Lepidochelys kempii (Atlantic ridley): 140913179
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Entry
140913179 CDS
T11378
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03013
Nucleocytoplasmic transport
lkp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140913179 (PNN)
03015 mRNA surveillance pathway
140913179 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140913179 (PNN)
03041 Spliceosome [BR:
lkp03041
]
140913179 (PNN)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140913179 (PNN)
Spliceosome [BR:
lkp03041
]
Complex C
Other components
EJC/TREX
140913179 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
140913179
NCBI-ProteinID:
XP_073205203
LinkDB
All DBs
Position
6
AA seq
693 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPAQGRLLTITGPGGGRGRGSIL
LRRGFSDSGGPPAKQRDLEGATSRLGGERRTRRESRHESDAEDEDVKKPALQSSVVATSK
ERTRRDLIQDQTMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQA
EEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTRTRPHL
FYIPGRMCPATQKLIDDSQKKMNAIFENRRNEFAEQINKMEARPRRQSVKEKEQQEVHNE
EKKEEQNKEQEEGKVAQQVEEMETGNQNNDIEMEEAGEEKVKIGAGHSDAEREQEEEEEQ
KHEIEDKVEERGEVKENDRQQDSQHEEVMAVREEGESSQPVDNEQHMMEMNEADSVEPLE
SENSKEVAPEAECEAQPAKELNADSPEKETANKPEIEAEPEEKQEKEPQAQPEPEAEIQP
QPESVPLPQPPPLSQSIQDQEPRADQEEIAAVSVKLGELQSDQIQATSVEIKSKTRSRSR
GRTRNKTSKSRSRSSSTSTSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSS
SSTSSSESRSRSRGRGHNRDRKHRRSLDRKRRDASGLDRSHKSSKGSSRDTKGSKDKSSR
SDRKRSVSENSRSGKRTSRSERDRKSDRKDKRR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaggccaaggagagcctcaag
cacgtggatgagaatatccgtaaactcacgggccgggaccccaacgatgtgaggcccgct
caaggtagattattgaccatcacaggccctggtggaggtagagggcgtggtagcatattg
ctaaggcgtggattctcggatagtggaggacccccagccaaacagagggatcttgaaggg
gcaaccagtaggctgggtggggaacgtcggacaaggagagaatcacgccatgaaagcgac
gcagaggatgaagatgttaaaaagccggcgttgcaatcttctgttgttgctacctccaaa
gagcgaacacgtcgagacctaattcaggatcaaactatggatgagaagggaaaacaaagg
aatcgacgtatatttggcttgttgatgggcactcttcagaaatttaaacaagaatccaca
gttgctactgagaggcaaaagagacgtcaagaaattgaacaaaagcttgaagtgcaggca
gaggaggagagaaagcaggttgaaaatgagaggcgggaattgtttgaagaaaggcgtgct
aaacagacagaactgcgtctattggaacaaaaggttgaacttgctcaactgcaagaagaa
tggaatgaacataatgccaaaataattaaatatataagaaccaggacaaggccccatctc
ttctacatacctggcaggatgtgtcccgctacgcaaaagctaatagatgattcgcaaaaa
aaaatgaatgcaatatttgaaaatagacgcaatgagtttgcagaacaaattaacaaaatg
gaggccaggcccagaagacagtctgtaaaggaaaaagaacagcaggaggtgcataatgaa
gaaaagaaagaagagcagaacaaggagcaggaagagggtaaggtggctcagcaggtggaa
gagatggagacaggtaaccagaacaatgatatagaaatggaggaggcaggggaggaaaag
gtgaaaataggggcaggtcatagtgatgcagagagagaacaggaggaggaggaggagcag
aaacatgaaattgaggataaggtagaagagagaggtgaggtgaaggagaatgacaggcag
caggatagtcagcatgaagaggtcatggctgtaagagaggaaggtgagagttctcagcca
gtggataatgagcagcatatgatggagatgaatgaggctgatagtgtagaaccattagaa
agtgaaaatagcaaggaagtggcaccagaagctgagtgtgaagctcagccagccaaagag
cttaacgctgattctcctgaaaaggagacagctaacaaaccagaaattgaagctgaacct
gaagagaaacaggaaaaggagcctcaagcccagccagagcctgaggcagagatacagccc
cagccagagtctgtgccactgccacagcctccaccattgtctcagtccattcaagatcaa
gagcctcgggcagaccaggaggaaatcgctgcggtgtctgtaaagctgggtgagttgcaa
tctgatcagatccaggcgacgagcgtagaaattaagagtaaaactaggagtagaagcagg
ggtaggacaaggaacaagactagcaagagtcgaagtcgtagcagcagcactagtactagt
agtagtagctcaaccagcagtagcagcggcagcagttccagcagtggcagcagcagtagt
cggagtagttccagcagcagcagtagcacgagtggaagtagtagcagagacagtagcagc
agtagcactagcagcagtgagagcagaagtcgaagcagaggacggggtcataatagggat
agaaagcacaggaggagcttggataggaagcgaagggatgcttcaggactagacagaagt
cacaagtcttcgaaaggtagtagcagagatacaaaaggatcaaaggataaaagctcaagg
tctgacagaaagaggtctgtgtcagaaaatagtcggtcaggcaaaagaacttcacggagt
gaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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