Lepidochelys kempii (Atlantic ridley): 140914781
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Entry
140914781 CDS
T11378
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140914781 (JMJD1C)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
140914781 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
zf-C5HC2
C1_2
FYVE
Motif
Other DBs
NCBI-GeneID:
140914781
NCBI-ProteinID:
XP_073209533
LinkDB
All DBs
Position
7:complement(78718266..79024988)
Genome browser
AA seq
2586 aa
AA seq
DB search
MAVVETRPELVGKRFLCVGGAEEEPPERGESGRWRAGVIRAVSHRDSHSPELAVYVEFDD
LEWEKREWVKVYEDFAAFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYR
SITAVEFLVDKQLDFVTEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKVWVKEQKVQEIFM
QGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTFL
DDVVHSLLKGENIGITSRRRSRSNQNSNTAHGHYTRAQANSPRPAMNSQTATPKQNSHQH
HQQRNARPNKRKGSDSSMPDEEKMKEEKYDYICRGENPKSKHKHFISKRRKPEEDEKKLS
MKRVRTDNISDYSESSDSENSNKRLTDSSSEQNSENELKSKNTSNINGEEGKSQSSEGVE
EQTLIDRQSPWDEIQADKNHQDAERPKSAELDLQEKKSLRPAEQLKFHSQSASDARVQEC
SVENRNTMELLTNEQFVPRPPTPKCGGDATTETNSDKESQENAASTFGLQKLQKIVSCGS
NLKHQFTNVNFLEVRKRETDQSWVSDVVSKMDLIQSGIMKTTVNEHLNPEKEKVQHGSFV
SSLNVVSLAEEGKLPKQSPASDAMKSKSSTSVDHPKTKSYSSPDVKPKLTQSPDTVKSKV
SYQNSHVTGVSRSANKTEHDVPRSSFHPVPTRVSALEATKSPLIIDKNEHFTVYRDPTLI
GQETGTNHISPYLHQHNYPLHSSSHRTCLNPNTHHPALSGAPHLLTGSSNQTPLSAINTH
SLSTASHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQMLQHQSP
HLLGQAHPSASYNQIGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPS
PWLHQPTPVTSADSLGLLSHIPVRPSSADPHRPLKLTTHSSPPLSKNIVDHHKEELERKA
FIEPLRSVTTAPVKTDLEHSRTQTAKESHLHRHFVDPMLSQLQKPPQETGERLSKYKEEH
RRILQESIEVAPFTAKIKALEGERENYSRVTPLSSSSPKSYAVKHDKEPERSVSELYKIK
HSAPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSSLYVDKQNSCLSTAANPQSLTSFISS
LSKPPPLIKHQPEGEGSVSKITEQLSHQVTSHSVNSFRSDCRSPTQLSVSSSNTLRSMPA
LHRAPVFHPPVHQNLERKESSYSSLSPPTLTPVQPVNAGGKIQELQKPPTLVPEPKEAQT
MYKSTSDQNLSDIWKSNNAPNNEKVEWHVERTSGKTQSATASVIVRPPSSTKYDSMPGMQ
SAPKDRVNERSSSTGTNQTECVKPVEARDTGRIILPNMNSETTHTHYEKNFPSVSQGSIP
SSVTPTTTIVCSTKTDVTTSAATTTGVSSWGSSEVTYSLSNKVLACTPLECTSSRTVSQV
VAQTQESKVSTTAPITPASGKTGSAIQPNSGFSGPTDFIHLKKHKAALAAAQFKSSNASE
IESNTVKNQTFPASISLDSAIVCNTINKANCVGNGQASQTSQLNYHTKLKKAWLTRHSEE
DKNTNKKENSGNYVSEIIKPCTVNLIASTSSDLQNNIDSTILADKFVKEDKHTRRKAKRT
YESGSECGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKER
SKLKLQSSSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSK
KGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDDAMSLWTHDNYEDDEVDLE
TSKYILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVC
QKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAM
HSLREKFEIKSYCQCTSKQSIQTGKFPAMNGVSQVLQNVLNHSNKISLCMPESQQPNTPQ
KSETNGNTSPGSDVSADSKLTPPESQSPLHWLADLAEQKAREEKKENKECLPGKHTKEER
DQESSESLNCKTSPPVSQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTTGGK
GGRTMPNILDDIIASVVENKIPPNRPPKINVKSELKDGPKDGQKSILDDCSKFYSGIPHS
