Lepidochelys kempii (Atlantic ridley): 140918123
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Entry
140918123 CDS
T11378
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140918123 (RAI1)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
140918123 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
140918123
NCBI-ProteinID:
XP_073217938
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All DBs
Position
10:complement(7704589..7838403)
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AA seq
1908 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQQTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPG
YENSAAEKYHRGNKQLPGQQLQGRPAFSNYAVQENSPYPARYSGEESLQTWGAQQQSLAG
GVAKYEENLMKKSPAPAGSRQYHEQTAQLPFRTHSLHLPQQPQPPALTYPKLQRQKIQND
VSSPMSFSQTSHFTQHSQSQFPASSTYSSVPGGSQAAHSYKSCIAPSSQQHERPLGGAAN
LASGQRVQNLHGYQANRISYDQQQQQQQPPLQGRHHAQETLHYQNLAKYQHYNQPGQTYC
QTDAPVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQSLSTGSF
AAGITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLQKEKIPENLLSDLSLQSLTALTSQVE
NISNTVQQLLLSKSAVPQKKGIKNPPRTPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTP
QSVHAEAQDADYLSGSEDQLERNFLYCSQSRSPARVNSNSKAKPESVSTCSVTSPDDMST
KSDDSFQSIHANLPLETFTKYMTNERECPRLLLSALSQEELASEIIVLQDAINEKADKAW
ANSPTLNKDPAKSPFHVENHRTGLDSMVKSTWSNHGDSGTHTEPLKLNKASGGNNSKDFS
EEVYENAQVEFTTTETKNALKVTSSLAYNSKPSIPAATSSSEAASYSCYSNTTANSVGSE
NTMEHFDWPDESISESCLRWKELGPCLQSSDLSKGLFHSKLAGSCKEKKNVCCMDICDGE
QSAKNEQAEDFSQQQMGEEDTLTYDEATKADSERWLEDTRHCCSGGDFSEIPMISSPDLK
ESDLEPEEYSSLCELASSEQKSVIYDTSPPKPPENAAVLSSKDVPVSAEETVSTVEKEDS
APSSRLSGQSVILLGPAVGTETKVKSWFESSLPHIKPEEDTTVGESVLQEKTETETTLSV
KVKKQILPENLLAKSESISRGKTLRSKRVHSRLSEGEESSKPVPSPFKDIQAAGMVANTR
VEPDGQMETTSKNAHGQTPRFPTEGLPARMCTRSFTALSEPRTPAPLEGLKVLPHQEKLG
KKPVCGMKQRVAFKARKRTGRPAPKVVQNPSEPTSLLVPNLVQNEDFIGQKAKGLEPQDA
EVKDQRSMILRSRTKTQEAYTKRRREKRTADVRLKNCKTPKKLLSNNHLPPTFKITPPGG
PHKEGKVGKRMKLSKSGPGTGSKLSERPLHSLKRKSTFVSPIPTKKRNLVLRSSSSSAKE
EKPEASPNLFKRMPSTKKARAKLPTKSSCEAALTPPPAKEPPNVCIKITSRAAFQGAMKT
KVLPPRKGRGLKLEAIVQKITSPNLKKFACKTAAATAHSNPLSPAGVEKERALKNASVTP
AVGEAGPLNQGMAQKAPAASVAEQLCRNSNNRPLKGKLMNSKKLSSDCFKGEAYSSPETA
QHNGSSMAAKSISLLPKKRNRKGKAAAFSVAKNPLDRRAHLAPALLLMARERAGAGDALG
NGEDGQRDGKKPKTEDKDLAKNEPPEGRSSQTQTRVQKQRANHSSYNGYSKRQRKRHTRS
KAKNVAARCKSRAKRQQQAPLLNPAEPEIRLKYISCKRLRTDSRAPPFSPYVRVEKRNEF
TTTCTVINSAGEEARLHKEQQPSSSAQALLPGGASLQPKAALPLSSAMHLGPVVSKALNA
ACLVCCLCRNPANYKDLGDLCGPYYPEHCLPKKKSRLKDKIKVEGPSEEAPVPSPAERTL
KTTDNNCTTSTISGKPPRLDSAADSAKQSALRSSSRGMFRKLQSCYCCDERTEGEEAAEK
PRRHECNKAESPSQEPVGDTQEHWVHEACAIWTAGVYLVAGKLYGLQEAIKVAAEVRCSS
CQQAGATIGCCHKGCAQTYHYACAIDTGCSLTEENFSLKCPKHKRQLL
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagaactaccagcagact
tcacaagacacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcgtcagaggctggtggcgaaggagtactacagtcagcagcagctgccttacccaggg
tacgagaacagcgccgcggagaaatatcacaggggaaataagcaattgcctggccagcag
