Apilactobacillus kunkeei: APS55_03075
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Entry
APS55_03075 CDS
T04112
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lku
Apilactobacillus kunkeei
Brite
KEGG Orthology (KO) [BR:
lku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lku03400
]
APS55_03075
Enzymes [BR:
lku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APS55_03075
DNA repair and recombination proteins [BR:
lku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
APS55_03075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
DEAD
PDDEXK_1
BTB
AAA_30
Diphtheria_C
AAA_16
ResIII
AAA_22
BACK_BPM_SPOP
Motif
Other DBs
NCBI-ProteinID:
ALJ31274
UniProt:
A0AAC8ZYN3
LinkDB
All DBs
Position
709051..712776
Genome browser
AA seq
1241 aa
AA seq
DB search
MEYTKPQKEAVTGHFDENVLVSASAGSGKTRVLVDRVINKLLNDRVNIDEMLIVTFTKAA
AKEMRDRIQKALQQELKKATDSDVKAFLVRQLRRLPVADISTMDSFCQKIVQSYYYIIDL
DPNFRLLADQTESQMLKEQVWDSVREDLYANDSDGLFAQLTENFSNDRSDDGLTDLVFRI
YDYANVNRDPVDWLKNTTKIYDIDGDDLVHSDFYQNNLLPFIQNDLTQQRLSFESAKRIA
DENLMEKEAASVQVDIDNINVLYDMLPDSDWNDIKQAFEDIKFKAFPRVTKDYDDIAKGL
HDRIKDIRDNAKKAVQKLPDKYFTLNEEENLSVMKASKQLIEKLIQVVLAFTDSYQKTKL
KRHCLEFIDVEHYAYGILSGSDGESKAVRVNLQNQYNEIMVDEYQDNNRLQDAILSTLAN
PEHSNMFMVGDVKQSIYRFRLADPSMFIERMDSEDGHTIVLPDNFRSAENIDDFINLVFT
QTMDKRVGEIDYTGDAKLKAGAKYYPDELQSNVDVMIYESKDDEEEPIDDQFQVQDSAHG
QVEMVAQKINEMIEKQLPVFDRDKQVMRPIQYSDISIISSTRNNNLIISDIFGSYNIPVL
INGAQSYFKTTEIQIMMSMLSIIDNPYQDIPLVAVLRSPMVGLNENQLAYLRINQKTGDY
FNAVINFYDNYENMDHSEFGDQVFSRVKTFVEQLKHFRDVAQQHPIVDLIWDIYETTGFL
DYVGGMPAGRQRQANLHALYERAYDYEQTSFKGLFQFVRFVRRMQERNDDLDEANADDNQ
DAVSVMTIHGSKGLEFPVVFLMDASHGFNRQDSNKAYILNDHLGLGITYTDPDTRIKQDS
LQRQVVGAIENQGLLAEEMRKLYVALTRAEQQLFIVGASKNENDRTKVIDTWNKAASGDT
LLVDAALRSGAKSYLDWIGPALVRHPNFRNKFGDDVTYKGLDDDQTNFDVEFVNANDLAQ
HSPSGDSAVSAKWLNHIVESAKKMVPKDINVDDVDQVLDFTYQNQVATHTTAYQSVSEIK
RLFEDPDSIQLGNYDEHWQENNKQKNMYVSSNFTVPKFMQSVVKPSAAEVGTATHLLLQE
VPLDHKPEVGDVVGMLQRLVADKVVTPEIADLIQTQEVINVFDSELGLQMLAHPERIHRE
APFSMLMDANLVFPGFNADSPEKILIHGIIDGYIELDDEVILFDYKTDYVPNDSDRSINK
AVKKYKGQINLYAKALENILHKPVTDKFIYLLSINKPVKIK
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggaatacacaaagccacaaaaagaagccgttaccggacattttgatgaaaacgtcctc
gtttcagcctcagccggttctggtaagacccgtgtcctagttgaccgtgtgattaacaag
ttattaaacgaccgcgtcaacattgatgaaatgctaatcgttacctttaccaaggccgct
gccaaggaaatgcgtgaccgtattcaaaaggcgttacaacaagaattgaaaaaggccacc
gactccgacgttaaggcatttttagtgcgtcaattacgtcgtttgccggtcgctgatatt
tcaacaatggactcattctgtcaaaaaatcgtccaaagttattactacattattgatttg
gaccctaactttagattgttggcggaccaaaccgaaagccaaatgctaaaagaacaggtt
tgggattcagttagagaagacctatacgccaacgatagtgatggcttatttgctcaattg
accgaaaacttctccaatgaccgttccgacgatggtttaacagacttagtatttagaatt
tatgattacgccaacgtaaatcgtgacccggtcgattggttgaagaataccaccaagatt
tacgatatcgatggagatgatttggttcattccgacttttaccaaaacaatctattaccc
ttcattcaaaacgatttgacccaacaacgtctatcttttgaatcagctaaacgaattgct
gacgaaaacttgatggaaaaagaagcggcttccgttcaagtcgatattgataatatcaat
gtcctatatgacatgttgcctgattcagattggaatgacattaagcaagcctttgaagac
