Lepidochelys kempii (Atlantic ridley): 140913462
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Entry
140913462 CDS
T11378
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04137
Mitophagy - animal
lkp04140
Autophagy - animal
lkp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140913462 (HIF1A)
04137 Mitophagy - animal
140913462 (HIF1A)
04148 Efferocytosis
140913462 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140913462 (HIF1A)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140913462 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
140913462
NCBI-ProteinID:
XP_073206006
LinkDB
All DBs
Position
6:complement(120303447..120345343)
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AA seq
805 aa
AA seq
DB search
MEITGEKKRISSDRRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLT
ISYLRMRKLLDASDLETEAKMEKEMNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLT
QFELTGHTVFDFTHPCDHEELREMLTHRNGPMKKGKEQNTERSFFLRMKCTLTSRGRTVN
IKSATWKVLHCTGHVRVYDTCNNQTLCGYKKPPMTCLVLICVPIPHPSNIEVPLDSKTFL
SRHSLDMKFSYCDERITELMGYEPEELLGHSIYEYYHALDSDHLTKTHHDMFTKGQVTTG
QYRMLAKHGGYVWVETQATVIYSTKNSQPQCIVCVNYVLSEIVQKELFLSLAQTECMLKP
VESPDMKIFSKADLEDTNSLFEKLKKEPDALTLLAPAPGDTIISLDFSSNESDEQQYDEV
PLYNDVMLPSSSEKLQNINLAMSPLPASEATKPLRSNADPALNREVVSKLEPNTEPLELA
FSSHQRQEQPASPSEASTNQSSPEPRSPNEYCFDVDNDMANEFKLELVEKLFAIDTEAKN
PFSTQETDLDLEMLAPYIPMDDDFQLRSFDQPPSLESGCASTQSVATNTIFQQTHTPSTA
AEEITPVKTECMDDIKTLLVSQSPVLIINETNSAPASPYGGNRSRTASPIRAGKGTLDQT
EKSYPGTPNLLTVTLSKRSAMNEELNPKMLALHNSQRKRKMEYDGSLFQAVGIGSLFQQS
EDCGANASLCWKRVKGCKSNGQNGVGQKTIILLSTDIASKLLGQSMDETGLPQLTSYDCE
VNAPIQGSRNLLQGEELLRALDQVN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaccggcgagaaaaaaaggattagttcagatcgcagaaaggagaagtcgaga
gatgcagccagatgccgaagaagcaaggaatctgaagttttctatgaacttgctcaccag
ctgcctcttcctcatactgtcagcgcacaccttgacaaggcctccattatgaggctgact
atcagctacttacgcatgagaaagctgttagatgcaagtgacctggagacagaagccaaa
atggagaaggagatgaattgcttttacttaaaagcccttgatggatttgtcatggttctt
tccgaggatggtgacatgatttacatgtctgaaaatgtgaacaagtgtatggggctcact
cagtttgagctgactgggcacactgtgttcgattttacccacccatgtgaccatgaagag
ctgagagaaatgcttacacatagaaatggtcctatgaaaaagggcaaagaacagaataca
gagcgtagctttttcctcagaatgaagtgcacactgaccagcaggggaaggaccgtgaat
ataaagtctgcaacatggaaggtacttcactgtacagggcatgttcgtgtgtatgatacc
tgcaataatcagactctctgtggatataagaagcctcccatgacatgcttggtgttgatc
tgtgtacctatccctcatccatcaaacattgaagtccctttggacagcaagacattcctc
agtcgccacagcctggatatgaaattttcatattgtgatgaaagaattacagagctgatg
ggatatgagccagaagaactcttgggtcactccatctatgaatactatcatgctctggac
tctgatcatctgaccaaaactcatcatgatatgttcactaaagggcaagtgactacagga
cagtacagaatgcttgctaaacacggtggatatgtctgggttgaaactcaagcaactgtt
atatacagcactaagaactcccaaccacagtgcatagtgtgtgtaaattacgtcttgagt
gagattgtacagaaggagttatttctttcccttgcacagactgagtgcatgctgaaacca
gtggagtctcctgatatgaaaatattcagcaaggctgacctagaagatactaacagcctc
tttgaaaaacttaaaaaggaaccagatgctttaactttgctcgcaccagctcctggagac
acgattatctctttagatttcagcagtaatgagtctgatgagcaacaatatgatgaagtt
cctttgtataatgatgtaatgctcccctcatccagtgagaaattgcagaatataaatttg
gcaatgtccccacttcctgcctctgaagccacaaagccacttcgtagcaatgctgaccct
gcactcaacagagaagttgtatcaaagctggagccaaacacagagccactcgaacttgca
ttttccagccaccagaggcaagaacagccagccagcccttctgaggcaagcactaaccaa
agttcacctgagccccgtagtcccaatgagtattgctttgatgtggataatgatatggct
aatgagtttaagctggaattagtggaaaaactctttgcaatagacacagaagcaaaaaat
ccattctctactcaggaaactgatttagacttggagatgttagctccttacatcccaatg
gatgatgacttccagttacgatcctttgatcagccaccttcactggagagtggttgtgcg
agcactcagagtgtggccaccaataccatatttcagcaaactcatacgccctctactgcc
gctgaggaaataacaccagtgaaaacagaatgcatggatgacattaagactctacttgtt
tctcagtctcctgtcctcataatcaatgaaaccaacagcgccccagcctcaccatatggt
ggaaatcgaagtcgaactgcatctccaatcagggctggaaaaggaacattggaccagacg
gagaaatcttatccaggaacacccaatttgttaacagtcactttgagtaaaagatctgca
atgaatgaagaactaaatccaaagatgctagctttgcataactctcagagaaagcgaaag
atggaatatgatggctcgctttttcaagcagtgggaattggatctttattccagcagtca
gaagattgtggagcgaatgcatcactttgttggaaacgtgtaaaagggtgcaaatctaat
ggccagaatggagtgggacaaaagacaatcatcttactatcaactgatatagcgagtaag
ctcctaggacagtcaatggatgagactggactaccacaacttaccagttatgattgcgaa
gtaaatgctcccatacaaggcagcagaaacctgctacagggtgaagaattgctcagagct
ctggatcaagttaactga
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