Leptospira kirschneri: FH602_06680
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Entry
FH602_06680 CDS
T08837
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lkr
Leptospira kirschneri
Pathway
lkr03030
DNA replication
lkr03430
Mismatch repair
lkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FH602_06680 (dnaE)
03430 Mismatch repair
FH602_06680 (dnaE)
03440 Homologous recombination
FH602_06680 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lkr03032
]
FH602_06680 (dnaE)
03400 DNA repair and recombination proteins [BR:
lkr03400
]
FH602_06680 (dnaE)
Enzymes [BR:
lkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FH602_06680 (dnaE)
DNA replication proteins [BR:
lkr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FH602_06680 (dnaE)
DNA repair and recombination proteins [BR:
lkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FH602_06680 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
UML82160
LinkDB
All DBs
Position
1:936108..939575
Genome browser
AA seq
1155 aa
AA seq
DB search
MLDGAIRIKELMQHVKGCGMSSVAMTDHGNMFGAVEFYNEAIKQGIKPIIGSEFYVSPNR
KQETEMVKIADGNAYHLILLAKNEEGYKNLIRLSSKSYTEGFYKKARIDYDLLDRHSQGL
VCLTACLAGEVNRKILEGKIDESFQLAGKLNEIFRKEDFYMEIQNHGIPEQMTVAKQIYE
FGKKTGIPLVVTNDSHFLKKDDQEAQDILLRIGMQKRITDPMEFGFNGEFYVKSPDEMAR
VFPEIPEAFHNTLEISNKVNLKLQFGNYLLPEFEVPEGYDADSYLEKLIWEGIERKYPNL
SSEIKERVIFELNTIKNMKFAGYFLIVQDYINYAKRNGIPVGPGRGSAAGSIVAYALGIT
NVEPLQHNLLFERFLNPDRKDMPDIDTDFCVERREEVINYIRRRYGEERVGQIITFNSLA
AKAALKDVARVLNLPFGEANEMTKAFPNKLGMSISEALSTSSELKNFSEKDDINHKIFAI
AQRLEGNYRQPGRHAAGVVISPYPLEEVVPLSTVAEKEKPGVRAIVTQYDKNNLESIGLI
KMDILGLKNLTTLDYAIKLIEQRRGIRINLDEISYDDANTYSLLRKANTLGIFQLESTGI
TDLVAKSQVSNFDEIVALIALYRPGPMGEGMLDEYLDRKSGRKQVTYPHPSCESILKETF
GVPVYQEQVMSISRVVGGFSVGDSDVLRKAMAKKKADLMDKLKVQFVEGAVKQGIQEKVA
KDLFEQLERFGGYGFNKSHSVAYAIITYQTAYLKANYTIEYLTALLASDHGKTTDIVKYI
NNAREMGIQILNPDVSESQASFSVIDDTTIRFGLSAMKGVGETAANSIIQARTKVGSFKT
LQDFALNIDTRLINKKVFEALIQAGALDSFGYTRKCLFESVDSILTFAQKEQERTNEGQF
SLFGNEESSFSLNLPKNALEWEIDEKLKREKAVAGLYLSGHPLDKYEKQLKSLKTIPIEK
FDDLKSGTKVEVAGVISSKNIKLSKRNEEFANFKLEDRTGEIECVAFAKTYQKYKEFIKE
DQAIFIKGDLDKIEVGDTELRGQVKVNSIEILDDATIEDKLEKSLHLRLEERHTEDPELV
PKLYALLACYKGESSVYFHIVENQEEKRVIRAHDAYSIQPINELFLRLADLLGDRSVFYS
VGEQLKAINKSQAAG
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggagcaattcgcatcaaggagctgatgcaacatgttaagggatgtggtatg
tcttcggttgcaatgaccgaccacggaaacatgttcggagccgttgagttctataacgag
gcgatcaaacaaggcatcaagccgattatcggaagcgaattttacgtttccccaaaccgt
aaacaagaaacggaaatggtaaaaattgcggacgggaacgcgtaccatctcatcttactt
gcaaaaaacgaagagggttacaaaaatctaatacgtctttccagtaagtcctacacggaa
ggtttttataaaaaagcgagaattgattatgatcttctggatagacacagtcaaggtctt
gtttgtttgaccgcctgtcttgcgggtgaagtcaatcgaaagattttggaaggtaaaata
gatgagtcttttcaactcgcaggtaagttgaacgagattttccgtaaagaggatttctat
atggaaatccaaaaccacggaattcccgaacagatgacggttgctaaacaaatttacgaa
tttggaaagaaaaccggaattccgctcgttgttacaaatgattcccacttcttaaagaaa
gacgaccaagaagcgcaagatattcttcttagaatcggaatgcaaaaacgtattactgat
