Lepidochelys kempii (Atlantic ridley): 140915945
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Entry
140915945 CDS
T11378
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04510
Focal adhesion
lkp04512
ECM-receptor interaction
lkp04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140915945 (LAMC1)
04518 Integrin signaling
140915945 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140915945 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Laminin_I
Motif
Other DBs
NCBI-GeneID:
140915945
NCBI-ProteinID:
XP_073212722
LinkDB
All DBs
Position
8:54735267..54868833
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AA seq
1693 aa
AA seq
DB search
MCLPACTARAAPTPLWLRLLLLLRPGPFPLCPNSRRAAGAARALAAPRLPPRTQPARAHQ
PSCRRRRVSRPRPLPARAAWVSAAAASRAARRRRSCRPRMGRGALPLLLLLELAGRCAAA
MDECADEASGRPQRCMPEFVNAAFNVTVVATNTCGSPAEEYCVQTGVTGVTKSCHLCDAT
QPHLQHGAAFLTDYNQADTTWWQSQTMLAGVQYPSAINLTLHLGKAFDITYVRLKFHTSR
PESFAIYKRTREDGPWVPYQYYSGSCENTYQKLNRGFIRTGEDEQQALCTDEFSDISPLT
GGNVAFSTLEGRPSAYNFDNSAVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYA
ISDFAVGGRCKCNGHASECVKNDFGKLSCNCKHNTFGEDCEKCLPFYNDRPWRRATAESA
SECLSCNCNGRSRECYFDAELYRSTGHGGHCIGCLDNTDGANCERCRENFYRLGSDEGCL
PCNCNAVGSLSTQCDNYGRCSCKPGVMGDKCDRCQPGFHSLSEAGCRLCSCNPAGSTDDC
SIETGRCTCKDNVEGFHCERCKPGFFNLDPANLRGCTPCFCFGHSSVCTNAVGYSIYSII
SNFQTGEEEWRAEQRDGSEILLQWSVETQDISVISDSYFPIYFIAPDKFLGNQVLSYAQN
LTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLIAQGNSYPSENTVKYAFRLHEATDYPWR
PSLTPFEFQKLLYNLTSIKIRGTYSERSAGYLDDVTIVSARPEPGTPATWVESCTCPAGY
HGQFCEHCAPGYRRETPSLGPYSLCVLCTCNGHSESCDPETGACDCRDNTAGPHCEKCSD
GYYGDATTGISSDCQPCPCPGGSSCAVVPKTKEVVCTNCPAGTTGKRCELCDDGYFGDPL
GENGPARLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLASN
PEVKCKACSCNPYGTVNQQTSCNQVTGQCECLPRVTERDCSACEPGFYNLQSGRGCDRCD
CHPLGSTDGHCDIQTGQCECQPGITGQHCKRCEVNHFGFGPEGCKPCDCDTEGSRSLQCK
EDGRCECKEGFVGSRCDQCEENYFYNRSWPGCQECPACYRLVRDKVAEQRERLQELENLI
ANLGTGDETVTDQAFEDRLKEAERDVMDLLRDAQNSKDVDQDLMDRLKKINSTLASQLGR
LQNIQNTVRETEGLAEQARERVEGTEDLIEVASNMLEKAKMAVANVSITPPDSSGDPNNM
TLLAEEARKLAERHKQEADDIVRIAKAANDTSTEAYTLLLKTLAGENQTASDIDELNRKY
NQAKNISRDLEKQANKVHAEAEEAGNKALQIYANLTSLPAVDSKGLENEANKIKKEAEEL
DQLIDRKLMDYEDLREDMKGKELEVKNLLEKGRTEQQTADQLLARADAAKALAEEAAKKG
RETLEEANDILSNLRDFDKRVNDNKTAAEEALKKIPAITRTIAEANNKTRQAELALGNAA
EDAREAKNKADDAEKIANSVQKNAASTKSEADKTFSDVTELDKEVDDMLKQLQDAEKELK
RKQEDADQDMMMAGMASQAAQEAEDNARKAKNSVNSLLTIINDLLGQLGQLDPVDLNKLN
EIEGTLNTAKDQMKDSDLDRKVAELEDAARRQDEAIQAYNRDIEDILKDINNLEDIKKTL
PSGCFNTPSIEKP
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctcccagcgtgcaccgcgcgcgcagcccccacccccttgtggctccggctcctg
