Lepidochelys kempii (Atlantic ridley): 140917479
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Entry
140917479 CDS
T11378
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04136
Autophagy - other
lkp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140917479 (ATG4B)
04136 Autophagy - other
140917479 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lkp01002
]
140917479 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140917479 (ATG4B)
03029 Mitochondrial biogenesis [BR:
lkp03029
]
140917479 (ATG4B)
Peptidases and inhibitors [BR:
lkp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
140917479 (ATG4B)
Membrane trafficking [BR:
lkp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
140917479 (ATG4B)
Mitochondrial biogenesis [BR:
lkp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
140917479 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140917479
NCBI-ProteinID:
XP_073216521
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Position
9:complement(54848960..54894240)
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AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFEYEDFPETKDPVWILGRTYSVFTEKEEILLDVTSRFWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWVKGKRQTDNYFNILNAFIDKKDS
YYSVHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFDTWSSLAVHIAMDNTVVMEEIRR
LCKSNFLCAGAAAFPAAESDLFYNGYPDGAEVTDRLSLWKPLVLLIPLRLGLTDINEAYI
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPSDNSCIPDESFH
CQHPPCRMSIAELDPSIAVGFFCNTEEDFNDWCQEIKKLSLLKGVLPMFELVEHQPSHFS
SPDVLNLTPDSSDADRLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctactctgacctatgatactctcaggtttgagtatgaagacttccctgag
accaaagaccctgtttggatactggggagaacatacagtgtgttcacagagaaggaggag
atcctgttggatgtgacctctcggttttggttcacatacagaaagaactttcctgccatt
ggaggaacaggtcccacatctgataccggctggggctgcatgttgaggtgtggtcagatg
atcttcgcacaggcattggtctgccggcacttaggcagagattggaggtgggtgaaaggg
aagaggcagacggataattacttcaacatacttaatgccttcattgacaaaaaagacagc
tactactccgtccaccagatagcccagatgggagttggagagggcaaatcgataggccag
tggtacggaccaaacacagttgcacaagtgctcaaaaaacttgcaacttttgatacatgg
agctcattggcagtgcacatagccatggacaacactgtagtgatggaagagatcagaagg
ttatgcaagtccaatttcttgtgtgctggggctgcagcattccctgctgcagagtcagac
ctgttctataatgggtacccggatggagcagaggttacagataggttgtcgctatggaaa
ccattggtgctgctgatacctcttcgccttgggctcacggatatcaatgaagcttatatt
gaaacactaaagcactgtttcatgatgcctcagtccctgggagtgattggagggaaaccc
aacagtgctcattacttcattggctatgtaggtgaggagctaatttacttggacccccac
actacacagcctgcagtggaacccagtgataacagctgtatccctgatgagagcttccac
tgccagcacccgccctgccgaatgagcattgctgaactcgacccatccatcgcagtgggc
tttttctgcaacacagaggaagactttaatgactggtgccaggaaatcaaaaagctgtcc
ctgctaaaaggagttctgccaatgtttgaactggtagaacatcagccttcacacttctcc
agccctgatgttctgaatctcacaccagactcttctgatgcagacaggttggaaagattc
tttgactctgaggatgaagactttgaaattttatctctttga
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