNGRDGKFLDEERL
LREYPQPVNKGVPSLEFRYKKRVYKQLNLDEKQLAKLHTKANLRKFMDHVHHLSVEKITK
MLDRGLDPNYHDLESGETPLTLAAQHDNTVEVIKTLKNGGAHLDFRAKDGMTALHKAARA
KNQVTLKTLLELGASPNYKDSCGLTPLYHTAVVGGDPYCCELLLHEHATVSCKDENGWQE
IHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLLFRGANKELKN
YNSQSSFQVAIIAGNFELAEYIKNHKETDIVPFREAPTYSNRRRRPQSTLAAPRVLLRSN
SDNNLNINNIPECSASSSASSHRSLSPHLLQQMQNNPNGTVKAVGSYTPSSRSRSPSLNR
VGEDAKRQQHRHISAGYNPSANKDAIAALDYQGPKRKLYSAVPGRLFIVVKPYQPQGEGE
IHLHKGDRIKVLSIGEGGFWEGSTRGLVGWFPADCVEEVQCKPNESKPETRTDRTKKLFR
HYTVGSYDSFDALSDCIIEEKAVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQY
LESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRNLD
PDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELASVRKKKDKVDEIVPVSKPSRITDN
VTVDSRVATIKPRPSSRCFPSATDINSMYDRQGIAVMPPTVPGTPQGLFLGIPRGTMRRQ
KSIGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSLPPSPPPPSPSLYNSPKSPTS
RSYGTIKPAFNQNSGSKVSSGRSEHMGTIMRDKGMYYRRELDRYSLDSEDLYSRNAALQA
NFRNKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCSIPIPTII
VKEPSTSSSGKSSQGSSMEIDPQSSEQPGQLRPDDNLNVSSPFAAAIAGAVRDREKRLEA
RRNSPAFLSTDLGDEDVGLLPPIPRMRQSKFTDEDTFSNEDSFRQVMSPSPVPAPRESEN
LFNSSEPSNESDERTLNSSSIKKVTENDMVATQTVNVSSSDNYVHPLTGKLLDPNSPLAL
ALSARDRAMKEQTQQTPGKGETGKADLNKPLYIDTKLRSNIETTFPVTAAVTRQNTRGPL
RRQETENKYETDMGKEKKPEEKKNMLINIMDTSQQKSAGLLMVHTVDAAKSDDTLEDKRV
EMEMNPDNFPSEMPEDSEEAESGLNVSATPEPPASPCKTIVAASSVDDPVILPFRIPPPP
LASIDIDEEFIFTEPLPPPLEFANSFDIPDDRLAPGSALTDLLKQRKNGTPTSASFNPNQ
STNSLDSKKQVGLSNCLPASFLPPPESFDHVTDSGIEEVDSRSSSDHHLETTSTISTVSS
ISTLSSEGGENLDTCTVYADGQTFLVDKPPVPPKPKMKPIINKSNALYKDALIEETVDSF
VIPPPAPPPPPISAQPSTAKVLQQRTSKLWGDVTEVKSPILSGPKANVISELNSILQQMN
REKSSKPGEGLESPSGTKTASLSTRSTEVMSTVSGTRSTTITFTVRPGPSQPITLQSRSP
DYDSRTSGVRHAPSPVVSPTEINKDIMPAPLTPAASASSPSPTLSDVFSLPSQPPSGDLF
GLNTGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKETFMDNEIDG
THLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcagtccaacatcaagtgaagatgagatggcacaaagcttttcagattattct
gctgaatctgaatcagacagctccaaagaagaaactatttatgatactatcagggctaca
tcagagaaaccaagcagcagaatggaagacagtaggagcaacacattagtgatacgaatt
ataatacctgacctacagcaaacgaaatgcattagatttaatcctgaagcttcagtgtgg
gtagcaaaacaacgaattttatgcactttgaatcagagtttgaaagatgtcctgaattat
gggctgtttcagcctgccagcaacgggagagatgggaaatttttggacgaggaacgactc
cttagggaatatccacaaccagtgaataaaggtgttccctccttagagtttcggtacaag
aagagagtgtataagcaattaaatcttgatgaaaaacagctggccaagcttcatacaaag
gctaatttgagaaaatttatggatcatgttcatcatctctcagtggaaaaaatcacaaag
atgttggatcggggactggaccccaactaccatgacctagagagtggagaaactcctcta
actttggcagctcagcatgataatactgtagaagtgattaaaactctgaaaaatggaggg