attaagttcaaggctttcccacgtgttaccaaggactatgacgacattgctaagggactt
cacgaccgtatcaaagacattcgagacaacgccaagaaggcggttcaaaaactacccgat
aagtactttacgttaaacgaagaagaaaacctttcagtaatgaaggcttccaaacaatta
atcgagaaattgatacaagttgtcctagcattcaccgatagctatcaaaagactaaattg
aagcgtcactgtctagaattcattgatgtggaacattatgcctacggtattctatctggc
tcagacggcgaatctaaggctgtcagagtgaacctccaaaatcaatataatgaaatcatg
gtcgatgaataccaagataataatcgtctacaagacgcgattttatcaacattggcgaac
ccagaacacagcaatatgttcatggtgggagacgttaaacaatccatctaccgtttccgt
ttagccgatccttctatgtttatcgaacgcatggatagcgaagatggccacaccattgtc
ttacccgataacttccgttcagcagaaaacatcgatgacttcatcaacttagttttcacc
caaacaatggacaaacgagttggagaaattgactacaccggggatgccaaactaaaggcc
ggtgctaaatactatccagacgaattacaatccaacgttgatgtgatgatttacgaaagc
aaggacgatgaagaagaaccaattgatgaccaattccaagtccaagacagtgcgcatggc
caagttgaaatggtcgctcaaaagattaacgaaatgattgaaaagcagctaccagtgttt
gaccgtgacaagcaagtgatgcgtccaatccaatactctgatatctcaattatttcttcg
actagaaataacaacttaatcatttccgatatctttggttcatacaacattccggtccta
atcaacggagcgcaaagttacttcaagaccaccgaaattcaaatcatgatgtcgatgtta
tcaatcattgataatccataccaagacattccattggttgcggtattgcgttcaccaatg
gttggtctaaacgaaaaccaattggcatacttgagaattaatcaaaagaccggggattac
ttcaatgccgtaattaacttctacgataattacgaaaacatggatcactccgaatttggt
gaccaagtattttcacgtgtgaagacatttgtcgaacaattaaaacattttagagatgtt
gcccaacaacatccgattgttgatttaatctgggacatctatgaaactactggattcttg
gattatgtcggtgggatgcctgccggaagacaacgccaagccaacctacatgccttatac
gaacgtgcatatgactacgaacaaactagttttaagggattgttccaattcgttcgattt
gtgcgtcgtatgcaagaaagaaacgatgacttggatgaagccaatgctgatgacaaccaa
gatgcagtatcagtaatgaccattcacggaagtaagggactagaattccctgtcgttttc
ctaatggatgcctcacatggttttaacagacaagatagcaataaggcctacatcctaaat
gatcacctaggattaggaattacctacaccgacccagacactcgaattaaacaggattca
ttgcaacgccaagtggttggggcaatcgaaaaccaaggattgttggccgaagaaatgcgt
aaactatacgttgcgctaacccgtgccgaacaacaactattcatcgttggtgccagcaag
aatgaaaacgacagaaccaaggtcatcgatacctggaacaaggccgctagtggtgacacc
ttactagtcgatgccgctttaagaagtggtgccaagagttacctagactggattggtccc
gcattggtccgtcatcctaactttagaaacaagttcggcgacgacgttacctataaaggc
ttagatgatgatcaaaccaactttgacgtcgaattcgtgaatgccaacgacctggctcaa
cacagtccatcaggagacagtgcggttagtgctaagtggttaaatcacattgttgaaagt
gccaagaagatggtaccaaaggacatcaatgttgatgatgtcgaccaagtattggacttc
acttatcaaaatcaagttgcgactcataccactgcctatcaatcagtttccgaaattaaa
cgactatttgaagatccagatagcattcaattgggaaattatgatgaacattggcaagaa
aataataagcaaaagaacatgtatgtcagctctaactttacggtgcctaagttcatgcaa
tcagtcgtaaaaccaagtgctgctgaagtcggaactgccacccacttgttgctacaagag
gtgccattggaccacaagccagaagttggtgacgtggtagggatgttacaacgtttagtt
gccgataaggtcgttaccccagaaattgctgacttaattcaaacccaagaagttatcaat
gtgtttgacagtgaattgggactacaaatgttggctcatccagaaagaattcatcgtgaa
gcaccattctcgatgctaatggatgccaacctagtattccctggttttaatgccgattca
ccagaaaaaatcctaattcacgggattattgatggttatatcgaattagacgatgaggtc
atcttgtttgattacaagaccgactacgtgccaaacgatagtgatagaagtattaataag
gccgttaagaagtacaagggtcaaattaacctatatgccaaggcgttggaaaacatcttg
cataaaccggttaccgataaatttatctacctactatcaatcaataaaccagttaaaatt
aagtaa
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