Leptospira kirschneri: FH602_02960
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Entry
FH602_02960 CDS
T08837
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lkr
Leptospira kirschneri
Pathway
lkr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FH602_02960 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkr03400
]
FH602_02960 (uvrB)
DNA repair and recombination proteins [BR:
lkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FH602_02960 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FH602_02960 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
SWI2_SNF2
AAA_33
Microtub_bd
AAA_7
AAA_16
AAA
nSTAND_NTPase5
AAA_22
UB2H
AAA_14
TsaE
Motif
Other DBs
NCBI-ProteinID:
UML80657
LinkDB
All DBs
Position
1:complement(85496..87496)
Genome browser
AA seq
666 aa
AA seq
DB search
MASVFKIHSAYQPAGDQVKAIQNIADSFQKGEKKVTLVGVTGSGKTFTMAQVIQNLGLPT
LVLSHNKTLAAQLFREFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEEID
KLRLRATSSLLEREDVVIVSSVSCIYGLGSPEEYTNSVVALKVGDTIERDAVIRKLLHIQ
YNRNDLDFSRGNFRVRGDSIEIYPAYHTDGIRIEFFGDEIDSISRINPVTAQTIFKLEKA
YIYPAKHFITSGPKVKEAVENIRAEVDAQTDFFRKNNKLLEAERILSRTNYDMEMLQEMG
YCNGIENYSRHLTGRKPGERPACLIDYFQGEFLLIVDESHVTIPQIGGMFAGDRARKQTL
VDFGFRLPSALDNRPLNFQEFEILTPRTLYVSATPSEYEIEKSSKVVEQIIRPTGLLDPI
VEVRPTKNQIEDLLVEIRKRIDAGERVLVTTLTKKMSEDLTDYYEEIGLKVAYLHSEVET
LDRVGIIRDLRKGIYDVLIGINLLREGLDIPEVSLVAILDADKEGFLRNYKSLIQTIGRA
ARNVNGTAILYADKTTDSMAKAIEETKRRRKIQEDHNLKFGITPLTIKKEVGDIIEREEK
ERTSEDLVLEDVEKKFNFKKFPNKEVLKEKLREEMMKAAKELDFERAAILRDKMLSIQTE
DPSAKN
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtttttaaaattcattccgcatatcagccggccggggatcaagtcaaagcg
atccaaaacatagccgattcttttcaaaagggagagaagaaggtgacgttggtaggcgtg
accggttcgggtaaaacctttacaatggctcaggtcattcaaaatttgggacttcctacc
ctggtcttgtcgcataacaaaactttggcggctcaactctttcgagagtttaaggagttc
tttcccgaaaacgcagtggaatattttgtttcttattatgattattatcagccggaggcg
tatgttccttcttcggatacttttatcgaaaaggacagttccatcaacgaagagatcgat
aaacttagattgagggccacttcttctttgttggaaagggaagacgtggttattgtaagt
tctgtttcttgtatctacggtctaggttctccggaagaatatacaaactcggtcgtagct
ttaaaagtaggtgatacgatcgaaagggacgctgtaattcgtaagttgttacacatacaa
tataaccggaacgatttggatttttcaaggggaaactttcgagttcgaggagattcgatc
gaaatttatcctgcgtatcataccgacggaatcagaattgaattttttggggacgaaatc
gattcgattagtagaattaatccagttaccgcacaaacgatttttaaattagaaaaagct
tatatttatccagcaaaacattttattacttccggtccgaaggttaaagaagcggtcgaa
aatataagagcggaagtggatgctcagactgacttttttagaaagaacaataaacttctg
gaagcggaaaggatcttatcccgtacgaattacgatatggaaatgctccaggaaatgggg
tattgcaacgggatagaaaattattccagacatcttactggaagaaagccgggagaacgt
ccagcctgtttgatcgattattttcaaggagagtttcttctgattgtggacgaatcccac
gtaacgattccgcagatcggaggaatgttcgctggagatagggcccgcaaacagacgtta
gtcgacttcggctttagacttccgagcgctttggataataggcctctcaattttcaagag
ttcgagattttaactcctagaaccctttatgtttctgcaactccctctgagtatgaaatt
gaaaagagttccaaggttgtagagcagatcattcgaccaactggacttttggacccgatc
gtggaagtacgtcctactaaaaatcaaatcgaagaccttcttgtggaaattcgtaaacgt
atagacgcgggagaaagggttcttgtcactactctcactaaaaaaatgtcggaagatctt
accgattattacgaagagatcggtttaaaggtggcttatctacattctgaggtggaaacc
ttggatcgtgtcggaatcattcgagatctaagaaagggaatttacgacgttctgatcgga
atcaatcttttacgggaaggtttggatattccagaagtttctttggtcgctattttggac
gcggataaggaaggttttttaagaaattataaatctctaatacagacgattggtcgtgcc
gcgagaaacgtaaatgggacggcgattctttacgcagataaaacaaccgattctatggca
aaagcgatcgaagaaaccaaacgccgtagaaagattcaggaagatcataatctcaaattc
ggtattactcctctgactatcaaaaaggaagtaggagatattatcgaaagagaagagaag
gagcggacttcggaggatctggttctggaagatgtggagaaaaaatttaattttaagaaa
tttccgaataaggaagtattgaaagaaaaacttcgtgaagagatgatgaaagcggctaag
gaacttgattttgaaagagccgcaattttgagggataaaatgttatcgattcaaacggaa
gatccttcagccaaaaattaa
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