Lepidochelys kempii (Atlantic ridley): 140917618
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Entry
140917618 CDS
T11378
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140917618 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140917618 (CSTF2)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
140917618 (CSTF2)
U7-dependent histone pre-mRNA processing factors
140917618 (CSTF2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
140917618
NCBI-ProteinID:
XP_073216930
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Position
9:complement(65015822..65070746)
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AA seq
601 aa
AA seq
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MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPIN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNPQPVPGPGPGPGPGPGPGPNAQMNQQNPPSSQPQPI
GGMHVNGAPPLMQPPMQGGVPAPGQMPASVAGPGPGPLAPGGGMQPQVGMPGGGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGPPMHHMPGHDNRGPPPHEMRGGPMGEPRPLMGEPRGPLMDA
RGGRDPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGPG
PNPRGPMPGGIQGPGPLNLGASGPQGPRQVPNMPGAGIQGGGMPGAGIQAGGMPGAVVQG
AGQPGGFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGA
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggcggtgcgggaccccgcggtggatcgctcgctgcgctccgtgttcgtg
gggaatattccatacgaagccacagaggagcagctaaaggacattttctcagaggtcgga
cctgttgtcagtttcaggttggtgtatgacagggagacaggcaaaccaaagggatatggc
ttttgtgaataccaagaccaggagacagcgctcagcgccatgcggaacctgaatgggcgt
gagttcagcgggagggcgttgcgtgtggacaacgcagccagtgagaagaataaggaggag
ctgaagagcctgggcacaggtgcccctatcatagagtcaccatatggagaccctataaat
cctgaagacgcccctgagtctatcagcagggcagttgccagcctgccacctgagcagatg
tttgagctgatgaagcagatgaagttgtgtgtgcagaacagccctcaggaggcacggaac
atgctgctccagaaccctcagctggcatatgccctgctgcaggcccaagtggtgatgagg
atcgtcgatccagagattgctctgaaaattctgcatcgtcagaccagtgttccacctctg
attccaggcaacccacagccagttcctgggcctggacctgggcccgggcccgggcctggt
ccaggtcctaatgcacagatgaaccagcagaatcccccatcgtcccagccacagcccata
ggtggcatgcatgtaaatggagctcctcctctgatgcagcctcctatgcagggtggagtg
ccagccccaggacagatgccagcctccgtagccggcccaggccccggccccttggctcct
ggaggtggaatgcagcctcaggtcgggatgccgggaggtggaccagtgcccttggaacgt
ggacaaggaaacctgcagctctcgcccgtgggacctgccaggcctgcatctatcgagcga
gttcaagtgcccatgccagacccgagggcccctatgcagcgtggaccattacctgctagc
ggcccacctccccggggccttctgggagatgctccaaatgacccacgtggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccaccacaccaaggtcca
cccatgcaccatatgcccggccatgacaatcgtggtccacccccacatgaaatgagggga
ggaccaatgggagaacccaggccactgatgggagaacctagagggcctttgatggatgct
cgaggtggaagagatcccaggggcatggagccgagagggatggagcccaggggcatggag
cccaggggcatggagcccaggggcatggagcccaggggcatggagccgagaggcatggag
cccaggggcatggagccgagaggcatggagcccaggggcatggagcccaggggccctggc
cccaacccaaggggcccaatgcctggtggaattcaaggacctgggccacttaacttggga
gcaagtggccctcagggacctagacaggttcccaacatgccaggggcaggcatacaagga
ggtggcatgccaggggcaggcatacaagcaggaggcatgccaggggcggtggtacaagga
gctggccagccaggtggctttagccctgggcagaaccaggtcaccccccaagatcacgag
aaggctgccctgatcatgcaggttctccagctaactgcagaccagatcgccatgctgcct
ccagagcaaaggcaaagcatccttatcctaaaggagcagatccagaaatccactggggct
ccataa
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