Apilactobacillus kunkeei: APS55_05055
Help
Entry
APS55_05055 CDS
T04112
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lku
Apilactobacillus kunkeei
Pathway
lku03420
Nucleotide excision repair
lku03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APS55_05055
03430 Mismatch repair
APS55_05055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lku03400
]
APS55_05055
Enzymes [BR:
lku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APS55_05055
DNA repair and recombination proteins [BR:
lku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APS55_05055
MMR (mismatch excision repair)
Other MMR factors
APS55_05055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ALJ32132
UniProt:
A0AAC8ZZS9
LinkDB
All DBs
Position
1100242..1102476
Genome browser
AA seq
744 aa
AA seq
DB search
MNDKQKEAVLCTEGPLLIMAGAGSGKTRVLTHRIAYLIEEKNVLPWNILAITFTNKAARE
MKERVSNLLDYGGNDVWISTFHALCVRILRRHIDKIGFNRAFTIAGSSEQRTLVKRILKD
FDIDPKKNDPRAILSAISNAKNDLLDPIQYSESIDHNSPFEETVSKVYEEYQKRLHGNQA
LDFDDLIMLTIQLFESDKETLEYYQNKFQYIHVDEYQDTNEAQYKLVTMLAKKYRNICVV
GDSDQSIYGWRGANMNNILNFQDDYNDAHTTLLEQNYRSTKNILGAANDVIQNNVARKAK
NLWTENKEGDKVSYYRGQSEIDEARFAVTQIQKIMDEKHYSYNDFAILYRTNAQSRIIEE
TLLKSNIPYNIVGGHKFYDRKEIQDILAYLTLVANPSDSMSLERIINEPKRGIGASSVDK
LRIFAGENGWSMLEAAKNVDLNNTLSSRARNSIADFANVMTKIQKVAKDGSVTDVAQHVL
DDTGYLAELKKTNSLENKARIENIEEFISVTQQFDTNRSEEDNEDGNEPLTDFLADLALV
SAQDDVEENSPQVTLMTLHAAKGLEFPVVFLMGMEEGIFPLGRSMENEKELEEERRLAYV
GITRAQEKLFLTNAFSRMLYGRRQTNPESRFVNEISPELIESENNFAQSSTVKTPFDSNR
SQRNARFAQQRAYKQPAKKVQKPEGTGADKKAWTVGDKVEHKAWGTGTVVKVNGTGEDME
LDIAFPDKGLKRLLAAFAPIQKVQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataaacaaaaagaagcagtattatgtaccgaaggtcctctattgataatggcc
ggtgcaggtagtggtaagacccgtgtcttaacccatcgcattgcttacttaatcgaagaa
aaaaacgtattgccatggaatatcctagcaattacttttaccaataaagcagcccgtgaa
atgaaggaacgtgtttctaacctactagattacggtggaaacgacgtttggatttctact
ttccatgctctatgtgtcagaattttaagaagacacattgataagattggttttaaccgt
gcatttaccattgccggtagtagtgaacaaagaaccttggtaaagagaattctaaaggac
tttgatattgatcctaagaagaacgacccaagagcaattctttcagctatttcaaacgct
aaaaacgatttattagacccaattcaatacagtgaatcaatcgatcacaacagtccattt
gaagaaactgtatcaaaggtttatgaagaataccaaaaacgtcttcacggaaaccaagca
ttggactttgatgatttaatcatgttaaccatccaattgtttgaatctgacaaggaaaca
ttggaatactaccaaaacaaattccaatacattcacgtcgatgaataccaagataccaat
gaagctcaatacaaactagttactatgcttgctaagaagtacagaaacatctgtgttgtt
ggggattctgatcaaagtatctacggttggcgtggtgccaacatgaacaacatcttgaac
ttccaagatgactacaatgatgctcacacaacattgcttgaacaaaactaccgttcaact
aagaacatcctaggtgctgctaacgacgttattcaaaataacgttgctagaaaggccaag
aacctttggaccgaaaacaaagaaggggacaaggtttcatactatcgtggccaaagcgaa
attgatgaagcacgtttcgcagttacccaaattcaaaagattatggatgaaaagcattac
tcatacaatgattttgctatcctataccgtaccaacgctcaatcacgtatcattgaagaa
acacttctaaaatcaaacattccatacaacattgttggtggacacaagttctacgacaga
aaggaaatccaagacatcttggcttacctaacactagtcgctaacccaagtgattcaatg
agtttagaacgtatcatcaatgaacctaaacgtggaattggtgcttcaagtgttgataaa
cttagaattttcgccggcgaaaacggctggtcaatgctagaagctgccaagaacgttgat
ttaaacaacacactttcaagtcgtgctagaaactcaattgctgactttgccaacgtgatg
actaagattcaaaaggttgctaaagatggtagcgtaacagatgttgcccaacacgtattg
gatgacactggttacctagcagaactaaagaagaccaactcacttgaaaacaaggcacga
attgaaaatattgaagaatttatttcagtaactcaacaattcgataccaacagaagcgaa
gaagacaacgaagatggtaatgaaccactaactgacttcttagcagatctagccttagtt
tccgcacaagacgatgtcgaagaaaactctccacaagttaccctaatgacacttcatgct
gccaaggggctagaattcccagtcgtattcttaatgggaatggaagaaggaatcttccca
ctaggtcgttcaatggaaaacgaaaaggaactagaagaagaacgtcgtttagcatacgtt
ggaattacccgtgcacaagaaaaactattcttaactaacgcgttctcaagaatgttatat
ggtcgtcgtcaaactaatcctgaatcacgttttgtaaacgaaatttcacctgaattaatt
gaatcagaaaacaactttgcacaaagcagtactgtaaagacaccatttgattcaaacaga
agccaacgcaatgctcgttttgcacaacaacgtgcttacaaacaaccagctaagaaggtt
caaaaacctgaaggaactggtgctgacaagaaagcatggaccgttggtgacaaggttgaa
cacaaggcctggggaacaggtactgttgttaaagttaacggtactggcgaagatatggaa
ctagatattgccttcccagacaagggattaaagagactattagctgcattcgcaccaatt
caaaaagttcaatag
DBGET
integrated database retrieval system