ctcctcctccggccaggcccgttccccctttgcccgaacagccgcagagcagcaggagcc
gcccgagcgttggctgctcctaggctgcctcctcgcacgcagccagcgcgcgcccaccag
cccagctgccgccgccgccgcgtctcgcgcccgcgtccgctcccggcgcgagccgcttgg
gtgtcggctgccgctgcatctcgcgccgcgcgcaggcgtcgctcgtgccggccgaggatg
ggtcgcggggcgctgcccttgctgttgctgctggagctggccgggcgctgcgccgccgcc
atggacgaatgcgcggacgaggcgagcgggcggccgcagcgctgcatgcccgagttcgtg
aacgccgccttcaacgtgactgtggtggccaccaacacatgcggctcgccggccgaggag
tactgcgtgcagaccggcgtgaccggggtcaccaagtcctgccacctgtgcgacgccacc
cagccccacctgcagcacggcgccgccttcctcaccgactacaaccaggccgacaccacc
tggtggcagagccagaccatgctggccggggtgcagtaccccagcgccatcaacctcacc
ctgcacctgggaaaggcctttgacatcacatatgtgcgcctgaagtttcacaccagccgg
cctgagagctttgccatctacaaacgtaccagggaagatgggccgtgggtgccttaccag
tactacagtggctcctgtgagaacacgtatcagaaattaaaccgaggctttatccggact
ggggaggatgaacagcaggcactctgcacagatgagttcagtgacatctctccgctcaca
ggtggcaatgtggctttttcaacactggaggggcgtcccagtgcctacaattttgacaac
agtgctgtgttacaggaatgggtgacggctactgacatccgagtgaccctcaatcgtctg
aacacctttggagatgaagttttcaatgatccaaaagttctcaagtcctattattatgca
atttctgattttgctgtgggtggcaggtgcaagtgcaatggccatgcaagtgagtgtgtg
aagaatgactttgggaagctgtcatgtaactgcaaacacaacacttttggggaagactgc
gagaagtgccttcccttctacaatgaccggccatggagaagagcaacagcagagagtgcc
agtgaatgtttgtcctgtaactgcaatgggcggtcacgggagtgttactttgatgctgaa
ctgtaccgctccacgggccatggtggtcactgcattggctgcttggataacactgatggt
gccaactgtgaaaggtgccgggagaacttctatcgccttggaagtgatgaaggatgtcta
ccgtgtaactgtaacgctgttggctctctcagcactcagtgtgataactacggccggtgc
agctgcaaaccaggtgtgatgggagataaatgtgaccgatgccagccagggttccactcc
ctctcagaggctgggtgcaggctatgttcatgcaatcctgctggtagcacagatgactgc
agtattgaaacagggcgatgtacctgcaaggacaatgtggagggattccactgtgagaga
tgtaaacctggatttttcaatctggatccagccaatctgagaggctgcaccccttgcttc
tgttttggtcactcctcggtctgcaccaatgccgttggctacagtatctacagcatcatc
tccaacttccagactggggaggaagagtggcgtgctgaacagcgagatggctctgaaatt
ttactccagtggagtgtggaaacccaggacatctctgttatctcagacagctatttccct
atctatttcattgcacctgacaagtttttgggcaatcaggttttgagttatgctcaaaat
ctgaccttctcctttcgggtggataggcgggacactcgtctctctgcagaggacctggtg
cttgaaggggcagggcttagagtatctgtgcctcttattgctcagggcaactcctatcct
agtgagaatacagtgaagtatgccttcaggctccatgaagcaacagattacccgtggagg
ccttctcttaccccatttgagtttcagaagctgctttacaacttgacttctatcaagatc
cgtgggacatacagtgagagaagtgctggatacctggatgatgtcactattgtgagtgct
cgtcctgagcctggaacccctgcaacctgggtggagagttgcacctgcccagcaggatac
catgggcaattctgcgagcactgtgccccaggttataggagggagacacctagccttggg
ccatacagtctgtgtgtgctgtgtacctgtaatgggcacagtgagagctgtgacccagag
actggtgcttgcgactgcagagataacactgcaggccctcactgtgagaagtgcagtgat
gggtattacggagatgcaactacaggcatttcctcagactgtcagccatgtccatgtcca