WICDKHILWLKDHKNSSNWKLFKECWKQGKPVLVSGVHKKMNINLWKAESISLDFGDHKA
DLLNCKDSIISNTNVKEFWDGFEEVAKRQKIKGGETVILKLKDWPSGEDFKAMMPARYED
LLKSLPLPEYCNPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAAAKDQDIGTTNLHVEVS
DVVNILAYVGIAKGNGVLSKAGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDVD
KIREFLQKPKKPSTLKVNSRSWRIFVSWCDKVWIEMIEAPVPAFLFPVYWSNLGIAKEQG
LEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTIIQFLGDAIILPAGALHQVQNFHSC
IQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKMQVKNILYHAVKEMVRALKIHENEM
EDVEEN
NT seq
7761 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtggagacgcggccggagctggtggggaagcggttcctgtgtgtcgggggc
gccgaagaggagccgccggagcgcggggagagcgggcgctggcgcgctggggtcatccgc
gccgtgtcccaccgggattcgcacagccccgagctggcggtatatgtggaatttgatgac
cttgaatgggaaaaacgagagtgggttaaggtttatgaagattttgcagccttcttggtg
gagtaccagctggtctgggcaaaaagaaaggaccctagccagactcagggatcaaagatc
aaacaaattcaatggcctgcattgacattcaagcccttggttggaaaaagtgtgtacagg
tcgatcactgcagtagaattccttgtggacaaacaactggattttgtaactgaagatagt
gcctttcagccctatcaggacgacgtagacagtctaaacccagttctcagggacaacccg
cagcttcatgaggaagtaaaagtctgggtaaaagaacaaaaggttcaggagatttttatg
caaggtccatattccttaaacggctatagagtgagagtatacagacaggattctgccacc
cagtggttcactggtataattactcatcatgatctttttacccgcactatgattgttatg
aatgaccaggtgttagaaccacagaatgttgatccttctatggttcagatgacctttcta
gatgatgttgttcactctttgttgaaaggtgaaaatattggcatcacatcacgtcgcagg
tctcgttccaaccagaacagcaacacagcccacgggcattatacacgtgctcaagcaaat
agtcccagaccagccatgaattcccaaactgcaacaccaaaacagaactctcaccagcac
catcaacaacggaatgctcgtccaaataaaaggaaaggctcagatagcagcatgcctgat
gaggagaagatgaaggaagaaaaatatgattatatatgtcgaggagaaaatcccaaaagt
aaacataaacactttattagtaaaagaagaaaacctgaagaggatgaaaagaaactaagt
atgaaaagagtgcggacagacaatatctctgactactctgagagcagtgactcagaaaat
tcaaataaaagattaacagattcttcatcagagcaaaattcagagaatgagttgaaaagc
aagaacacttcaaacataaatggagaagaaggaaaatcccagagtagtgagggggtagag
gaacagacactaatagataggcagtctccatgggatgaaatacaagcagataaaaatcat
caagatgcagaaagaccaaagtcagctgaattagacctacaagaaaaaaaatcactccgt
ccagcagagcagctgaaatttcatagtcagagtgccagtgatgcacgtgttcaagagtgc
agtgtagaaaatcggaatactatggaattgttaacaaatgagcagtttgtacccaggccg
cctacaccaaaatgtggtggtgatgcaactactgaaaccaattctgataaggagagccag
gaaaatgctgcaagtacctttgggttgcagaaacttcagaaaatagtgtcctgtggcagc
aatttaaaacatcaatttacaaatgtaaattttctagaagtaagaaaacgagaaactgat
caaagttgggttagcgatgttgtcagtaaaatggatttgatacagtctgggattatgaaa
acgacagtaaatgaacatttaaatcctgaaaaagaaaaagttcaacatggctcatttgtg
tcttcattaaatgtagtttcattagctgaagagggtaaactacctaaacaaagtccagcc
tctgatgctatgaagtcaaaatctagtacttcagttgatcatcctaaaacaaagtcatat
tcttcacctgatgttaagcctaaactcacccaatctcctgatactgtgaagtcaaaggtt
agttatcagaacagccatgttactggagtatcaaggtcagcaaataaaactgagcatgat
gtgcctaggtctagttttcatccggttccaactcgagttagtgcgttagaagctactaaa
agtcctcttattattgacaagaatgaacatttcacagtatacagggatcccactcttatt
ggtcaagaaacaggaactaatcacatttcaccttacttacatcagcataattatcctctt