gcacatttagatttcagagcgaaagatggaatgacagctctgcacaaagcagctagagcc
aagaaccaagtaaccctcaagacccttttagagcttggagcatctcctaactacaaggac
agctgtggattgacaccactataccacaccgcggtagtaggaggagacccttattgttgt
gaacttttacttcatgaacatgctacagtcagctgcaaagacgaaaatggatggcaagag
attcatcaggcttgccgatatggacatgtccagcatttagaacacttacttttttatgga
gcagatatgggagcacagaatgcctcaggaaatacagcattgcatatttgtgctctttat
aaccaggacagctgtgcaagagttctgttgttccgaggagccaacaaggagttaaagaat
tataacagccaatcttcgtttcaggtggccataatagcaggaaattttgagctggctgaa
tatatcaaaaatcacaaggaaacagatattgtgccatttagagaggctcctacctattca
aacaggaggcggaggccccaaagcaccttggcagcacctcgtgtcttacttcgttccaac
agcgataacaatctgaacatcaacaacattcctgagtgttcagcttcatcttctgcttct
tcacaccgcagcctttcacctcacctacttcaacagatgcagaataatcctaatggaact
gtaaaagctgttgggagttataccccatcctctcggagtcggtcaccatcattaaacagg
gtaggagaggatgcaaaaagacagcaacataggcacatcagtgccggttataatcccagt
gccaacaaggatgctatcgctgccttggattatcagggtccaaaacgcaaactttacagt
gctgtacctggaagactttttattgtcgtcaagccatatcaacctcaaggagaaggagag
attcatctgcacaaaggggataggataaaagttttaagcattggtgaaggtggattctgg
gaaggcagcacccgaggacttgttggatggtttcccgcagactgtgttgaggaagtgcag
tgtaaaccaaacgaaagcaaaccagaaactcgaacggatagaacaaagaaattgtttaga
cactacacagttggatcatatgacagctttgatgctttaagtgactgcattatagaagaa
aaggcagtggtcctgcagaaaaaagacaatgaaggatttggatttgtgctcagaggggca
aaagctgatacacctattgaagagttcaccccaactccagcctttcctgctttgcagtac
ctggaatctgtggatgaagggggagtagcatggcaagctggcttgagaactggagacttc
ctgattgaggttaacaatgaaaatgtagtgaaagttggccacaggcaggtggtgaacatg
attcgacaagggggtaatcatctagttcttaaggttgtcacagtaaccagaaatcttgat
ccagatgatacagctagaaagaaagccccaccacctccaaagcgagctccaaccactgcg
ttgaccttgcggtctaagtcaatgacctcagagcttgaagagcttgcttcagtacggaag
aagaaggataaagtggatgaaattgtaccagtttccaagccatcaagaattacagacaat
gtaactgtggactcaagagtggcaacgattaaaccgcggccttccagtagatgctttcct
tcagctacagatataaattccatgtacgatagacagggtattgctgtgatgccacctact
gtacctgggactcctcaaggtctttttctaggtatacctcggggtacaatgagaagacaa
aaatctataggaataacagaggaagaacgtcaatttttggctcctcctatgttgaaattt
accagaagtctgtccatgccagacacttctgaagatatcccccctccaccacagtctcta
cccccttcaccaccacctccttctccctccctttataactctcccaaatctccaacatca
agaagctatggaacaataaaacctgcatttaatcagaattcaggttcaaaggtttcttca
ggtagatctgaacatatgggaacaataatgagggacaaagggatgtattacagaagagaa
ctggaccgttattctctagattctgaggacttgtatagtaggaatgctgcgttgcaggca
aacttcagaaacaagaggggtcagatgccagaaaacccatattctgaagttgggaaaata
gcaagcaaagcagtttacgtgccagccaaaccagcaaggcggaagggaatgctagtgaaa
cagtctaatgttgaggatagtccagaaaagacctgttctattccaattccaacaattatt
gtgaaagaaccatctaccagcagtagtgggaaaagtagccaaggaagcagtatggagatt