ctgcaaggccggccggccttttcgaattacgcagtccaagagaacagcccgtacccggcc
cgctattctggggaggagagcctgcagacctggggagctcagcagcaatccttagctgga
ggagtggcgaagtatgaggaaaacttgatgaaaaagagcccggctcccgccggcagcagg
cagtaccacgagcaaacggctcagcttccgttccgaactcattccttgcacctgccgcag
cagccgcagccgcctgccttgacatatcccaagctgcaaaggcagaagatccaaaatgac
gtctcctcacccatgtccttttcccagaccagccacttcacccagcactcccagtcccag
ttcccagcctcttcgacgtactcctccgtcccaggagggagccaggcagctcattcgtat
aaaagctgcatcgcgccctccagccaacagcacgagcggcctcttggaggtgctgcgaac
ctggcatctgggcagcgagtacagaacctgcacggctatcaggcaaaccgaattagctac
gaccagcagcagcagcaacaacagccgcccttgcaaggaaggcatcatgcccaggaaaca
cttcactatcaaaacctagcaaagtaccaacattataaccagccaggccagacctattgc
cagactgatgctcctgtgaggacgccagagcaatattaccagacatttagtcctagctca
agtcattctccagctcgttctgttggtaggtctccatcctatagctccactccatctcct
ctgatgccaaacctggagaatttccaatacagccagcaatctctcagcacagggtctttc
gctgccggcatcactgaccacagccatttcatgcctttattgaatccttctccaacagat
gggacgagtccagatgctcagtctgggaactgcaaaaacttgcagaaggagaagatccct
gaaaacctcctgtctgatctcagtttgcaaagtctaactgcgctcacctcgcaagtcgag
aatatttccaacactgtccagcagcttctcctttcaaaatcagcagtgccccagaaaaaa
ggcatcaaaaaccctcctaggaccccagaacagctcaaaggccaacactgtagtccagag
agcagcacgtattctgccgagcaggtaggcacccccctatcggacccccttagcacccct
cagtcagtacatgctgaagctcaggatgccgattatctgagcgggtctgaagatcaacta
gagagaaatttcctttattgcagtcaaagccgcagtccagcaagggtcaacagcaactcc
aaggccaagcccgagtcggtctctacctgctcagtgacttctccagacgacatgtccacg
aagtccgatgattctttccagagtattcatgctaacctgcccttggaaacattcaccaag
tacatgaccaatgaaagggagtgcccaaggctgcttctgagtgcgctgtctcaggaggag
ctggcttccgaaatcattgtgctacaggacgctatcaacgagaaggcagacaaagcctgg
gccaactcccccactttaaacaaagaccctgcaaaatcccccttccatgtagaaaatcac
agaacgggtctggactcaatggttaagagcacatggtccaaccacggtgactcgggtaca
cacaccgaacccctgaaattaaacaaagcctctgggggaaacaacagtaaggatttcagc
gaagaggtttatgagaatgcccaagtggagtttacaacaactgaaacaaagaatgctctt
aaagtcaccagttccctggcgtataattccaaacccagtatcccagctgctacttccagt
tctgaggccgccagttacagctgctattcaaacaccacggccaactcagtgggttccgaa
aacaccatggagcattttgactggccagatgaaagcatcagtgaatcatgcctgaggtgg
aaggagcttgggccatgtctacaatcatcagatctttccaagggtttgttccacagcaaa
ttggctgggtcttgcaaagagaaaaaaaatgtctgctgcatggatatatgtgacggtgaa
caatcagccaagaatgaacaagccgaggacttcagccagcagcagatgggggaggaagac
actttgacgtatgatgaggccaccaaagcagatagtgagaggtggctggaggataccagg
cactgctgttcaggtggggacttcagcgaaatcccgatgatatcatctccagatctgaag
gagtctgatttggaaccagaagaatattcatctctgtgtgagctggctagttcagagcag
aagtctgtgatctacgatacatccccacctaaacctcctgagaatgctgcggtgctctcc
tccaaggatgtgccggtatcagcagaagaaactgtaagcacagtggagaaagaagattca
gctccctcctctcgtttgtctggacagtctgttatcctcttgggcccggcagttggcact
gaaaccaaggtgaaaagttggtttgaatcttctctgcctcacataaaacctgaggaggac
acaacagtaggtgaaagcgtcctccaggagaagacagagaccgaaacgaccttgtccgtt
aaggtaaagaagcaaatactaccagaaaatttgctggcaaaatcagagtcgatctcgagg
ggcaagactcttcgcagcaagagggtccattccaggttgtcagaaggagaggaatccagc