cattcctcatcccacagaacctgtttaaatccgaacacgcatcatcctgcattaagtggt
gcaccccatctgttaactgggtcttcaaatcagactccattatctgctattaacactcat
tctcttagtactgcatctcaccattctgttcatcaccctcatctacttcctgcagtgtta
cctggagtgcctacagcttccttattaggtggccatccacgactggagactgctcatgcc
agcagcttaagccatttggcattagcacaccagcagcagatgttacagcaccagtctcca
catcttcttggacaagctcatccttctgcttcatataatcagataggactttatccaatt
atttggcagtatccaaatggaacacatgcttactcaggacttggtctaccctcctctaaa
tgggtccatccagaaactcctgttaatgctgaggcttctttaagaaggaatactcccagc
ccttggttacaccaacccacccctgtgacctcagctgacagtcttgggttactgagtcac
attcctgtaagaccatccagtgcagatccgcatcggccactcaaattgacaacacattct
agtccaccattgtccaaaaatatagtagatcatcacaaagaagaattggagaggaaagca
tttattgaacctttacgttctgttacaactgcacctgtaaagactgatctggaacatagc
agaacacagactgcaaaagagagtcatttgcacagacattttgtggacccaatgttgagt
caattgcagaagccacctcaagagactggagagcgactaagcaaatataaagaagaacat
agacggatacttcaagagagtattgaagttgctccttttacagctaaaatcaaggctctt
gagggtgagagagagaattattctagagtaacgccattatcgtcttctagccccaaaagc
tatgcagtgaaacatgacaaagaaccagagcgttctgtgtcagaactttataaaatcaag
cattcagcaccacagagtttgccacaaagtaactatttcaccaccttgtcaaacagtgta
gtgaacgaaccaccaagatcctacccatctaaggaagtttcaagtttgtatgtcgataaa
cagaatagttgtctttcaacagcagctaatccccagtctctcacttcttttatttcatct
ctttcaaaacctccacctttgattaagcatcaaccagagggtgaaggttcggtaagcaag
ataacagagcagctttcccatcaagtgacatctcactctgtaaattcttttagaagtgac
tgcagaagccctactcagttgtcagtttcatcttcaaatactctccgaagcatgcctgcc
ttacacagagcaccagtgtttcaccctccagttcatcaaaacctggagagaaaggaaagc
agctatagcagtctttcacctccaaccctaacacctgtgcagccagttaatgctggtggc
aaaatccaagaattacaaaaaccaccaactttagtacctgaacctaaggaagcgcaaaca
atgtacaaaagcacttctgaccagaatttatcagatatttggaaatctaataatgccccg
aacaacgaaaaagttgaatggcatgttgagcgaaccagtggaaaaacgcaatctgccaca
gcatctgtcattgtacgtccaccttctagtacaaaatatgatagtatgccaggaatgcag
tcagctcccaaagatcgagttaatgaaagatcttcttcaactgggacaaatcaaacagaa
tgcgtaaaacctgtggaagccagagacactggaagaataattctgccaaatatgaactca
gagactacacacacacattatgaaaagaactttccgtctgtctcacaaggcagcattccc
agttctgtcacacctaccacaactatagtatgcagtaccaaaacagatgtaaccacatct
gcagccacaactaccggtgtttcaagctggggtagttcagaagtgacttattctttatca
aacaaagttttggcctgcacaccactggaatgtacctcctctagaacagtaagtcaggta
gtggcacagacacaagaaagcaaggtcagtaccacagctccaattacaccagccagtggc
aagacaggaagtgccattcagcccaactctggattttctggcccaactgattttatccat
ttgaaaaagcacaaggcagcattggctgcagctcaatttaaaagtagtaatgccagtgag
attgagtccaatactgtgaaaaatcagacatttccagcctccatttccctagacagtgct
atcgtctgcaatacaataaacaaagccaactgtgtaggcaatgggcaggcttcccagaca
agtcagctgaactaccacacaaaactgaaaaaggcttggcttactagacattcagaagaa
gataaaaacactaataaaaaagagaattcagggaattatgtatcagaaattattaaacca
tgtactgtcaatttaatagcttctacatctagtgatttacaaaataacatagatagtaca
atcctagcagataaatttgtgaaagaagataaacacacaagaagaaaagcaaaaaggact
tacgaatctggctctgaatgtggagactctgatgaaagtgagagcaagtcagagcaaagg
actaaacggcagcctaagccaacttacaaaaagaaacaaaatgatttgcaaaagaaaaag
ggtgatacagaggaagaagtaaaacccaatggtgttcttagcaggagtgccaaagaaaga
