Lepidochelys kempii (Atlantic ridley): 140913349
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Entry
140913349 CDS
T11378
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04136
Autophagy - other
lkp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140913349 (ATG2B)
04136 Autophagy - other
140913349 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140913349 (ATG2B)
03029 Mitochondrial biogenesis [BR:
lkp03029
]
140913349 (ATG2B)
Membrane trafficking [BR:
lkp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
140913349 (ATG2B)
Mitochondrial biogenesis [BR:
lkp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
140913349 (ATG2B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
140913349
NCBI-ProteinID:
XP_073205692
LinkDB
All DBs
Position
6:complement(107098509..107178312)
Genome browser
AA seq
2080 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLASGSEPMYWSSF
MTTSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFLDTVLRIEHVLE
NSKSGSALEIRIEKTMYCDETADECSGINVHQPTAFAHKLLQLSGVSLFWDEFPASAKSS
PVCSATQLAAEPKLSPSWNPKIVYEPHPQLTRNLPEVAPSDPVQISRLIGKMKLSLTLKQ
HEVLPGAKLDVDGQVDSIHLFLSPRQVHLLLDMLAAIAGPESPSRIELSNKDRKNRPMQQ
EDEYRIQMELKRYLRKESLSAGASSEQSFYETETARTPSSREEEVFFSMADMDMSHSLSS
LPPLGDPPTMDLDLSLTSTYTTTPAGSPLSATVLQPTWGDFHDPNKQEPPPPPPRSSSFT
PSIVHQTPLRRTSLPSRSVSVDESRPELLFRLALGTFSVSVLHIDPLPPPETSLNLNPLT
PMALDFFTRIEKIDPVKFSTEDFLSFREVFAEACSHDHLRFIGTGIKVSYEQRQRSAFRC
FSTDLSIGHMELLECLFSTDSCSIQPHYTELLTFHSEKGNDTHPLSCLQLHYKHSDNRGP
QGSQGRLSSVPQKAELQIKLSPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYTSYNK
HISLHKAFTEVFLDDSHTPANCRISVQVTSPALDLFVRFPIPDLRSDQERGPWFKKSLQK
EILHLEFTDMEFKTEFIGGSTPEQVKLELTFKELAGLFEEDKTESSIKFFQVSSGIDGDM
ISSDNFDWPRIVLKINPLAVHSILERIAAEEEEGDGNFQEEEEGGSHSLKDVCDLRRPEP
SPFSSRRVMFENEEMVMPGDAVEMTEFQDKAISNSHYVLELMLPNVHLTLPNKTFYEKLY
NRISNDLLLWEPTAPSPVETFENISYGVGLSVASQLINTFSKDSFSQFKSTIHYDDESGS
EEETLQYYSTVDPNYRSRRKKKLELQNKNTQSSLSVLLNVNHGLVSIFTDVKQDGGNILE
GKRGEFWFEFNSGSLFCVTKYEGFEDKHYICLHSSSLSLYHQGVVDGVVPPSEIRLPNTT
RPHWLEPTIYFSEEDGLSRTSSDGVGVDCLSMLSVAVKIQSHKSESNTKEFLVAVGLRGA
TLQHRVLPSGLSWHEQILYFLNISDEPVLGYNPPASITTFHIHLWSCALDYRPLFLPTRS
LLTVETFSISSNVALDKSSSTLRIILDEAALHLSDKCNTVTVNLQRDYIRVMDMGLLELT
ITAVKPGSDGERLKPRFELHSSSDVIHIRTCSDSCAALMNLIQYIASYGDLHPPSKTEIK
PGVVKRKTKADASSRPSSQGLVLAEAEQQILRDLMSDAMEEIEIHQAASPIGPQSNGILD
EKSQTQEPACSDLFLFPDESGNISQEPSPTYTSFTHHLIKEAMGDIPTENDDFCILFAPK
AVVSEKEEEPVVKIMVDDAILIKDNHFSLPVKKTDMSKAPLHFPIPLVRYVVKEISLVWH
LYGGKDFGTVPTSSPAKSFISPHSSPSHTPTRHGRSTTYGGRGRNPDFLMEIQLSKVKFQ
HEVYPPGGLECESSLLEQPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSN
MLTVKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTDVEVLMTPDP
EVKKSPGADVTCSLPKHVSSFKDPSPVISFSVHKQTSQNDSVDSVDMVNGEDHHFSHEEI
TSFSDQPVFFREFRFISEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLCYR
HGLLGVDKLFSYAIAEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKD
GRIVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPSCMETKKVKRFS
RHRLAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPA
VVKPLIVATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgccttggcctttctcagagtccatcaagaaaagggcctgcaggtacctgctgcagagg
tacctgggccacttcctgcaggagaagctcagtctggagcagctcagcctggatctgtac
