Leptospira kirschneri: FH602_03070
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Entry
FH602_03070 CDS
T08837
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lkr
Leptospira kirschneri
Pathway
lkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH602_03070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkr03019
]
FH602_03070
03400 DNA repair and recombination proteins [BR:
lkr03400
]
FH602_03070
Enzymes [BR:
lkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FH602_03070
Messenger RNA biogenesis [BR:
lkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FH602_03070
DNA repair and recombination proteins [BR:
lkr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FH602_03070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
RQC
Cas3-like_C_2
Helicase_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
UML80677
LinkDB
All DBs
Position
1:complement(109745..111610)
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AA seq
621 aa
AA seq
DB search
MNSEQNQHIQNLEYILNKKWGLPKFRSGQKKAIESLISGKDTLAILPTGGGKSLIYQFPT
ILDETSLTLVISPLIALMKDQVDSLKAKGIAAEYCNSSQDDLEQLRILSRAVTGKIRILY
LSPEKALGRQVLEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKLYELRDKYPKPIPVVA
LTATATSRVIKDISDSLGLKNPILIKGSFYRENLRFSVRFPQNEISRENELLKLLVKGNF
QKVSSGRVIVYCATRQKVETVYGFLKKNGFKVGKYHAGRTDSSREKTQDGYNNGKTNILV
ATNAFGMGLDQPNVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFI
IGKENNRKGGETLLSHLKEYSISNKCRQQTLCSYFDEEILPCKTCDICLEKESTFADERD
RFLEREKNKRLKQEIRERYEFSKEELGTIEKVLEQIPGKFGKRMIVGVLRGSRSNEILRK
KLDRLIGYGSLRSVAEEAILKILDEWISEKKIKIVGDKYPKLILSSTVIVKVPRKKKSSD
TESEKKTIPAKNLIQELKNFRDREARRRKWKKFMVLQNPVIVQIAKEMPETPEELSCVKG
MGTAKVEKFGNDILRILEKWK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagaacagaaccaacatattcaaaatttagaatatattcttaataaaaaatgg
ggattgcccaaatttagatccggacaaaaaaaagcgatcgaatccttgatctccggaaag
gatacgttagctattcttccaactggaggaggaaaatccctcatataccaattcccgacg
attttagatgaaacctcgttgacacttgtaatttctcccttgatcgcattgatgaaagat
caggtagactcactcaaagcaaaaggaatcgcggcagaatactgcaactccagtcaggat
gatctagaacaattgagaattttaagtagggcggttaccggtaaaatcaggatattatat
ctttcacccgaaaaggcgcttggaagacaggtgttggaaattcttccgaaatttcctttg
gcaagaattgccgtagacgaagcgcattgtgtatcccaatggggacacgattttagaccc
gaatatagaaagttatacgaacttagggacaaatacccgaaaccgataccggtggttgcg
ttaaccgccacagctacgtccagagtcatcaaggacatatcggattcgttaggactcaaa
aatccaatattgatcaagggaagtttttatagagaaaatcttagattttcggttcgtttt
cctcaaaacgaaatttcaagagaaaacgaacttttgaaacttttagttaaaggaaacttt
caaaaagtttcaagtggaagagtgatcgtctactgcgcaactagacaaaaagtagaaaca
gtttacggttttctaaaaaagaatggatttaaagtcggcaaatatcacgcgggaagaacc
gattccagtcgagaaaagacacaggacggatataacaacggaaagacaaatatattggtg
gcgactaacgcgtttggaatggggttggatcaaccaaacgttcgtttggtgattcactat
cagataccagcctctttggaaagttattatcaagaagcgggtagagccggaagggacgga
aaaccttccgactgtgtccttttttatcatccttctgatcttgtgacacaaggttttata
ataggaaaggaaaacaatcgaaaaggaggagaaacgttactctcccatttaaaagaatat
tccatttctaacaaatgcagacaacaaacactttgttcctactttgacgaagagatctta
ccttgtaaaacctgtgacatctgtttagaaaaagaatctacttttgcagatgaaagagat
cggtttttggaaagagaaaaaaacaaacgattaaaacaagaaataagggaaagatatgaa
ttttcaaaggaagaattaggaacgatcgaaaaagtattagaacaaattccaggtaagttt
ggtaaaaggatgatcgtaggagtgttacgcggttctagatcgaacgaaattctgagaaaa
aaattggatcgtttaatcggatacggttctttacgttccgttgcggaagaagcgatttta
aaaattttggatgaatggatttcagaaaaaaagataaagatcgtaggagacaaatatcct
aaattgattctttcctccacagtaattgtcaaggttccccgtaagaaaaaaagttcagat
acagaaagcgaaaaaaaaacgattcccgccaaaaacttgattcaagaattaaaaaatttt
cgagatagagaagccagaagaagaaaatggaaaaagtttatggtacttcaaaatcccgtc
attgttcaaatagcaaaggagatgccggagactccggaagaattatcttgtgtaaaagga
atgggtactgcaaaggtagaaaaattcggcaatgatattttaagaatattagaaaaatgg
aaataa
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