ccgatggaatttggttttaacggagaattttatgttaaaagtccggatgaaatggctcgg
gtatttcccgaaatccccgaggcgtttcataatacattagaaattagtaataaagtaaat
ttgaaacttcaatttggaaattatcttcttccagaattcgaggttccggaaggttacgac
gcggattcttatcttgaaaaattaatttgggaagggatcgaaagaaaatatccgaacctt
tcttcggaaatcaaggaaagagtgatcttcgaactcaatacgattaaaaatatgaagttt
gcaggttactttttgatcgttcaagattatattaattacgcaaaaagaaacggaattccg
gtcgggccaggaagaggttcggcggcaggttccatcgtcgcttatgcactcggaatcacg
aacgtagaaccgcttcaacacaatttactttttgaaagatttttaaacccggatcgtaag
gatatgccggatattgatactgacttttgtgtggaacgcagagaagaggtgatcaattac
atacgtagaagatacggagaagaacgtgtaggtcagattatcacgttcaattctcttgcg
gcaaaagcggctctcaaagatgtggcacgcgttttgaatcttccatttggagaagcgaat
gaaatgacaaaggcgtttccgaataaattaggaatgtctatttcagaagctttatccact
tcttccgagttaaaaaacttttcggaaaaagacgatatcaatcataaaatttttgcgatc
gctcaaaggttagaaggaaattaccgtcagcctggaagacatgctgcgggtgtggtcatt
tctccttatcctttagaagaggtagttccactttccacggttgcggaaaaggaaaaaccg
ggtgttcgtgcgattgtaactcaatacgataaaaacaatttagaaagtatcggccttatc
aagatggatatcttgggtctaaaaaacttaactaccttagattacgcaattaaactcatt
gaacaaagaagaggaattcggattaatctggatgaaatttcctacgatgatgcgaataca
tactctcttcttagaaaagcaaatactttaggtatcttccagttagaatctactggaatt
actgatctggttgcaaagagtcaggtaagtaatttcgacgaaattgtagctttgattgct
ttgtatcgtcccggtccgatgggagaagggatgttggacgaatatttggatcgtaaatct
ggaagaaaacaagtcacctatccacatccatcctgtgaatcgattttaaaagaaactttt
ggagttccggtttatcaggaacaggtgatgagtatttcccgcgttgtcggaggattttcg
gtcggagattcggacgtattgcgtaaagcgatggccaagaaaaaagccgatttgatggat
aaattgaaagttcagtttgtcgaaggtgcggttaaacaaggaatccaagaaaaggtagca
aaggatcttttcgaacaattggaaaggtttggtggttatggattcaataaatcgcattcg
gtcgcttatgcgatcattacttatcaaactgcttacctaaaagcgaattatacgatcgaa
tacctcacggctcttcttgcttccgatcacggtaaaacgactgacatcgtaaaatacatc
aataacgcgagagaaatgggaattcaaattctcaatccggacgtttccgaatctcaggct
tcttttagcgtgatcgacgatactacgattcgtttcggactttccgcaatgaagggagtg
ggagaaacggctgcaaatagtatcattcaagcgagaaccaaagtaggaagttttaaaacc
ttacaagacttcgcattaaatatagatacaaggttgatcaacaaaaaagttttcgaagct
ctgattcaagcgggagccttagactcttttggttatactcgaaaatgtctttttgaatct
gtagattcgattttgactttcgcacaaaaagaacaagaaagaacaaatgaaggacagttt
tcactttttggaaacgaggaaagttctttctctctcaatcttcccaaaaacgcgcttgaa
tgggaaattgacgaaaaattaaaaagagaaaaagcggtagccggtctttatctttcgggt
catcccttggacaagtatgaaaaacaacttaaaagtttaaaaacaatcccgatcgaaaaa
tttgatgatttaaaatctggaactaaagtggaagttgcaggtgtgatttcttctaagaat
atcaaactcagtaaacgaaacgaagaatttgcaaacttcaaactagaagacagaaccggc
gaaatagaatgtgtcgcattcgcaaagacgtatcagaaatataaggaatttataaaggaa
gatcaagcaatctttatcaaaggggacttggataaaatcgaagtgggagatacggaactc
cgcggacaggttaaagtcaacagtatcgaaattttagacgacgcgacaatcgaagataaa
cttgaaaaatcgcttcatctccgactggaagaaaggcatacggaagatcctgaactggtt
ccaaaactttacgcattactagcttgttacaaaggagaatcttccgtatattttcacatt
gtggaaaatcaagaagagaaaagagtgattcgtgctcatgacgcctattcgatccaaccg
atcaatgaactttttttacgattggcagatcttttaggcgatcgttccgtattttattct
gtaggagaacaactcaaagcgatcaataaaagtcaggctgcgggttga
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