Lepidochelys kempii (Atlantic ridley): 140918228
Help
Entry
140918228 CDS
T11378
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lkp01002
]
140918228 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lkp04121
]
140918228 (USP42)
Enzymes [BR:
lkp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140918228 (USP42)
Peptidases and inhibitors [BR:
lkp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140918228 (USP42)
Ubiquitin system [BR:
lkp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140918228 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
140918228
NCBI-ProteinID:
XP_073218240
LinkDB
All DBs
Position
10:16092274..16134379
Genome browser
AA seq
1402 aa
AA seq
DB search
MTIVDKVSESSNPAACQKQPCSSVVPSTGDMDSASASWGAVSSLEVPKHKITLGPVPGAA
VYSSSSVPDKSKPSAQKDQSIGDGIAPPQKVLFPAEKICLKWQQTHRVGAGLQNLGNTCF
LNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQAHITQALSNSGNVIKPMAVIN
DLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSNKLDRHTQATTLIYQIFGGYLRSR
VKCMNCKGVSDTFDPYLDITLEIKTAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVPAS
KRFTIHRSSNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFSCHAGHYYCYIKASNGQWYQMNDSIVSNSDIRSVLNQQAYVLFYIRSHDMKNGGEH
PHSIHTPGQSSPRPVISQRVVNSRQGASGFIGPQLPPHMIKSSSHLNGTGSLKETPSSSV
ASASNVTLNRPASAPPSTSIQNWTINRPIIPDPSKKQKITISIHNNKLPTRQTLSQPNLH
NSLENLSKPVPSSTITNSSAVKSTSNAPTMSVATKVSKQTAPSDSCSKPLMNGKSKLNSS
TLVPYGAESSEESDEESKGLVKENGHSKSFNGILIGNVVSTLQNSCSSCQDAEEAVSQHE
LPKNVTVNGAISIDSDPEENGLKFEEATCQVKPVKSTEIPFSKVNGLHGKIIPTALPPVP
EDRILESFRYNQLKSLSEEISATGLEKTSENDGPVETLVSGSNTVSYEKSSKVPANLSCN
VQNPFTTSDPETISTKEEIAESIVSKTDHAHSDISGQCNTMKISLGIDDEFSEQCDPKDY
ADKIRGTQEVKMTLKESPLHIRGSAETAEKLGQSPFIKSDNECSSKKLAALNIIDKCQET
KESANNYTDVPPTNDSSATRLDKVLESHSKENDGLDGNEICEENKDRQKLKSHSPIKEKN
CTPKKIDKGHYRTKRERSESEEQEKQTKSKPDDDYSKKRQSYSKESTKQDRYKQEHCNGN
KYKLMHSERNSPDNGRSLGKYTHYRSRSRGKTDQERSRYYHSKRERSWSRERYYQDMPRR
WDKCRYYNDYPSYAARDGRDRKFFHGDRDYDKSSQVYNSRSYRDYYYTSRWNHEPVAKER
EKHHFGSSKIDLYNCSALSQHSEKYSHEKCASISEENSSSFETSCHKYEYLKDRKRKCAS
LEGSDSDMEKKQRRSLQSEPTEEQKVKKHKKSKKKKKSKDKHREKDDRHHQDSDFSGACS
DSDIHKHKKKKKKKKKHTKKSEGFIEYLDPNIQKAAGSEANKTWEKKEFHCTDDPPSEEY
SKHGSKRPHEGGDADSCHKTKYIGGGQENSYHISKEYSKAIELPCHKDHGHTVIKSLDGN
FAYTDETRWKIQSVLMEAIPTV
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagtatctgagtcttcaaaccctgcagcttgtcagaaacagcct
tgtagctccgtggtaccctctactggagacatggactcagcctctgcaagttggggtgct
gtatcatctttggaagttccaaagcacaagatcactttgggaccagtacctggtgctgcg
gtttattctagttcatctgtacctgataaatccaagccttcagctcagaaagatcaatct
attggtgatggcattgctccgccacagaaggttctttttccagcagagaagatttgtctg
aaatggcagcaaacgcatagagttggagctggactccaaaatcttggcaatacatgtttc
ctcaactctgctcttcagtgtttgacttatacaccccctcttgccaactacatgctttct
catgaacactctaaaacatgccatgaacaaggattctgcatgatgtgtacaatgcaagct
cacattacccaggcactctctaactctggcaatgtcatcaaacctatggctgtcatcaat
gatcttagacggatagcaaaacatttccggtttggaaatcaggaagatgcacatgaattt
ctacgctacactgttgatgctatgcagaaagcatgtttgaatggaagcaacaaattggac
agacatacccaggctaccacactcatctatcaaatatttggagggtacttaagatcaaga
gtaaagtgtatgaactgcaaaggagtctcagataccttcgatccgtaccttgatattaca
ttggagataaagaccgctcagagtgtaaacaaagctctggaacagtttgtgaagcctgaa
caactggatggtgaaaatgcctataaatgtagcaagtgtaagaagatggttcctgcttca
aagaggtttacaatacatcggtcttctaatgttcttacactgtctctgaaacggtttgca
aattttagtggtggaaaaattaccaaggaagtgaaatatcctgagtatctggatattcga
