Lepidochelys kempii (Atlantic ridley): 140914911
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Entry
140914911 CDS
T11378
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkp03021
]
140914911 (BTAF1)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
140914911 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_2
HEAT_MROH2B_C
Vac14_Fab1_bd
HEAT_GCN1
HEAT_GCN1_C
TPR_Trm732_C
HEAT_EZ
HEAT_GCN1_C_2
UTP20
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
140914911
NCBI-ProteinID:
XP_073210017
LinkDB
All DBs
Position
7:complement(94964671..95065170)
Genome browser
AA seq
1880 aa
AA seq
DB search
MSLGKKVAATTVAQTMVYGWQMKEMIKLLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHP
HELNNLLSKVLIYLRSTNWDTRIAAGQAVEAIVKNVPEWKPTPRPKQESDSESPMDDSCA
SDRLRFDRFDICRLLKHGASLLGSAGAEFEVQDDKSGEVDPKERIARQRKLLQKKLGLDM
GAAIGMNTEDLFNDEDLDYTPTSASLVNKQPVGKTSGCLTARNNTTLQAAELIDSEFRAG
MSSRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDGEPEEKRRKIANVVINQPATDSKV
LVDNAPEEANEWPLESFCEEVCNDLFNPSWEVRHGAGTALREILKAHGKSGGKMGDSTVE
EMAQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAPVRETCAQTLGVVLKHMNETGVHK
TVDILLKLLTQDQWEVRHGGLLGIKYALAIRQDTINTLLPKVLPAIIEGLQDLDDDVRAV
AAASLVPVVESLVHLQSQKVPFILNTLWDALLELDDLTASTNSIMILLSSLLTYPQVQKC
SIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLSTQDQSSSAWLTPILQDMLRHIFQ
FCILESSQDILDLIHKVWLELLNKASVQYVVAAACPWMGAWLCLMMQPSHLPIDLNMLLE
VKARSKEKAGGKLRQGQTQNKEVIQEYIAGADSITEDLATRDYVVMRARVMAAKLLGALC
CCICDPSVNTVPQEIKPAESLAQLLLFHLNSKSALQRISVALVICEWAALQKECKAVALS
VQPRLLGVLSEHLYYDEIAVPFTRMQNECKQLISSLADAHIDIGNRVNYSVFTIDQANEL
VTTVFNEVTSAFNLNPNILQQLDSKRQQVQMTVTETNQEWQVLQLRVHTFAACAVVSLQQ
LPEKLNPVIKPLMETVKKEENILVQNYAALCVAKLLQQCTSRSPCPNSKIIKNLCNSLCV
DPHLTPLAACPAQPQSSHENSKGPNSERDGMHHTVTKHRGIITLYRHQKAAFAITSRRGP
TPKAPKAQIADLPTGSSGNLTTELDEAQKPYIVQRRGAEFALSTIAKHFGAEMVIGLPHL
WDAMVGPLRNNINLNSFDRKSLLEKGDVSAQELVNSLQVFETTAASMDIQLHPLLIQHLP
HLYVCLQHPSTAVRHMVARCVGVMSKIATMDTMNILLEKVIPWLGAIDDNTKQEGAIEAL
ASVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNM
SEELIQLKAKERHFLEQLLDGKKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGIL
CDDMGLGKTLQSICILAGDHCLRAQEYARTKLVDSVPLPSLVVCPPTLTGHWVDEVSKFC
SKEYLNPLHYTGPPTERARLQHQVKKHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVI
KNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPI
LASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQV
QLYEDFAKSRAKCDVDETVSSASLSEETERPKLKATGHVFQALQYLRKLCNHPALVLTTQ
HPEYKRTAEQLAAHNSSLRDIQHAPKLSALKQLLLDCGLGNGGSSESGTEAVVAQHRILI
FCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVG
GLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQK
FKMNIANTVISQENASLQSMGTDQLLDLFTLDKDGKSEKADTSSSGKASMKAVLENLGEL
WDPEQYDSEYSLENFMHSLK
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggggaagaaggtagcagccactacagttgcacagacaatggtttacggatgg
caaatgaaggaaatgattaaattgcttgatcgtctcttcattttactggacactggtacc
