Lepidochelys kempii (Atlantic ridley): 140917124
Help
Entry
140917124 CDS
T11378
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03030
DNA replication
lkp03410
Base excision repair
lkp03420
Nucleotide excision repair
lkp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140917124 (RFC4)
03410 Base excision repair
140917124 (RFC4)
03420 Nucleotide excision repair
140917124 (RFC4)
03430 Mismatch repair
140917124 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lkp03032
]
140917124 (RFC4)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140917124 (RFC4)
03400 DNA repair and recombination proteins [BR:
lkp03400
]
140917124 (RFC4)
DNA replication proteins [BR:
lkp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140917124 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
140917124 (RFC4)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140917124 (RFC4)
DNA repair and recombination proteins [BR:
lkp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140917124 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
140917124 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_lid_RFC1
AAA_assoc_2
AAA_11
AAA_22
AAA_16
AAA_30
DUF815
AAA_28
Mg_chelatase
AAA_14
RuvB_N
SLFN-g3_helicase
AAA_5
AAA_19
AAA_24
AAA_23
AAA_3
ResIII
bpMoxR
DNAX_ATPase_lid
AAA_7
ABC_tran
nSTAND3
RNA_helicase
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
140917124
NCBI-ProteinID:
XP_073215347
LinkDB
All DBs
Position
9:complement(9213680..9242064)
Genome browser
AA seq
365 aa
AA seq
DB search
MQAFLKGPSAISTRAPASKERGAAPAAGGSGEGKRLKPIPWVEKYRPKCVDEVAFQEEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILALARELYGPELFRQRVLELNASDERGIQVI
REKVKIFAQLTVSGSRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLTDKIQQQRLLAVSEKENVKVSNEAVSCLVKVSEGDLR
KAITFLQSATRLTGGKEISEKVVTEIAGVVPKETIDGLLSACQSGSFEKLETVAKNLINE
GYAVAQLINQLHDDIVEREDLPDQQKSVIAEKLAEVDKCLTDGADEYLQLISLCAVVMQQ
LTQNG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttctgaaaggcccgtccgccatcagcaccagagcgccggcgtccaaggag
cgaggcgcggctcccgccgcgggaggcagcggcgagggcaagcggctcaaacccatccct
tgggtggagaaatatcgtccgaagtgtgtggatgaagttgcattccaagaggaagttgtt
gctgtgctgaaaaaatccttagagggagctgatcttcccaatctcttgttttatggccca
cctggaactggaaagacttccactattttggcattagccagagaactctatggacctgaa
ttgttccgacagagagttcttgagttaaatgcttctgatgaacgtggaatacaagtgatt
cgagagaaagtgaagatatttgctcagctaactgtgtctggaagtcgttcagatggtaag
gtttgtcctccttttaagattgtgatcctggatgaagcagactctatgacttcagcagct
caggcagccttgagacgcactatggagaaagaatcaaaaacgacacgtttctgccttatt
tgtaattacatcagcaggataattgaacctttaacatctcgatgctccaaattccgtttc
aagcccctgacagataaaatccaacagcagagactactggctgtttccgaaaaggaaaat
gtgaaagttagcaatgaggcagtatcttgtcttgttaaagtgtcagaaggagacttaaga
aaagcaatcacatttcttcaaagtgctactcgattaacaggtgggaaagagatctcggag
aaggttgtcaccgaaattgcaggggttgtccctaaggaaacaattgatggactactatct
gcctgtcaaagtggctcttttgaaaaactggaaactgtagcaaagaatctgataaatgaa
gggtatgctgttgctcagcttataaaccaacttcatgatgatattgttgagagagaggat
ctccctgaccagcagaaatctgttattgcagagaagcttgctgaggtagacaaatgcttg
acggatggtgcagacgagtacttgcaattgatcagtctctgtgctgttgtgatgcagcag
ctaactcagaatggctag
DBGET
integrated database retrieval system
