Leptospira kirschneri: FH602_09900
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Entry
FH602_09900 CDS
T08837
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lkr
Leptospira kirschneri
Pathway
lkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH602_09900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkr03019
]
FH602_09900
03400 DNA repair and recombination proteins [BR:
lkr03400
]
FH602_09900
Enzymes [BR:
lkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FH602_09900
Messenger RNA biogenesis [BR:
lkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FH602_09900
DNA repair and recombination proteins [BR:
lkr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FH602_09900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_C_2
CRISPR_Cas2
DUF748
Motif
Other DBs
NCBI-ProteinID:
UML81861
LinkDB
All DBs
Position
1:complement(1733840..1735288)
Genome browser
AA seq
482 aa
AA seq
DB search
MASLSELKTLFGISSFRTSQEKIITDVLSGKNCMVIMPTGMGKSICYQIPALILEGLTIV
ISPLIALMQDQVLKLKRLGIEAGYINSSLSKQDRLQSYQYLKDGKYKIIYVSPERFRKNE
FLDCLKNRKVSLLAIDEAHCISQWGHDFRPDYTKISEFRKILGKPTTIALTATATTEIQK
DMILQMGLENSEIIIYNEGICRPNLFLDVRTFVDEPSKSDGILELLKKQNGSTIVYFNLI
QSLEKFCEKLDIQKFEYSVYHGKLNTDQRKKIQNRFLKSDDKILLATNAFGMGVDKPNIR
TIIHAELPSSLESYYQEIGRAGRDGKPSDCHVFYNQDDLSVLMDFIEWQNPDAAFISRTF
QTLEHLGEKLSSIDYEDLQSKIVSKNRGDHRLQTVLNLFDRYGVTSGELEKNSLKLISTL
PKALCSTESLELKKKTSLKRLYQMLLYLKSEKCRREFVYQYFDAKFSECGNCDICKNSNE
SN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctttccgaactcaaaacccttttcggaatttcttcttttagaacctctcaa
gaaaaaatcattacggatgttctttccggaaaaaattgtatggtgatcatgcctaccgga
atgggaaaatcgatctgttatcaaattccagcgcttattttagaaggattaacaatcgtc
atatctcctctgatcgcgctcatgcaagatcaagtgttaaaactgaaacgactcggaatc
gaagctggttatatcaattcttccctttctaaacaagataggcttcaaagttatcaatac
ctaaaagatggtaaatacaagatcatatacgtttctccagaacggtttcgtaagaatgaa
tttttagattgtcttaaaaacagaaaagtttctcttcttgcaattgacgaagcacattgt
atcagccagtggggtcatgacttcagaccagattacactaaaatttccgagttccgaaaa
attttaggtaaaccgaccacgattgcgttaaccgcaacagctacgaccgaaattcaaaaa
gacatgattcttcaaatgggactagaaaattcggaaatcataatatataacgaaggaatt
tgcagaccaaatctttttttagacgtaagaacgtttgtagacgaaccttctaaatcagat
ggaattctagagcttttaaaaaaacaaaacggaagtacgatcgtttatttcaacctcatc
cagagtctggaaaaattctgcgaaaaattagatattcaaaaatttgaatattcagtttat
cacggaaagctaaataccgaccaaagaaaaaaaatacaaaaccgatttttaaaatcggat
gataaaattctactcgctacaaacgcgttcgggatgggagtagataaaccgaacattaga
acgatcatccatgcagaacttccttcttctttagaaagttattatcaggaaattggaaga
gcgggaagagacggtaaaccttccgattgtcatgtgttttacaaccaagacgacctttct
gtattgatggattttatagaatggcaaaatccggacgcggcgtttatctcccgtacattt
cagactttggaacatttaggagaaaaattatcttcgatcgattacgaagatttacaatct
aagatcgtttctaaaaacagaggagatcacagacttcaaaccgttcttaatctatttgat
agatacggagtcacttcaggagaattggaaaaaaattctttaaaattaatttccactttg
cccaaagctttgtgttctacagaatcgctagaacttaaaaagaaaaccagtttaaaacgt
ctgtatcaaatgcttctttatttaaaatcagaaaaatgcagaagagaattcgtttaccaa
tactttgacgcgaaattttcagaatgcgggaactgcgatatttgcaaaaattctaatgaa
tcaaattaa
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