acaccggtaacaagaaaagcagctgcacagcaacttggggaggtggtgaaactccatccc
catgaactgaataatctcttatctaaagtgttaatatacttaaggagtacaaattgggat
actcgcatagcagctggccaggctgttgaagcaatagtgaaaaatgtaccagagtggaag
ccaactccaagaccaaaacaagaatctgattcagaaagtcctatggacgattcatgtgcc
agtgatagactgcgttttgataggtttgatatctgtcgactattaaaacatggagcatct
cttcttggatctgctggtgcagagtttgaggtacaagatgacaaatcaggtgaagttgat
cctaaagagaggatagcacgacaaaggaaactgttacaaaagaaacttggacttgatatg
ggagctgcaattggaatgaacactgaagacctgttcaatgatgaggatttggactatact
cctacttcagcttcacttgtaaacaaacaacctgtaggtaaaacctcgggctgtttgact
gcaaggaataatacaactcttcaggctgctgagttgattgattcagaatttcgagctggt
atgagcagtagacaaaagaataaagctaaaaggatggctaagctatttgcaaagcaaaga
tccagggatgcagtagagactaatgagaaaagcaatgatagcactgatggggaaccagaa
gaaaagcgcagaaaaatagcaaatgttgtcatcaaccagcctgccactgactcaaaagtt
ttggtagacaatgcaccagaagaggcaaatgaatggcctttagaaagcttttgtgaagaa
gtatgcaatgatctctttaacccatcctgggaggttcggcatggtgcaggcactgcgctg
agggaaatacttaaagcacacgggaaaagtggtggcaaaatgggagacagtactgtagaa
gagatggctcagcagcatcaggaatggctggaagacttagttattagactcctttgtgtg
tttgcattagacagattcggagactttgtttcagatgaagttgtagcaccagtacgtgag
acttgtgctcagactttgggagtagtattgaaacatatgaatgagactggagttcataaa
actgtggatattctcctgaagttgctcacacaagatcaatgggaagtgagacatggcggt
ctgctaggaataaagtatgcgttggcaattcgtcaggatacgattaatactttattgcct
aaagtcttgcctgcaataattgaaggtctccaagacctggatgacgatgtccgagctgtt
gctgcggcatctttagtaccggtagtggaaagccttgttcatcttcagtcacaaaaggtg
ccctttattcttaatacactgtgggatgctcttctggaattggatgatctgacggcttct
acaaacagcatcatgatccttctttcctcccttctaacttatcctcaggtccaaaaatgc
agtattcagcaatcactcaccgttttggtcccacgtgtatggccattcttgcatcatact
atatcatctgttcgaaaagcagcgttggaaactttatttacgctgttatctacccaagac
cagagttcttcagcctggctaactccgatcctgcaagatatgttgaggcacatttttcag
ttttgtattttagaaagcagccaagatattctggatcttattcacaaggtgtggctggaa
ctgttaaacaaagcatcagtacaatacgtggtagcagcggcttgtccgtggatgggagcc
tggctctgcttaatgatgcagccttctcacttgcctattgatttaaatatgttgctagaa
gtaaaagccagatcaaaggaaaaagcaggtggcaagctgcgtcaaggtcaaacccagaac
aaagaagtgatacaggagtatattgctggtgcagacagcattacagaagatctggcaacc
agggattatgttgttatgcgagcccgggtgatggcagcaaagttgttaggagcactttgc
tgctgtatttgtgatccaagtgtaaataccgttcctcaagaaataaaaccagctgaatca
ctagctcagctactgcttttccatttgaattcgaaatctgccttgcagaggattagtgtt
gcgttagtaatttgtgagtgggctgccttgcaaaaggaatgtaaagctgtagccctttct
gtgcagccacgcttacttggagtcctttctgagcacctttattatgatgaaattgctgtt
ccttttacacgaatgcagaatgaatgtaaacaactcatttcatcactagctgatgcacac
attgacattgggaacagagtaaactacagtgtatttacaatagatcaagctaatgaactg
gttactactgttttcaatgaagttacatcagcttttaatttaaatcctaatattttacaa
caattggacagtaaacgacaacaagtccaaatgacggttacggaaacaaaccaggaatgg
caagtgttacagctgcgagtccatacttttgctgcatgtgctgttgtgagcttacaacaa
cttccagaaaaactaaatcctgtcataaaacctttaatggaaactgtcaaaaaagaagag
aacatactggtacaaaactacgcagctttgtgcgtagctaagttacttcaacagtgtaca
tcaagatctccatgccccaactctaagatcataaaaaatctctgcaactctctctgtgtg
gacccacatcttactcccttagcagcatgtcctgcacaacctcaaagcagccatgaaaac
