Lepidochelys kempii (Atlantic ridley): 140914660
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Entry
140914660 CDS
T11378
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140914660 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140914660 (ERCC6)
03400 DNA repair and recombination proteins [BR:
lkp03400
]
140914660 (ERCC6)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
140914660 (ERCC6)
DNA repair and recombination proteins [BR:
lkp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
140914660 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
HDA2-3
Motif
Other DBs
NCBI-GeneID:
140914660
NCBI-ProteinID:
XP_073209182
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All DBs
Position
7:complement(59815197..59895896)
Genome browser
AA seq
1532 aa
AA seq
DB search
MPTETGRPPGGSHERGPGAAASDPRPSSAGEAGTAQGTGPCPCDGDLGGSPGAPASENGP
CGSSGVPAREPPRTGQPLLHIDRQQIPSVAPSAQVAELKGLGVDVYDQDVLEQGVLQQVD
NAISDANRATKLASAEAEYQSVLDDLRSCMTSLKQINTIIEQLTPQAVCSKDINRKLDSV
KRQKYNKEQQLKKIKAKQKRLQAVLGGAETFIGTNDVEFQDDEEPGPSSLGSMLMPVQET
EWEELIRTGQMTPFGTKVPQKIEKKPRRLMLNEASDFEKYLADQAKLSSERKRSALKKGP
KNKAQAKNIQCETPTLVIKGKGGKTRTLSKTDKRLKKHMKKLQNHALQIQFKIGMPKEKR
RPEVKEKLRGEPGDESEESECVPDEELFNAEEEEEQEEAAAFFHAEDHSDYELKTLPGGR
KHSGKRNLKEEAEEDEDFFPSSEEEEENTVGNRRVKRCRDDGDEDYYKQRLRRWHKQQLK
DKEERRMAEEDSDESDAEFDEGFRVPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEM
GLGKTIQIIAFLAGLSYSKIRTRGSNYSILLELWTPELETVYQQWSHQCQIQRFKGLGPT
VIVCPATVMHQWVKEFHSWWPPFRVAVLHETGSYTNKKVKLIREMVACHGILITSYSYIR
LMQDNINSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLF
DFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKAD
VKMSLSLPDKNEQVLFCRLTEEQRQVYQNFIDSKEVYQILSGEMQVFSGLVALRKICNHP
DLFSGGPKILKGVPDDELEEADQFGYWKRSGKMIVVESLLKIWHKQGHRVLLFTQSRQML
KILEVFLRDRNYSYLKMDGTTTIASRQPLIARYNEDTSIFVFLLTTRVGGIGVNLTGADR
VIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLK
DPKQRRFFKSNDLYELFTLTSPDGSQGTETSAIFAGTGSDVQAPKRQLKRKLKKPADGAS
KGDLHFKEHNSPKYDKPSHSSSTCQLVNSSSKTIEPVRETTGNLETFNQNSSAKDGTQAT
NNRDSLIKDEEKSLKMAEGSVFQALPGNAWTSENVECSLFGEMREAPTVSTESRHGLVCE
TESSQGKQNDNFEDEHLGGNPHKRTSKTKHSMDMLTLEGHKSNPKKPKHLKGARFEGERI
PYLVKQKQYRKDNQEEEEEQKKNDDYVLERLFKKSGVHSVMKHDAIMEASNPDYVLVEAE
ATRVAQDALKALKISRQRCLGAASGVPTWTGNNGLTGAPSGLKSRFGQKRNPTLLVPNSS
TTSLGKKCKDADIIRKEKVKKNVSSVHFDGKIEGGESSSSALDSSSLLAKMRARNHLILP
QRMENEGAENLQASAPLPTSTEHDELLVDVRNFIAFQAHVDGEASTQEILQEFESRLSAA
QSCVFRELLRNLCTFHRSPNGEGVWKLKPEFC
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgcccacggagacaggccgcccgccgggcgggtcccacgagcggggccctggggccgct
gcgagcgatccgcgtccgagcagcgcgggggaagcggggactgcccaggggacgggcccg
tgcccgtgcgacggcgacctggggggcagccctggagctccggcctccgagaatggcccc
tgcggctcctccggggttcccgcgcgggagcccccccgcacgggacagccgctgttacac
attgacaggcagcagatcccgtccgtggcgcccagtgcccaggttgcggagctgaaaggt
ctgggggtcgacgtgtacgaccaggatgtgctggagcaaggagtcctccagcaggtagac
aatgcgatcagtgacgcgaacagggccacgaaattagccagtgcagaggcagaataccaa
tcggtgctggacgatttaaggtcctgtatgacttctttgaaacagatcaatacaattata
gagcaacttactcctcaagctgtctgtagcaaagatataaacagaaaactagactctgta
aaacgacaaaagtataacaaggagcaacagttaaaaaagatcaaagcaaaacaaaagcgt
ctccaagcagttcttggtggagcagagactttcattggaacaaatgatgttgaatttcag
gatgatgaagagcctggtccatcgtctcttggcagtatgctcatgccagtccaggaaaca
gaatgggaggaactcattcgtactggtcagatgaccccttttggaacaaaggtccctcag
aagatagaaaagaagccgcgcaggttaatgctaaatgaagcatctgattttgagaagtat
ttggcagatcaagctaagctgtcatccgaaaggaaaaggtcagcccttaagaagggacca
aagaataaagcacaggccaagaacattcagtgtgaaactcccacattagtcataaaggga
aaggggggcaaaaccagaaccctgtcaaaaacagacaagcgcctgaaaaagcacatgaag
aaacttcagaaccatgctcttcagatccaatttaagataggaatgccaaaggaaaagagg
cgtcctgaggtcaaggagaagctgagaggtgaaccaggagatgaaagtgaagagtcagaa