agcaagttgaagttacagagcagcagtaacagcactggaatacctcgttcagtattaaaa
gactggcgcaaagtaaagaagctgaagcaaactggagaatcctttctgcaggatgactct
tgctctgaaatagggcctaatctgcagaaatgcagagaatgtagactcattagaagtaag
aaaggtgaagaaccaactcactcgccagtattttgtagattttattactttcgtcggttg
tcttttagtaagaatggagttgttaggatagatggtttctcttctcctgatcaatatgat
gatgatgcaatgagtttgtggacacatgacaattatgaagatgatgaagtggacctagag
acttctaaatacattttagacatcataggtgataaattttgtcagctagtaacatctgag
aaaacagccatgtcctgggtgaagaaagatgccaaaattgcctggaagagagcagtgaga
ggagtccgtgagatgtgtgatgcatgtgaagccacgttgtttaacattcattgggtctgc
caaaaatgtgggtttgtggtctgcttagattgttataaagcaaaggaaaggaagagttct
agagataaagaattatatgcttggatgaaatgtgtgaaaggacagcctcatgatcacaag
catttgatgccaactcagattattccaggctctgttctgacagatcttctagatgccatg
catagtcttagagagaaatttgagattaaatcctattgtcagtgtaccagcaaacagagc
atacaaactgggaagttccctgcaatgaatggtgtctctcaggttttacagaatgtcctt
aatcacagtaataaaatttctctgtgcatgcctgagtctcagcagccgaatacccctcaa
aagtctgagacaaatggcaatacaagtccagggagtgatgtaagtgcagacagcaagtta
actccaccagaatcccagtctccactgcattggttagctgatctagcagagcaaaaagcc
agagaggaaaagaaagaaaataaagaatgtcttcctggaaaacatactaaagaagagaga
gaccaagagagttcagagtctctaaattgtaaaacatctcctcctgtgtcccagaacaac
gaacagggctcaaccttacgagacctactgactacaacagctggcaaactgcgtctgggc
tctacagatgctggcattgcttttgctccagtttactctacaggcacaacaggtggcaaa
ggtggaaggactatgccaaacattcttgatgacataattgcttcagttgtagaaaacaag
attccaccaaatagaccaccaaagataaatgtaaaatctgaactgaaggatgggccaaaa
gatggtcaaaaatctattctggatgattgcagtaaattctacagcggtattccacattcc
tggatctgtgataagcatattttgtggctcaaagatcataaaaacagcagcaactggaag
ctctttaaagagtgctggaaacaaggaaagcctgtgttagtgtctggagtgcacaagaag
atgaacatcaacttgtggaaggcagagtcaattagcctagattttggagaccacaaagct
gatctgctaaactgcaaagacagcattatttcaaacaccaatgtcaaggaattctgggat
ggttttgaagaagttgcaaaacggcaaaaaataaaaggtggggaaacagttatattaaaa
ctgaaagactggccctctggtgaagacttcaaggctatgatgcctgcaaggtatgaagac
ttattaaaaagtttaccactgccagaatattgtaacccagaaggaaaattgaacttggct
tcccatttaccagggttttttgtacgtccagatttgggacccagattatgcagtgcgtac
ggtgtggctgctgctaaagatcaagatataggaactacaaatctccatgttgaagtttct
gatgtagtgaacatccttgcctatgtgggcatagcaaaaggaaatggagtactctcaaaa
gcaggagttttaaagaagtttgaagaagaagatttggatgaccttttaaggaaaagattg
aaagactcaagtgaattacctggggctttgtggcacatttatgctggcaaagatgttgac
aagataagagaatttctgcaaaagccaaagaagccatcaactttaaaagtgaactctcga
agttggagaatctttgtgagctggtgtgacaaagtgtggatagagatgattgaggcccca
gtgccagccttcctgtttcctgtatattggtctaatcttggaattgcaaaagaacagggt
ctagaagttttaccagagcatgatccaatacgtgaccagagttggtatgtgaacaaaaaa
cttcgccaaagacttcttgaagaatatggagtaaaaacctgcactattattcagttcctt
ggtgatgctattattttaccagcaggagcccttcatcaggtgcaaaattttcacagctgc
attcaagtaactgaagactttgtgtctccagaacatcttgtacagtcatttcacttaaca
caggaactgaggctgtcaaaagaagaaatcaattacgatgataaaatgcaggttaaaaat
atcttgtatcacgcagttaaggaaatggtgagagctttgaagattcatgaaaatgaaatg
gaagatgtggaagagaactaa
DBGET
integrated database retrieval system