cagggtaccggctctctggcgcaggtccctctggataaatggtgtcttaatgagattctg
gaatcagcagatgcacctctggaagtcactgaagggtttatccagtccatttctctgtct
gttccctgggggtcattgctacaggataactgtgcactagaagtgaaaggattagagatg
gtcttcaggccaaggcctcgtcttgcatctggttcagagcctatgtattggtcaagtttt
atgaccactagtatgcaacttgcaaaagaatgtcttagccaaaaactgacagatgaacag
ggagaagggtctcaaccttttgaagggcttgagaagtttgcagaaactattgaaacagtt
ctaagaagagtgaaagttacctttttagatactgttttgagaatcgaacatgtgctggaa
aattctaaaagtgggtctgcacttgaaatccgaattgagaaaactatgtactgtgatgaa
actgctgatgaatgctctggaattaatgtacatcagcccacagcttttgctcacaagtta
cttcagctctcaggtgtctctctcttctgggatgagtttccagcatcagcaaagtcctct
ccagtgtgttcagctacacagttggcagcggaaccaaagctttcccctagctggaaccca
aaaattgtgtatgagccacatccacagttaaccagaaacttgccagaagttgctccctct
gaccctgtgcagattagtaggctgattggtaaaatgaagttgagccttacattaaagcaa
catgaagtacttcctggagctaagttggatgtggatgggcaggtagactcaatacaccta
ttcctgtcaccgaggcaggtacatcttctattggacatgttagcagccattgctggacca
gagagccccagcaggatagaattatcaaataaagatagaaagaaccgacccatgcaacag
gaggacgagtatcggattcagatggagctgaagcgttacttaagaaaagaatctttgtca
gcaggagcatcatctgagcagagcttttatgagaccgagactgccagaacaccttctagc
cgtgaagaagaagttttcttctcaatggctgacatggacatgtctcacagtctctcctct
cttccacctcttggagacccaccaactatggatctagacctgtctttaactagtacatac
actactacaccagcaggatctccactgagtgctacagtgcttcagccaacttggggtgat
tttcatgaccctaataaacaagaaccaccacctccaccaccaagaagttcatcatttaca
cccagtattgttcaccaaactcctttaagaaggacttcccttccatccagatctgtttca
gtggatgaatccaggcctgaacttctttttagattggcactgggcactttctcagtatct
gtacttcacattgaccctctgccaccacctgaaacatcactgaaccttaacccactgaca
ccaatggcactggatttctttacccgaatagaaaagattgatccagttaagttttcaaca
gaagattttctgtccttccgagaagtatttgcagaggcttgttctcatgaccaccttaga
tttataggtactggcatcaaagtctcttatgaacaaagacaaaggtctgcttttcgatgc
ttcagcacagatttgtcgattgggcatatggaactactggaatgtcttttctctaccgac
tcctgctccattcaacctcactacacagagctgctaacatttcattctgaaaaaggaaat
gatacacatcctctttcatgccttcagctccattataagcactcagataacagaggacct
cagggtagtcaaggaagactgagctctgttccacagaaagcagaattgcaaatcaagcta
agtccagtattttgtgaactggatatcagtattgtggacagactaaattctttgcttcag
ccacagaaactaaccacagtggagatgatggcatctcacatgtacacatcttacaacaaa
cacattagtctgcataaagcttttaccgaagtttttctggatgattcacatacacctgca
aactgcagaatttctgtgcaagtcacttcaccagcattagatctttttgttcgcttccct
atacctgacctacgatcagatcaggaaagaggaccatggtttaaaaaatcacttcagaag
gaaatccttcatcttgaatttacagacatggaattcaagactgagtttataggaggttca
actccagaacaagttaaattagaacttacctttaaagagctagctggcttatttgaagaa
gataaaacagaatcttcaataaaattctttcaagtgtccagtggcatagatggagatatg
atatcatctgacaactttgattggccacggattgtactgaaaataaacccactggctgta
cactccattctggaaaggatagcagctgaagaagaagagggtgatggaaactttcaagag
gaagaggaaggaggatctcattctcttaaagatgtctgtgatcttagaagaccagagcct
tctcctttttcctctcgtagggtcatgtttgaaaatgaagagatggtgatgccaggtgat
gcagttgagatgaccgagtttcaggataaagcaatcagcaattctcattatgtactggaa
ctcatgttaccaaatgttcacttaacgctgccaaacaagaccttttacgagaaactttac
aataggatcagcaatgacttattattgtgggaacccacagctccatctcctgtagaaaca
tttgagaatatttcatatggtgttggactgtcagtcgccagccaactgatcaatactttc
agtaaagacagctttagtcaattcaaatctacaattcattatgatgatgagagtggatct
gaggaggaaactctacaatattattccacagttgatccaaactatcgttcacgccggaag
aaaaagcttgaattgcaaaacaagaacacacagagctctctctctgttcttctaaatgtt
aatcatggattagtgtcaatattcacagatgtaaagcaggatggtggaaatattctggaa