tgtgtgcctgatgaggagctttttaatgcagaggaggaggaggaacaggaggaggcggcg
gcattttttcatgctgaggatcattctgattacgaactgaagactttgccaggaggaaga
aaacattcagggaagagaaaccttaaggaagaagctgaggaggatgaagacttcttccca
agctctgaggaagaggaagagaacacagtaggaaatcgtagagtaaagagatgcagagat
gatggagatgaagattactataaacaaaggctaaggagatggcataaacaacaattgaag
gacaaagaggaacgtcgaatggcagaagaagattctgatgaaagtgacgctgaatttgat
gagggtttcagagtaccaggttttctcttcagaaagctttttaagtaccagcagacaggt
gttaggtggctctgggaattgcactgccagcaggcaggaggaattctgggagatgagatg
ggattgggcaagaccatccagataattgccttcttggcaggtctgagctacagcaagatc
aggactcgtggttcaaattacagcatccttcttgaattgtggacaccagaactggagaca
gtataccagcagtggtcacaccagtgtcaaatacagaggtttaaaggtttgggcccaaca
gtgattgtgtgtccagccacagtgatgcatcagtgggtgaaagaattccatagttggtgg
cctccctttagagttgcagttctacatgaaactggctcttacaccaacaaaaaggtgaaa
ctaattcgtgagatggtagcatgccatggcattctaatcacctcctattcatacattcga
ttgatgcaggataatatcaacagctatgactggcattatgtgattttagacgagggtcat
aaaatccggaatccaaatgccgcagtaacacttgcgtgcaaacagttccgcactccccat
cgaatcatcttgtctggctcccctatgcagaataacctaaaggagctctggtccctcttt
gactttgtattcccagggaaattgggaacactgcctgtcttcatggagcaattctctgtt
ccaataaccatgggaggatattccaatgcctctcccgtgcaggtaaaaactgcctacaag
tgtgcatgtgttttacgggacaccataaatccctacttgctgcggagaatgaaggctgat
gtgaaaatgagcttgtcactgccagataaaaatgaacaggttcttttttgccgtttgaca
gaagaacaacggcaagtctaccaaaacttcattgactccaaagaagtttaccagattctc
agtggagaaatgcaggttttctctggacttgtagccttgagaaaaatatgcaaccatcct
gacctcttttctggtggtcccaagattttgaaaggtgtgccagatgatgagttagaagaa
gcagatcaatttggatactggaaacgttctggaaaaatgatagtggtagagtccttactg
aaaatatggcacaagcagggtcacagagtgctgctctttacccagtcgagacagatgctg
aagatccttgaagtatttctgagagacagaaactattcctacctcaagatggatggtacc
acgacaattgcatccagacagccacttatagcaagatacaatgaggatacgtccatcttt
gtttttcttcttacaactcgagtaggtggtattggcgtcaacctgacaggtgctgacaga
gttatcatctatgatcctgattggaatcccagtacagacacacaggctcgagagcgtgct
tggagaataggccagaagaagcaggtgactgtttacaggctccttactgcaggtactatt
gaagagaagatttaccacagacaaatcttcaaacagtttttaacaaacagagtgttgaaa
gacccaaaacaaaggcgctttttcaaatccaacgatctttacgaacttttcactctgacc
agcccagatgggtctcaagggacagaaactagtgctatttttgcaggtaccggttcagat
gttcaagccccgaaacgccaattaaaacggaaacttaaaaagccagctgatggtgcttcc
aaaggtgatctgcattttaaggagcacaactcgcctaaatatgacaagccatcacattct
tcctcgacatgccagttggtgaattcttcttctaaaacaatagagccagttagagaaacc
acaggaaatttggaaactttcaaccaaaacagttctgcgaaagatggtacacaagctaca
aataatagagattcactgattaaagatgaggagaaaagtttgaaaatggccgaggggtct
gtattccaagcactgccagggaatgcatggacttcagagaacgtggaatgttcattattt
ggtgaaatgcgtgaggcacctactgtaagtactgagagcagacatggtctcgtatgtgag
acagagagctcccaggggaaacagaatgataactttgaagatgaacatctaggtggtaat
cctcacaaacgcacctcaaaaactaaacacagtatggatatgctgacacttgagggccac
aagagtaaccctaaaaagccaaaacatctcaaaggtgccagatttgaaggggagcgtatc
ccatatctggtgaaacaaaagcagtacagaaaggacaaccaagaagaggaggaagaacaa
aagaagaatgatgattatgtcttggagagacttttcaaaaaatcaggagtgcacagtgtg
atgaagcatgatgctattatggaggcttccaatccagattatgtgttagtggaagcagaa
gcaacccgagtggcccaggatgccctgaaagccttaaagatctcccgacagcgatgttta
ggagcagcttctggtgtgccaacctggacaggcaacaatggtctgactggtgcaccatcc
ggactaaagagtaggtttggtcagaaaaggaaccctactttgcttgtcccaaattcctcc
actacatctcttggaaagaaatgcaaggatgctgatataataaggaaagagaaggtaaag
aaaaatgtttccagtgtacattttgatgggaaaatcgaaggaggagaatcatcatccagt
gcactagattcatcatctttgttagcgaagatgagggcgagaaaccaccttattttacca
cagaggatggagaatgagggtgctgagaatcttcaggcttctgctccactcccaacttcg
acagaacatgacgaattgctagtggatgtacgaaactttatagcatttcaggctcatgtg
gacggagaggcgagtactcaagagatactgcaggagttcgaatccaggctgtcagcagca
cagtcttgtgtgttcagagaacttctgagaaatctttgtactttccatagaagcccaaat
ggtgaaggtgtctggaaactaaagccagaattctgttga
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integrated database retrieval system