aaaccagtaccaagccctttcaaagacatccaggcagctggcatggtggccaacacacgt
gtagagccagatggccagatggaaacaacaagcaaaaatgcccatggccagactcctagg
tttccaactgaaggcttgccagctcggatgtgtacccgctctttcactgccttgagtgag
cccaggacgccagccccactggaaggactgaaggtgttgccccatcaagaaaagttaggg
aagaaaccagtttgtggcatgaagcagagagttgctttcaaagccaggaaacgcactgga
agaccggccccaaaagttgttcaaaatcccagtgaacccacttctctcctggtcccaaac
ttggtgcagaacgaggactttattggccaaaaggctaaaggcctagagccccaagacgca
gaggtgaaggaccagagatccatgatcctgcggtctaggaccaagacacaggaggcctac
acaaaaaggagaagggagaagaggactgcagatgtcaggctcaaaaactgtaaaacaccc
aagaagctcctttcaaacaaccatctaccccccaccttcaagatcacacccccagggggg
ccacacaaagaagggaaggtgggcaaaagaatgaaactctccaaatccgggcctggaacg
ggcagcaaactgtctgagcggccgctgcattcgctgaagagaaaatccaccttcgtgtcc
cctatccctaccaaaaagagaaatttagttttaaggagcagcagcagcagcgcaaaagag
gagaagcccgaagcctcccccaatctctttaaaaggatgccgtcaaccaaaaaggcgaga
gctaaactgcccacaaagagctcctgcgaagcagccttgacgccccctccagctaaagaa
ccccccaacgtctgtattaaaatcacctctcgggcggcatttcagggggccatgaagaca
aaagtgctgcccccgaggaaaggcaggggcctgaagctggaggccattgtgcagaagatc
acctcaccgaatttaaagaagtttgcatgcaaaacggccgccgctactgcacacagtaat
cctctgagccctgccggcgtggagaaggagcgggccttaaagaatgcaagtgtaacccca
gcggtgggagaagcggggccattaaaccagggcatggcacaaaaggctcctgccgcttca
gtagcagagcaattatgcagaaattcgaacaacagacccttaaaaggaaaactaatgaac
agtaagaaactgtcctctgactgtttcaagggtgaggcctattcatctcccgagacagcg
cagcacaacggcagcagcatggctgcgaagagcatcagcctgctgcccaagaagaggaac
cgaaaagggaaagcagcagccttcagcgtggccaaaaaccccttggacaggcgggcgcat
ctcgcccctgctctgcttctgatggccagagagcgggcaggcgcaggggacgcgctgggg
aacggggaagacggacaacgggacgggaagaagccgaagaccgaggacaaagacttggcc
aagaatgaaccccccgaggggagaagctcccagacccaaacccgggtgcagaagcagcga
gcgaaccactccagctacaatggctactccaagagacaaaggaaacggcacacccgcagc
aaggccaagaacgtggccgccaggtgtaaaagcagggcgaagcggcagcagcaggcccca
ctgcttaaccccgcggagcccgaaatcaggctcaagtacatctcgtgcaagcggctgcgg
acggacagccgagcgccgcccttctccccctacgtgcgggtggagaagcgcaacgagttc
accaccacctgcaccgtcatcaactcagccggggaggaggccaggctccacaaggagcag
cagccttcgtcctcggcccaggccctgcttcccggcggggcctccctgcagcccaaagcg
gcgctgcctttatcttccgcaatgcacctgggcccagtggtgtccaaggccctcaacgca
gcctgtctggtctgctgcctctgccggaacccagccaattacaaagacctgggggatctc
tgcgggccgtattacccggagcactgcttgccgaaaaagaaatcaaggctgaaagacaag
attaaagtggaggggccgagcgaagaggctcccgtgccttcgccggcagagagaacgctc
aaaacgacagataataattgtacaacgagtacaatcagtgggaagccgccaaggctggac
agtgctgctgactcagcgaaacagagcgctctccggtcgagttccagggggatgtttagg
aaactacaaagctgttactgctgtgatgagaggacagagggagaggaggcggcagagaag
cccagacggcatgagtgcaacaaagccgagtccccgtctcaggagccagtgggagacacg
caggagcactgggttcacgaagcctgtgctatatggaccgctggggtttacctggttgca
gggaagctgtatgggctacaggaggcgataaaggtggctgctgaagtgagatgctctagt
tgccaacaagcaggagcaaccattgggtgctgccacaagggatgtgcccaaacctatcat
tacgcatgtgccatcgacacaggttgctcattaactgaagagaacttctctctgaaatgt
cccaaacataagaggcagctgttataa
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