tctaaaggacccaactctgagagagatgggatgcaccatactgtcaccaagcacagagga
ataattactctgtatagacatcagaaagctgcttttgccatcacaagtaggcgaggtcct
acaccaaaggctccaaaagcccaaattgcagaccttccaacgggcagtagtggaaacctc
accacagaacttgatgaggctcagaagccatatattgtacagaggagaggagctgaattt
gccttatctactatagctaaacatttcggtgctgaaatggtaataggattgccacatctc
tgggatgctatggttggtccactaagaaataatattaacctaaacagttttgatcggaaa
tccttattggaaaagggagatgtgtctgctcaggagttggtcaattctctacaggtgttt
gaaacaacagcagcgtcaatggacattcagcttcaccctttgttgatacagcatttgcct
catctttatgtgtgccttcagcatccaagcactgcagtgagacacatggttgctcgttgt
gtaggtgttatgagcaaaatagctaccatggatacaatgaatattttgttagagaaggtt
attccatggctgggagcaatagatgacaataccaaacaagagggtgcaattgaagcgctt
gcttctgtaatggaacagctagatgttggtattgttccatatattgtccttctagtggtc
ccagttttgggtcgaatgagtgatcagacggacagtgtacgtttcatggctactcagtgc
tttgcaacactaattagactaatgccccttgaggctggcattccagatccaccaaacatg
tctgaagaattaatccaactgaaagccaaagagcgccattttctggagcaactattggat
ggaaaaaaattggaaaactataaaattccggtcccaatcaaagcagaactcagaaaatat
cagcaggatggtgtcaattggctggcatttctcaataagtacaaacttcatggaattctt
tgtgatgatatgggtttaggaaaaacattgcagtccatttgtattcttgcaggagatcat
tgcctcagggctcaagaatatgcaagaactaaattggtagacagtgttcctcttccatcc
ttggtggtttgtcctccaacgcttacaggtcattgggtggatgaagtgagtaaattttgc
tccaaagagtatctcaatcctttgcactataccggacctcccactgaaagagcaagattg
caacaccaggtgaaaaagcacaatctcatagtagcttcatatgatgttgtgcgaaatgac
attgatttcttcagaaatattaagtttaattactgtattcttgatgaaggccatgtaatc
aaaaatggaaaaacaaaattgtcaaaagcagtaaagcagttgactgccaattataggatc
attctttctgggacaccaatccagaataacgttttagagttgtggtcactgtttgacttc
cttatgccaggatttttgggtactgaacgccagtttgcagcgcgttatggcaaaccaatt
ttagcaagtagagatgctcggagttccagtcgagaacaagaggcaggagttcttgcaatg
gaagcactgcaccgtcaagtattaccatttctgttgagaagaatgaaagaggatgtacta
caggatcttccacccaaaattattcaagattattactgtactctcagtcctctacaggtt
cagctttatgaagattttgccaagtctcgtgccaaatgtgatgttgatgaaactgtttca
tctgcttcactgagtgaggagactgaaaggccaaagcttaaagctacaggacatgtgttt
caggcattgcaatatttacgaaaactatgtaaccatccagcattagtgttaacaacccag
catccagaatacaagagaactgcagagcagcttgcagctcataactcatcccttcgagat
atccagcatgcacctaaactgtctgctttaaaacaactactactagactgtggtttggga
aacggtggctcttcagagagtggcacagaagctgttgtggctcagcacaggatacttatc
ttctgtcagctcaagagcatgctggatatagtagaacatgaccttctcaaacctcacttg
ccctctgttacatatttgcgattagatggcagcatacctgctggtcaaaggcattccatt
gtttcaaggtttaataatgacccatccatagatgttcttttgctcaccactcatgttggt
ggactgggacttaacttaacaggagccgacacagtagtatttgtggaacatgactggaac
ccaatgagagatctgcaagcaatggatcgagcgcatcgtattggacagaaacgtgttgtc
aatgtgtatcgcttgataacgagaggaactctggaagagaaaattatgggtctgcagaag
ttcaaaatgaatattgcaaatacagtgattagccaagagaatgcaagcctacaaagcatg
ggaacagatcagcttcttgacctattcactcttgacaaggatgggaaaagtgaaaaagca
gatacttcttcttctgggaaagcctctatgaaagcagttcttgaaaatctgggagaactt
tgggatccagaacagtatgattctgaatacagtctagaaaactttatgcattcactcaag
taa
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