KEGG   Lepidochelys kempii (Atlantic ridley): 140916384
Entry
140916384         CDS       T11378                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lkp  Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:lkp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lkp03036]
    140916384 (KDM4A)
Enzymes [BR:lkp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     140916384 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     140916384 (KDM4A)
Chromosome and associated proteins [BR:lkp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    140916384 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD DUF7141 LBR_tudor Tudor_5 DUF4537
Other DBs
NCBI-GeneID: 140916384
NCBI-ProteinID: XP_073214078
LinkDB
Position
8:complement(107221246..107260028)
AA seq 1062 aa
MAAELESLNPGARILTFRPTAAQFRDFGRYVAYIEARGAHRAGLAKVIPPKEWKPRTCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYEKHVHEWNIGKLNTILDVVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTAIDHTLPTPEAAEFFKGELFQ
KVKNGKQCSEEIETGEACKEDVDMDEKKSLPKHRIGTKRHRVCLEVPQEVSQSEAFPKEE
LSSVQYEVEVAEPPVRPSSELVQQGEDGLPVSDYVDSSEVKFEELKNVKLEEEEEEEEEQ
EAAALDLSIPHSISSTSALTASKPSSAFSLQSSSPAYSSTSDSESAELLPRRTLGQAGVL
TVHSYAKGDANGADSEHASGKKASITASVNEQELAEVAAEYLRSMKESKKSKGRRQPLSK
LPRHHPLVVKDCISDDEMSEHLTPEEEAEETEAWAKPLSQLWQNRPQNFEAEKEYNQTMA
QQPPHCAVCMLFQTYQVECGGHGQSSGVAPSTATRKVRTKPLIPEMCFTATGCSTDLNLS
TPYLEEDGTSVLITCKNCSVCVHASCYGVSPDKATEDWMCSRCTANALEEDCCLCSLRGG
ALQRANDDKWVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGC
CVQCSHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPSQAERAKAALQDLSAG
QMVISKHKNGRFYQCEVVSLTKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEV
VQVRWTDGQVYGAKFVASHAIQMYQVEFEDGSQLMAKRDDVYTLDEELPKRVKSRLSVAS
DMRFTEIFTEKEVKQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3189 nt   +upstreamnt  +downstreamnt
atggccgccgagctggagagcctgaaccccggcgcccgcatcctgaccttccgccccacc
gccgcgcagttccgcgacttcggccgctacgtcgcctacatcgaggcccgcggcgcccac
cgggccgggctcgccaaggtaattcccccaaaggaatggaaaccgcgaacatgctatgat
gatattgatgaactggtcatcccagctccaattcagcaggtggtgactggacagtctggc
ctcttcacacagtacaacatccagaagaaggctatgactgtccgggaatttcgaagaatt
gcaaatagtgacaagtactgcacaccccgatataccgactttgaggaccttgagcggaaa
tactggaagaacctcactttcaatgcccccatctatggtgctgatgttaatggcacgctc
tatgagaagcatgtacatgagtggaatattggcaagttgaacacaatcctggacgtagtg
gagaatgaaagtggcataaccatcgagggagtgaatactccttacctctacttcggcatg
tggaaaacctcctttgcctggcatactgaggacatggacctttatagtattaattacttg
cactttggagaacccaagtcatggtattccatccctccagagcatgggaagcgactggag
cgacttgccaaaggcttctttccaggaagtgcccagagttgtgaagcttttctccgtcac
aagatgaccctcatctctccattgatattgaagaaatatggcatcccatttgataaggtg
acacaggaagctggagaattcatgataacattcccttatggttatcatgctggctttaat
catgggtttaattgtgctgaatctaccaactttgctacgcttcggtggattgaatatgga
aagcagtctgtgttatgctcatgtcggaaggatatggtgaagatctccatggatgttttt
gtgaggaaataccagccagatcgctacaagctctggaaagctgggaaagatgtgactgcc
attgaccacacacttcccacaccagaggcagcagagttcttcaagggggagctcttccag
aaagtcaagaatgggaagcagtgcagtgaggaaatagaaactggggaggcatgtaaagag
gatgtggacatggatgagaagaagagtctgcccaagcatcgcataggaaccaagaggcac
agggtctgcctcgaggtgccacaagaggtgagtcagagcgaagcctttcctaaggaggag
ctgagctctgtgcagtatgaggtggaagtggcagagcctcctgtcagaccctctagtgag
cttgtgcagcagggtgaagatggactcccagtttcagattatgtggattcttcagaagtc
aaatttgaagaactgaaaaatgtgaaactggaagaggaggaggaggaggaggaagagcaa
gaggcagctgcgctggatctttccattcctcattcaatcagttccacctcagccctcact
gcttctaagccgagttcagctttcagccttcagtccagctctccagcatattcttctact
tcagactctgagtcagctgaactcttgcccagaagaactcttggccaagctggggttctt
actgtccatagctatgctaaaggagatgccaatggggctgacagtgaacatgcctcaggg
aagaaagccagcattacagccagtgtgaatgaacaggaacttgcagaggtggcagcggag
tacctgagatcaatgaaagagagtaaaaagtcaaagggtcgtcgccagcccttgagcaaa
cttcctcgtcatcatcctcttgtggttaaagactgcatcagtgatgatgagatgtcagag
cacctaactcctgaagaagaggctgaggagacagaggcttgggccaaaccacttagccag
ctgtggcaaaatcgccctcagaattttgaggcagagaaagaatataatcagaccatggct
cagcagccccctcactgtgctgtatgcatgctcttccagacataccaggtagaatgtgga
ggccatggtcagagctctggagttgctccaagtactgccaccaggaaggtacgaaccaaa
cctctgattcctgagatgtgcttcactgcaactggctgcagcactgacctcaatctgtca
accccttacctggaggaagatggaactagtgtcctgatcacctgcaaaaactgcagtgtc
tgtgttcatgctagttgttatggtgtgtcccctgacaaggccactgaagactggatgtgc
tccaggtgtacagccaatgctttagaagaggactgctgcttgtgttcattacgaggaggc
gcactgcagagagccaatgacgacaagtgggtccatgtgatgtgtgctgtagctgtactg
gaggcaaaatttgtgaatattgcagagcgcagtccagtggatgttggcaaaatccctctg
cagcgcttcagactgaaatgcatcttctgtaagaagcggaggaagagaattgcaggttgc
tgtgtgcagtgctctcatggtcgctgtcctacgtcctttcatgtcagctgtgctcaagca
gctggagtcatgatgcagcctgatgactggccattcgttgtcttcattacctgctttagg
cataagattccatcccaggcagagcgagctaaagctgctcttcaagatctctcagctggg
caaatggtaatcagcaagcacaagaacggtcgtttctatcagtgcgaagtggtcagtctt
acaaaggaaaccttctatgaagtcaactttgatgatggctccttcagcgacaacctctat
ccagaggacattgtgagtcgagactgtcttcagctgggtcctcctgctgaaggagaggtc
gtgcaagtcagatggacagatgggcaagtttatggagccaaatttgtggcatcacatgcc
atccagatgtaccaggtggaatttgaagatggatcccagctgatggcgaagagagatgat
gtgtacactcttgatgaggagcttccaaagagagtcaaatcaaggctgtcagtagcttca
gatatgcgcttcacagaaatcttcacagagaaggaggtcaaacaagagcggaagagacaa
agagtgatcaactcacgctatcgggaggattacattgaacctgcactgtaccgggccatc
atggagtaa

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