ccatatatgtctcaaccaaatggagaaccaatcatttatgttctatatgcagtcctggtg
catactggtttcagctgtcatgcaggacactactactgctatataaaggccagtaatggg
cagtggtaccagatgaatgattctattgtgtccaacagtgacatcagatctgtgcttaat
cagcaagcttatgtgctcttttatatcaggtcccatgatatgaaaaatggaggagaacac
ccccattccattcatacaccaggacagtcttctccccgtccagttatcagtcagcgggtg
gttaatagcaggcagggggcatcaggttttattggcccacagcttcctcctcacatgatt
aagagttccagtcatttaaatggaactggatcactaaaagaaactccaagcagttctgtg
gcaagtgctagcaatgttaccctaaacagaccagcttcagctccaccttcaacttccatt
caaaattggacaattaacagacccattattcctgacccttcgaaaaaacagaaaatcact
atcagtattcacaataacaaattgcctactcgccaaactctgtctcagcccaaccttcat
aattctttggagaatctcagcaaacctgttccttcgtccacgattacgaattcctctgca
gtaaagtctacctcaaatgcacctacaatgtcagttgctactaaagtatctaaacaaaca
gctcctagtgactcttgttctaagccattaatgaatggcaagtctaaactaaactctagt
acgttggtcccttacggtgcagaatcttcagaagaatctgatgaggagtcgaagggatta
gttaaggagaatggccactcaaaatcttttaatggaattttgattggaaatgtagttagt
acattacagaactcttgttcttcctgtcaagatgctgaagaggctgtatcccagcatgaa
ctgccaaaaaatgttacagttaatggtgctattagtatagatagtgatcctgaagaaaat
ggattgaaatttgaagaagctacttgtcaagtcaagcctgttaaatctacagaaattcca
ttttctaaagtgaatggattgcatggaaaaataatacctacagctttgccaccagttcct
gaagatagaattttagagtctttccgatataaccagttgaaaagcttgtcagaggaaata
agtgcaactggacttgaaaaaacttctgaaaatgatggtcctgtagaaactttagtcagt
ggcagcaatactgtttcctatgagaagtctagtaaagttcccgctaaccttagctgcaat
gtccagaatccctttactacatcagatcctgagaccatttctaccaaagaagaaattgcc
gaaagtattgtatcaaaaactgatcatgcacattctgatatcagtggtcagtgtaacact
atgaaaatatccctgggaattgatgatgaattctctgaacagtgtgatcctaaggattat
gcagataagataagaggaacacaagaggtaaaaatgacgttgaaggagagccctctgcac
atcagagggtctgctgagactgcagagaaattggggcaaagccccttcataaagtctgac
aatgaatgtagttctaaaaaacttgcagctctaaacattatagataaatgccaagaaaca
aaggagagtgctaataattacacagatgtaccacctactaatgactcttctgctacaagg
ttggataaagttttagagagtcattctaaagaaaacgatggactggatggtaatgaaata
tgtgaagaaaataaggataggcaaaaacttaagtctcattctccaattaaggaaaaaaat
tgcacccccaaaaaaattgacaaagggcattaccgtactaaaagagagcgctctgaaagt
gaagagcaggagaagcaaaccaaaagcaaaccagatgatgattattccaaaaaaaggcaa
tcctacagcaaggagagtacgaagcaagatcgctataagcaggagcactgcaatggaaat
aagtacaaacttatgcatagtgaaagaaacagtcctgataatggcagaagtttaggaaaa
tatacccattatagatcccgaagtagagggaaaactgatcaggagaggagtagatattac
cattctaaaagggaaagatcttggagtagggaaagatattaccaagatatgccaaggaga
tgggacaagtgcagatattacaacgattatccttcttatgcagcaagagatggtagagac
agaaaattctttcatggggacagagactatgacaaatcaagtcaggtttacaacagtagg
tcatatagggattattattacacaagcagatggaatcatgaaccagtagctaaagagaga
gagaaacatcattttggcagctccaaaatagacttgtataattgctcagctctctctcag
cactctgaaaaatattcccatgaaaaatgtgcatccatctctgaagaaaacagttcaagt
tttgagacgtcttgccacaaatatgaatatctaaaagacagaaagagaaaatgtgctagt
ctagaaggtagtgacagtgatatggaaaagaaacagagaaggagtttgcagagtgagcca
acggaagagcaaaaagtgaaaaaacacaagaagtcaaagaaaaaaaagaagtccaaagat
aaacaccgagagaaagatgacagacatcaccaggattcagacttctctggggcctgctct
gattctgacatccacaaacataagaaaaagaagaagaaaaagaagaaacatacaaagaaa
tctgaggggtttattgaatatttagatcctaatatccagaaggctgctggctctgaggct
aataagacatgggagaaaaaagaatttcattgtacagatgaccctccatctgaagaatat
agtaaacatgggagtaaacggcctcatgagggaggggatgctgattcctgtcataaaaca
aaatacataggaggaggccaggaaaatagctatcacatatctaaagagtatagcaaagct
atagagctaccttgtcataaggaccatggacacacagtcattaaatctttggatggcaac
tttgcatacacagatgaaaccagatggaaaattcaaagtgtgttgatggaagccatccct
acagtttaa
DBGET
integrated database retrieval system