gaccctcagtcttcagagcagcctggacagctcagacctgatgataatttaaacgtcagt
agtccatttgcagcggccattgctggagcagtgagggacagggaaaagagattagaagct
aggcgtaattctccagctttcctttctacagatttgggagatgaggatgttggcctgttg
cccccaataccacgtatgaggcaatctaaatttactgatgaggacacgtttagtaatgaa
gatagttttaggcaagttatgtcaccttctccggttcctgcacctagagaatctgaaaat
ctttttaatagcagtgaacctagcaatgaaagtgatgaaaggacattaaactcttcatcc
ataaaaaaagttactgaaaacgatatggttgcaactcagaccgttaatgtgtccagttcg
gataattatgttcatccactcacaggaaagctattagatccaaactcacctctagcactc
gcgctgtctgcaagagatagagccatgaaagaacaaacgcaacaaactccaggcaaagga
gaaactggtaaagcagaccttaataaaccactttatattgatacaaagctgagatctaat
attgaaacaacatttcctgtgactgctgctgttaccaggcaaaatacacgtggcccactg
agaaggcaggagactgaaaacaaatatgaaacagatatggggaaagagaagaagcctgaa
gaaaagaaaaacatgctgataaatattatggatacttcacagcagaagtcagctggttta
ctaatggttcatactgtggatgcagcaaagtctgatgacacccttgaagataagagagtt
gaaatggaaatgaatccagacaattttccatcggagatgccagaagatagtgaagaagca
gaaagtgggttgaatgtatctgctacacctgagccacctgcatctccctgcaaaactatt
gttgcagctagctctgttgatgaccctgtcattttgccatttcgcatccctccaccccct
ttagcatctattgatattgatgaagaatttatttttactgagccgttacctcctccctta
gaatttgctaacagttttgatatccccgatgaccgtttagctccaggttctgctctaacg
gacttacttaagcaaagaaaaaatggaacacctacatctgcttcatttaaccccaaccaa
tccacgaattctttagacagtaaaaaacaagtgggtctttcaaactgtttgcctgcctca
tttctgccaccccctgaaagttttgatcatgtcactgactctgggattgaggaggtagac
agtcgatctagtagtgaccatcacttagagacaaccagcactatctcaacagtgtccagc
atctctaccttatcctctgaaggtggtgagaacttggatacctgtacagtctatgcagat
gggcaaacgtttctggtggacaaacccccagtacctcctaagccaaaaatgaagcccata
atcaacaaaagcaatgcactttacaaagatgctctaattgaagaaactgtagatagcttt
gttatccctccacctgctccacccccacctcctatcagtgcacagcccagtacagctaaa
gttttacagcaaaggacctccaagctatggggtgatgtaactgaggtaaaaagcccaatt
ctctcaggcccaaaggctaatgttattagtgaattgaactcaatactacaacaaatgaac
agagagaaatcctcaaagccaggggaagggttggagtcgccttctggaacaaaaactgca
agtctcagtacaaggagcacagaagtaatgagcactgtctcaggtacacgaagtacaacc
atcacttttacagtccggcctggacccagccagcccatcacattgcagagcaggtcccca
gactatgacagtaggacatcaggagtgagacatgctccaagccctgtggtttcaccaaca
gagattaacaaagacatcatgcctgctcctctgacacctgctgcttcagcttcatctcct
tctccaactctctctgatgtatttagcctacccagccagcctccttctggggacttattt
ggcttgaacacaggtcgcagcaggtctccttctccctcaatattgcaacagccaatctca
aataagccttttacaactaagcctgtccacctgtggactaaaccagatgtggcagattgg
ttggaaagtctaaacttaggtgaacataaagagaccttcatggacaatgaaatagatggc
acccatttaccaaaccttcagaaggaagacttgatagaccttggagtgactagagttggg
cacagaatgaatatagaaagagctttgaaacagctactggacagataa
DBGET
integrated database retrieval system