Lepidochelys kempii (Atlantic ridley): 140918141
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Entry
140918141 CDS
T11378
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140918141 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkp03021
]
140918141 (CPSF4)
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140918141 (CPSF4)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140918141 (CPSF4)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140918141 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_12
zf-CCCH_2
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
140918141
NCBI-ProteinID:
XP_073217990
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All DBs
Position
10:complement(9024062..9031949)
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AA seq
283 aa
AA seq
DB search
MQELIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLRAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPP
LPQPTQPQQKSSFCCCHLPSAERANAWPVVTVPFRGLSGRWALCKHEAVHLSSATLTSTS
PKITVYCSVIPWSQSTTMLHSISSTSVFSLFQEPSARLKKKSA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgccagcgtggaccacatcaagttcgacctggagatcgcggtggag
cagcagctgggggcgcagccgctgcccttccccggcatggacaaatcaggtgctgctgtc
tgtgaattttttttaagagctgcttgtggaaaaggaggcatgtgtcctttccgacacatc
agtggagaaaagacagttgtttgcaaacactggctccgagggctgtgcaagaagggagac
cagtgcgaattcctgcatgagtatgacatgaccaagatgcctgagtgttatttctactcc
aaatttggagagtgcagtaacaaagagtgtccgtttttgcacattgacccggagtctaag
atcaaagactgcccctggtatgacagaggcttctgtaaacacggtcccctctgcagacac
agacacactcgaagagtcatttgtgtgaattacctggtgggattctgtccagaggggcct
gcttgtaaattcatgcatcctcgatttgaactgcctatgggaaccacagagcaaccacca
ctgcctcagccgacacaaccccagcaaaagtcatcattctgctgctgccaccttccttca
gctgagagggcaaatgcatggccagtagtgacagttcctttccgtggactgtctggaagg
tgggcactgtgtaagcatgaagcagtgcacctgagctctgctacactgacaagcacaagt
cctaagatcactgtatattgcagtgtaatcccttggtcacagagcactaccatgttacat
agtatatcatctacatctgtgttttctttattccaagaaccatctgccagattaaaaaaa
aaatctgcttga
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