Lepidochelys kempii (Atlantic ridley): 140916012
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Entry
140916012 CDS
T11378
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140916012 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lkp03041
]
140916012 (PRPF38B)
Spliceosome [BR:
lkp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
140916012 (PRPF38B)
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Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
140916012
NCBI-ProteinID:
XP_073212935
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Position
8:complement(66539235..66560349)
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AA seq
547 aa
AA seq
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MANNSPALGTGNCQQQQQQAAQHQAGSVPPAQPPLQSGAPKPAASGKQGNVLPLWGNEKT
MNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGG
VRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLW
DWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKT
RPRKIKKDAKEGVEEIDRHAERRRSRSPRRSVSPRRSPRRSRSRSHHREGHGSSSFDREL
ERERERQRLEREAKEKEKERRRSRSTDRALERRRSRSRERHRSRSRSRDRKGDRRDRDRE
REKENERSRKKDRDYDKEKGNERERSRERSKDRKSKGEIEEKRHKDDKDEKKHRDDKKDS
KKDRKHSRSRSRERKHRSRSISKNTGKHSRSRSKEKLSKHKNEGKDKSNKRSRSGSRGRT
DSVERSRKRDHSPSKERSRKRSRSKERSHKHDHSDSKDHSDKHDHRRSQSTERESQEKQH
KNKDETA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatagccccgcgttaggcaccggcaactgccagcagcagcagcagcaggcg
gcccagcaccaggccggatccgtcccgccggctcagccgccgctacagagcggggccccc
aaaccggcggcctcgggcaagcagggcaacgtgctgccgctgtgggggaacgagaagacc
atgaacctgaatcccatgatcctcaccaacatcctctcctcgccctacttcaaggtgcag
ctctacgagctcaagacctaccacgaggtggtggacgagatctacttcaaggttacacat
gttgaaccatgggagaaagggagcagaaaaacagcaggccagacagggatgtgcggaggg
gtgcgaggtgttggaactggtggaattgtgtctacagctttttgcctactttacaaatta
tttactctgaaactcactcgtaagcaagtgatgggcctcataacacatacagattctccg
tacattagggctcttggatttatgtatattaggtacacacagcctcctactgatctatgg
gactggtttgaatcgttccttgatgatgaagaggacctggatgtgaaggcaggtgggggt
tgtgttatgaccattggggagatgcttcgttcctttcttactaagctcgaatggttttca
acattgtttccaagaattcctgtgccagtgcagaaaaatattgatcagcaaataaaaacc
agacctagaaaaatcaagaaggatgccaaggagggagtggaagaaatagatcgacatgca
gagcgtagacgttcaaggtctccaagaaggtctgtgagccccaggaggtctcctagaaga
tccagaagcagaagtcatcatcgggaaggtcatggatcatctagttttgatagagaacta
gaaagggagagagaacggcagagattagaacgtgaagctaaggagaaagaaaaagaaagg
cgaagatcacgaagtactgatcgtgcattagagcggaggcgaagcagaagcagagagaga
cacagaagccgtagtcgaagtcgtgatagaaagggagatagaagagacagggatagagag
cgggagaaagaaaatgaacgaagcaggaaaaaagatagagactatgacaaggaaaagggt
aatgaaagagagagatctagggaacggtcaaaggacaggaaaagtaagggtgaaatagaa
gagaaaagacacaaagatgacaaggatgaaaagaagcacagggatgataagaaagattcc
aaaaaagacagaaaacatagtagaagtcgaagcagggagaggaagcataggagtaggagt
ataagtaagaatacaggtaagcacagtagaagcaggagcaaggagaaattaagtaaacat
aaaaatgaaggtaaagataaatcaaataaacgaagtagaagtggaagcagaggaagaacc
gatagtgttgaaaggtccagaaaacgagaccacagtcccagcaaagagagatcccgaaag
cgtagtagaagcaaagaacgatcccataaacatgatcacagtgatagcaaggaccattca
gacaaacatgatcatcgaaggagccaaagtacagaacgagagagccaagaaaagcaacat
aaaaacaaagatgaaactgcgtga
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