Lepidochelys kempii (Atlantic ridley): 140918230
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Entry
140918230 CDS
T11378
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03430
Mismatch repair
lkp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140918230 (PMS2)
03460 Fanconi anemia pathway
140918230 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkp03400
]
140918230 (PMS2)
DNA repair and recombination proteins [BR:
lkp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
140918230 (PMS2)
BRITE hierarchy
Other DBs
NCBI-GeneID:
140918230
NCBI-ProteinID:
XP_073218254
LinkDB
All DBs
Position
10
AA seq
923 aa
AA seq
DB search
MIARGWSLQELCCCGLCPRRLNVSALLACVPGVLPGRLRAGSRDSMEAPAPCAQPAKAIK
PIDHKSVHQICSGQVVLNLGTAVKELVENSVDAGATNIDLKLKDYGTDLIEVSDNGCGVE
EENFEGLTLKYYTSKIQDFSDLMHVGTFGFRGEALSSLCALSDVTIFTCHKSAKVGTRLV
FDRNGKITQKTPYPRQQGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQILQAYCIIST
GVRINCTNQVGQGKKHSVVCTTGSCSLKENIGAIFGQKQLQSLIPFVQLPPSEAVCEEYG
LKSTDTPQNLYSITGFVSHCDHGVGRSTTERQFFFVNQRPCDQSKISKVVNEVYHMYNKH
QYPFIVLNICVDSECVDINVTPDKRQILLQQEKVLLAILKTSLVGMFGSNVNKLNISQKL
LDITGNFKKIVAEETEKPQTGMLLDSAAQNPKREEKRAMTIVKLRESFSLHQMTESSFQS
PNNVGNQHNSPGKRKLTSFLNTSSPVKSAKSISSKESEHWRQMDSNTYSVTSRDLRKLEN
DTDSGCGSTSAESNVGFSTPEVGSCLSNESAGSSPEEEFIISKEELQSVCLETVELSEES
LEYDAKFSEVEHELTQVGEQNELSELPQQANSFPPNVKRFKSEQANLKAASCPELRSAEN
HASVPHVDVPIEIKKKTVPLEFSMSSLAERVKRLIQQQQKKAETQNYRRFRAKISPGDNK
TAEDELRKEISKEMFAKMEIIGQFNLGFIVAKLNSDLFIIDQHATDEKYNFEMLQQHNIL
QGQKLIAPQNLNLTAVNETILIENLEIFRKNGFDFVIDEDAPVTERVKLISLPTSKNWTF
GPQDIEELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALTVNEMKKLITHMGEIE
HPWNCPHGRPTMRHIANLDMISQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgcgggggtggagcctacaggagttgtgctgctgtgggctctgtcccaggcgg
cttaacgttagcgcgctgctggcctgtgtcccaggagtcctgcctggccgcctgcgtgcc
gggagcagagactctatggaggccccggcaccctgtgcacagcctgctaaagccatcaag
cctatagatcataaatcagttcaccagatctgttcaggacaggttgtactgaatctaggc
actgcggtgaaggaattggtggaaaacagtgtagatgctggagctactaatattgaccta
aagcttaaagattatggaacagatcttatagaagtttcagataatggttgtggagtagag
gaagaaaactttgagggcttaactctgaaatattatacttccaagatacaagatttctct
gatctaatgcatgttggaacatttggatttcgaggtgaagctctgagttcactgtgtgcg
ttaagtgatgttaccatttttacttgtcacaaatctgcaaaggttggaactcgtctggta
tttgatcgcaatggaaaaattactcagaaaactccttacccacgacaacagggaacaact
gttagcgtgcagcaattgttttataccctgccagtgcggcacaaggaatttcaacgaaat
attaaaaaggaatatgcaaaaatggtccaaatattacaagcatactgtatcatttcaacg
ggagttcgaattaactgcaccaatcaggttggccaagggaaaaaacactcagtggtgtgt
accactggaagttgtagtctaaaggaaaacattggagcaatatttgggcaaaaacagttg
caaagcctcattccctttgttcaactacctcctagtgaagctgtttgtgaagaatatggc
ctcaaatccactgatacgccacagaatctttattctattacaggcttcgtttcccattgt
gatcatggtgttggaaggagtacaacagagagacaatttttctttgtcaatcagcgacca
tgtgaccaatcaaagatttccaaagttgtgaatgaagtttaccacatgtataataagcac
caatatccatttatcgttcttaacatttgtgtagattctgagtgtgttgacatcaatgta
actcctgacaagaggcaaattttactgcaacaggagaaggttttgttagcaattttaaag
acctctcttgtgggaatgtttggtagcaatgtcaacaaacttaacatcagtcaaaaactg
ctggatattacaggtaacttcaaaaagatagtagcagaagaaacagaaaagcctcagaca
ggaatgctgcttgattctgcagcccagaatccaaagagagaagagaaaagagcaatgact
attgtcaaattaagagagtcattctctctccatcaaatgacagagagcagctttcagagc
cctaacaatgttggaaatcaacacaactccccggggaagagaaaacttacgtcatttctt
aacacttcaagtcctgtaaagagtgcaaagtccatctccagcaaggaatctgaacattgg
aggcagatggactcaaatacatactcagttactagcagagatttgaggaagttagaaaat
gacacagattctggatgtggtagcacatctgcagagtcaaatgttggctttagtactcca
gaagttggtagctgcctcagcaatgaaagtgcaggcagttcacctgaagaagagttcatt
atttcaaaagaggagcttcaaagtgtatgtcttgaaactgtcgaacttagtgaggaatca
ttggaatatgatgccaaattttcagaggttgaacatgaattgacccaagtcggtgaacag
aatgaactgagtgagttacctcagcaagccaatagttttcccccaaatgtgaagcgtttt
aaaagcgagcaagctaatttaaaggcagccagctgtccagaactgaggagtgctgagaac
catgcatcagtgccacacgttgatgtaccaattgaaattaaaaagaaaactgtgccactt
gagttctctatgagctctttagcagaaagagtaaaaaggctaatacagcagcaacagaaa
aaggcagaaacacagaattatagaagatttagagcaaagattagccctggagacaataaa
acagcagaggacgaattaagaaaagaaatcagtaaagagatgtttgcaaaaatggaaatc
ataggtcagttcaatttagggtttatagtagccaagctgaactctgatctcttcataatt
gaccaacatgctactgatgaaaaatacaactttgagatgttacaacagcacaacattctc
caaggtcagaagctgatagcgccacaaaatcttaatttaactgctgtaaatgaaaccata
ttgattgaaaacttggagatatttagaaaaaatgggtttgattttgtcattgatgaagat
gctcctgtaactgaaagggttaagttgatttccttgccaacaagcaaaaattggactttt
ggtccacaggacatagaggagttgatcttcatgttaagtgattgcccaggagtcatgtgt
aggccctctagggtcagacagatgtttgcgtctcgagcttgtagaaaatctgtgatgatt
ggaactgcacttactgtaaatgagatgaagaaactgatcacccacatgggtgagattgag
catccttggaactgtccccatggaaggccaactatgaggcacatagccaatttagatatg
atttctcaataa
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