Lepidochelys kempii (Atlantic ridley): 140914701
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Entry
140914701 CDS
T11378
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
140914701 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lkp04040
]
140914701 (KCNMA1)
Ion channels [BR:
lkp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
140914701 (KCNMA1)
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Ortholog
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
140914701
NCBI-ProteinID:
XP_073209295
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All DBs
Position
7:complement(64571365..65426630)
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AA seq
1330 aa
AA seq
DB search
MANGSGVASSSGSSASGGSGGVRMSNSISAGNLNTDSSSSPVSVPKMDALIIPVTMEVPC
DSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINAGGETQA
DGTCKPTDEKEETVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFID
SSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPV
FVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFI
HLVENSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLA
MFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNV
EIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADP
DAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGF
IAQSCLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNEMYTEYLSSAFVGLSFPAV
CELVFAKLKLLMIAIEYKSEKRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEVKRAF
FYCKACHDDITDPKRIKKCGCKRPKMSIYKRMKLACCFDCGRSERDCSCMSGSVHSNMDT
LERAFPLSSVSVNDCSTSLRAFEDEHPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIP
GNEQIDNMDASVKKYDSTGMFHWCPGKDIEKVILTRSEAAMTVLSGHVVVCIFGDAKSAL
IGVRNLVMPLRASNFHYHELKHIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRA
VNINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGM
DRSSPDNSPVHGLLRQPSITTGANIPIITELAKPGKLLPLVSISQEKNSGTHILMITELV
NDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTG
GATPELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKA
LKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSR
ASLSHSSHSSYSSSKKSSSVHSIPSTANRQNRTKTRDSREKQNTEGVSLGNICKRRSRMV
AAKQQEVFLCATRMNRMGQAEKKWFTDEPDNAYPRNIQIKPMSTHMANQINQYKSTSSLI
PPIREVEDEC
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcgtcgccagcagcagcggcagcagcgcctcgggaggcagcggc
ggcgttagaatgagtaacagcatcagcgccggcaatctcaacacggactcgtcctcgtcc
ccggtcagcgtgcccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgc
gatagccgcggccagcgcatgtggtgggctttcctcgcctcgtccatggtcacgttcttt
ggcgggctctttatcatcctgctctggaggaccctcaagtacctgtggaccgtctgctgt
cactgcggggtcaaaaacaaggaggcccagaagattaatgctggtggggaaacccaggct
gatgggacctgtaaacctacagatgagaaagaggagactgtcgcagcagaagtgggctgg
atgacttctgtgaaagactgggcaggagtgatgatatctgcccagactctaactggcaga
gtccttgttgtcttagtctttgctcttagtattggtgctcttgtaatatacttcatagat
tcgtcaaacccaatagaatcctgccagaatttctacaaagatttcacgttacagatagac
atggctttcaacgtattcttcctactctacttcggcttgcgtttcattgcagccaatgac
aagctgtggttttggctggaagttaactcggtagtagatttcttcacagtccctccagtg
tttgtgtcagtgtatttaaacagaagttggcttggtttaagatttttaagagcccttaga
ctgatacagttttcagaaattttgcagtttctgaatatcctaaaaacaagtaattccatc
aaactggtgaatctgtgctctatattcatcagcacatggctgacagcagctgggttcata
catttggtggagaactcaggggatccatgggaaaatttccaaaataaccaaccacttaca