gggggctccagctgcgccgtagtgcccaagactaaggaggtggtgtgcaccaactgtcct
gctggtaccacaggtaaaagatgtgagctgtgtgacgacggctattttggagatccactt
ggtgaaaatggccctgccaggctttgccgtctctgccagtgcagtgacaacattgatccc
aatgccgtggggaactgtaaccgcttgacaggggaatgcctgaaatgcatctacaacacg
gctggcttctactgtgaccggtgcaaagatggtttttttgggaaccccttagcctccaac
cctgaggttaaatgcaaggcgtgcagttgtaatccttatggaacagtgaaccagcagaca
agctgcaatcaagtaactgggcagtgtgagtgcctgccacgtgtcaccgagagggactgt
agtgcctgtgagcctggcttctacaacctacagagtggacgtggctgtgacaggtgcgac
tgccatccgctgggttccaccgatggccattgtgacatacaaacagggcagtgtgagtgt
caaccaggcatcactgggcagcactgcaagagatgtgaggtcaaccacttcggattcgga
cctgaaggctgcaaaccatgtgactgtgacaccgagggctctcgctccctacagtgcaag
gaggatggtcgctgtgagtgtaaggaaggctttgtggggagccgttgtgaccagtgtgaa
gagaattatttctacaatcggtcctggcctggttgtcaagaatgtcctgcatgctataga
ctggttagagataaggtggcagaacaacgcgagaggttgcaggagctggaaaatctaata
gcaaaccttggtactggagatgaaacggtgactgatcaggcttttgaggacagactgaag
gaggcagagagagatgtcatggacttgcttcgagacgcacagaacagcaaagatgtggat
caggacctgatggatcgtctcaagaaaattaacagcactctggcaagccagcttggccga
ttacagaacatccaaaatacagtgagggagactgaaggcctagctgagcaagcccgagag
cgggtggagggcacagaggacctgattgaagtagcttctaatatgctagagaaggcaaag
atggcagttgccaatgtgtccattaccccaccagactccagtggtgacccaaacaacatg
actctcttggcagaagaggctcgtaaactggctgaacgacacaaacaagaagctgatgac
attgtgcgcatagcaaaggcagcaaatgatacatccacagaagcgtatacattgctgttg
aagacactggcaggagagaaccaaactgcaagtgacatagatgagctcaacaggaagtat
aatcaagcaaaaaacatttcacgagacctagagaaacaggctaacaaggtgcatgcagag
gcagaggaagctgggaataaggccctgcagatctatgctaatctcaccagtcttcctgct
gtggactccaaggggctagagaatgaggcaaataagatcaagaaggaggcagaggagctg
gatcagctcattgacaggaagttgatggattatgaggatttgagagaggacatgaaaggg
aaggagttggaagtgaagaatctcttggagaaaggaaggactgaacaacagactgccgac
cagctgctggcccgagcagatgctgccaaagctctggctgaagaagctgccaagaagggg
agagagacactagaggaggccaatgacattctcagcaacctgagagattttgacaagcgt
gtgaatgataacaagacggccgctgaggaggcactgaagaagattcctgccattactcga
accattgctgaggccaataataagacaaggcaagcagagctggctcttggtaatgctgct
gaggatgccagagaagccaagaacaaagcagacgatgctgagaaaattgcaaattctgtc
cagaagaatgctgccagtacaaaatctgaggccgacaagacgttttctgatgtgacagag
ctagacaaagaagtggatgacatgctgaaacagctgcaagatgcagagaaggagctgaag
aggaagcaggaggatgctgatcaggatatgatgatggcaggcatggcttcacaggctgcc
caagaggcagaagacaatgcaagaaaagctaagaactctgttaacagcttgctcaccatc
attaatgaccttctgggacagctagggcaactggacccagtggacttgaacaaactgaat
gagatcgagggtaccctgaacacggccaaagatcagatgaaagatagtgacctggaccgg
aaagtggctgaattggaggatgcagccaggcggcaggacgaagccatacaggcctacaac
agggacattgaggatatcctgaaagacattaacaacctggaagacatcaagaagaccttg
ccgtctggatgtttcaacaccccgtctattgagaaaccctaa
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