ggcaagcgtggtgaattctggtttgagttcaacagtggttcattattctgtgtgactaaa
tatgaaggttttgaagacaaacattacatctgtcttcattctagcagtctcagtttatat
catcaaggtgtggtggatggagttgtccctccatctgaaatacgactgcctaacacaacg
cgtccacactggttagaacctaccatttatttttccgaagaagatggtctcagtaggact
tcttcagatggtgtgggagtggactgtttaagtatgctgtctgttgcagtgaaaatccag
tcacataaatcggagagcaatacaaaggaatttctggttgctgttgggctgagaggagcc
actctccagcacagagtattgccttcaggtctaagctggcatgaacagattttatatttt
ttgaatatttctgatgagcctgttttgggatataatcctccagcttccattacaactttt
catatacacctctggagttgtgctcttgattacaggcctttgtttttgccaaccagatct
ctacttactgttgaaactttcagcatttccagtaatgttgcactggataagtcctcttct
actctcagaataatcttggatgaggctgctttgcatttgtccgacaagtgcaacactgtt
acagtgaatctgcagagagattatattcgtgttatggatatgggactcttggaactcacc
ataacagcagtaaaacctggttctgatggggagagacttaagccacgctttgagctacac
agttccagtgatgtaatccatatccgaacatgctcagattcttgtgctgcgctaatgaat
cttatacagtatattgcgagttatggcgatttgcatccacctagcaaaacagagattaaa
cctggagtcgtcaagcggaaaaccaaggcagatgcctctagccgaccatcttcccaagga
ctagtccttgctgaagcagaacaacagattttacgggatttgatgagtgatgctatggag
gaaattgagatccatcaagctgcttcccccattgggccacaatctaatggaatcttggat
gaaaagtctcaaacccaggaaccagcttgctcagatctcttcctgtttccagatgaaagt
gggaacatctcgcaagagccaagtcccacatacacttcattcactcaccatctgattaaa
gaggcgatgggagacatacctactgaaaatgacgacttctgtattctttttgcacccaaa
gctgttgtttctgagaaagaggaggagccagtagtgaaaataatggttgatgatgcaatc
ctgataaaagacaatcatttcagcctgcctgtaaaaaagacagatatgagcaaagccccc
ctacattttcctatccctttggttcgctatgttgtgaaggaaatctctcttgtttggcat
ctttatggaggaaaggattttgggactgtacctacttcttctccagctaaaagttttatt
agtcctcatagttctccttctcacacaccaacaagacatggacgtagtacgacatatggg
ggaagaggaaggaacccagacttcttaatggaaatacagttaagcaaggtgaaattccag
catgaggtataccctccaggagggctggaatgcgaatccagtctgttggagcagccagtg
tcccggcaggtttttattgttcaagaccttgagatcagagatcgcttggctacatcacag
atgaataaatttctctatctctactgtagtaaggagatgcccagaaaagcacattctaat
atgctaacagttaaagcattacatgtccgtccagagtctggcagatcaccacaggagtgt
tgtttacgtgtatcactaatgccacttcgcctcaatatcgaccaggatgccttgtttttc
ctgaaggattttttcactagcctttctacagacgtggaagtcttaatgactccggatccg
gaagttaaaaagtctcctggtgctgatgtaacctgtagtttgcccaagcatgtcagcagc
ttcaaggacccaagcccagtcatttctttctcagtacacaagcaaacaagccaaaatgat
agtgttgattctgtggatatggttaatggagaggaccatcatttttcacatgaagagatc
acatcgttcagcgatcaaccagtctttttcagagaatttcgatttatatcagaagttcca
atacgtcttgattaccatggcaaacatgtctcaatggatcagggtacattagctgggatt
ttgattggtcttgcacaattaaactgctcagagttaaagttgaagagactttgctatcga
catggtttgttaggtgtggataagctattctcttatgccatcgctgaatggcttaatgac
ataaagaaaaaccagctaccaggaatcctaggaggagtagggcctatgcattcattagtg
caattagttcaaggtctgaaggacttagtatggttaccaatagaacagtaccgaaaggat
ggtcgtattgtaagaggctttcaaagaggagcagcttcctttggtacttccactgcaatg
gcagctttagagctaacaaacagaatggttcaaaccatacaggcagctgcagaaactgct
tatgacatggtctccccaggtcctagttgtatggagacaaaaaaggtcaaacgattctct
cggcatcgcttagctcatcagccagtagacctacgggaaggtgtggccaaagcatacagt
gtggtaaaagagggaattacagacactgcccagaccatatatgaaactgctgctcgagag
catgagaacagaggggtaacgggagcagtaggaggagtcctccgccaaattccaccagct
gtggtgaaacctctcattgtcgcaacagaggcaacctcaaatgttttaggtggaatgaga
aaccaaatccgtccggatgtgcgtcaagaagagtcacagaaatggcgccttggggaggat
tga
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integrated database retrieval system