tattgggaatgtgtttatttactaatggttacaatgtccactgttggctatggagatgtt
tatgcaaaaacaacccttggtcgccttttcatggtcttcttcatcctcgggggattggcc
atgtttgccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggt
ggttcctatagtgcggttagtggaagaaagcacatagttgtctgtggtcacataacactt
gaaagtgtgtccaacttcctgaaggacttcctgcacaaggacagggatgatgtgaacgtg
gaaatcgtctttctgcataatatctcccctaaccttgagctggaagctctttttaaacga
cacttcactcaggtggaattttatcagggttcagttctcaatccgcatgacctggcgaga
gtaaagatagagtcagcagatgcatgcctaatccttgccaataaatactgcgctgaccca
gatgctgaagatgcctccaatattatgagagtaatttctataaagaattaccatccgaag
ataagaattatcactcagatgctgcagtatcataacaaggcccatctgctaaatatccca
agctggaattggaaagaaggggatgacgcaatctgtcttgctgaactcaagctgggtttc
atagcccagagctgcctggcaccgggcctctcgacaatgctagccaacctcttctctatg
aggtcattcataaagattgaggaggatacgtggcagaaatactatctagaaggagtctca
aatgaaatgtatacagaatatctatctagtgcctttgtcggtctgtctttccctgcagtt
tgtgaactggtgtttgcaaagctaaagctcttaatgatagccatagaatacaagtcagaa
aaacgggaaagcagaagccgaaagcgtatattaatcaatcctggaaaccatgtcaagatt
caagaaggtactttaggattcttcattgcaagtgatgccaaagaagtgaaaagggcattt
ttttactgcaaggcctgtcatgatgacatcacggatcccaaaaggataaaaaaatgtggc
tgcaaacggcccaagatgtccatctacaagagaatgaaactggcatgttgttttgattgc
ggacgctctgagcgtgactgctcttgcatgtcaggcagtgtacatagtaacatggacacc
cttgagagagccttcccactttcttctgtctctgttaatgattgctccaccagtttacgt
gcctttgaagatgaacatccgtcgacactgtcacccaaaaaaaagcagcgaaatggaggc
atgagaaattcacccaactcctcgcccaaactgatgaggcatgaccccttgttaattccc
ggcaatgagcagattgacaacatggatgccagtgtgaaaaaatatgactccacggggatg
tttcattggtgtccaggaaaggacattgaaaaggtcattttgacccggagtgaagcagcg
atgacagttttaagtggtcatgtggtcgtttgcatatttggggatgctaagtctgcattg
attggagtaagaaatctagtgatgccattacgagccagcaactttcactaccatgaactc
aagcacattgtgtttgtgggttcacttgaatatctgaaaagggaatgggagacgctgcat
aacttccccaaggtttcaatcttgcctggtacgccattaagtcgggctgatttaagggct
gtcaacatcaacctctgcgacatgtgcgttatcctgtcagccaatcagaataatattgat
gatgcttcgctgcaggacaaggaatgcatcttggcgtcactcaacatcaaatctatgcag
tttgatgacagcattggggtcttgcaggctaattcccaagggtttacaccaccaggaatg
gataggtcatctccagacaacagtccagtccatggtctgttacgtcaaccctcaatcaca
acaggagccaacatacctattataacagagctagctaagcctggcaaacttctgcctttg
gtttcaatcagtcaggaaaaaaacagtggaacccacatactaatgataactgaactggta
aacgattcaaacgttcagtttttggaccaagatgatgacgacgacccagacacagaattg
tatcttacacagccatttgcatgtggaactgcattcgccgtcagtgtattggactccctc
atgagcgctacatacttcaatgacaatatcctcacactgatacggacgttggtaacagga
ggagccacaccagagctggaagcgctgattgctgaggagaatgcactgagaggaggctac
agcacgccccagacacttgcaaacagagacaggtgtcgagttgctcagttggctttgtat
gatgggccatttgcagacctaggggatggtggttgttatggagatctgttttgtaaagca
ctgaaaacatacaatatgctttgttttggaatttaccgattgagagatgcacatctaagc
acacctagccaatgcactaaacgctatgttatcacaaacccaccctatgagtttgagctt
gtgcccacagacttgatcttctgtttgatgcaatttgaccacaatgctggccagtcccgg
gccagtctctctcattcctcccattcttcgtactcctccagcaaaaagagctcatcggtt
cactctatcccatcgacagcaaaccgacagaaccgcaccaagactcgggactcccgggaa
aaacagaacacagaaggtgtatctctaggaaacatatgcaagaggaggagtcgcatggta
gctgccaaacagcaagaggtgtttttatgtgcaacaaggatgaatagaatgggccaagca
gaaaagaaatggtttacagatgagccggataatgcatatcccagaaacattcaaatcaag
cccatgagcactcacatggccaatcagatcaatcagtataaatctacaagcagcttgata
ccaccaatcagagaagttgaagatgaatgttga
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