Apilactobacillus kunkeei: APS55_05760
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Entry
APS55_05760 CDS
T04112
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lku
Apilactobacillus kunkeei
Brite
KEGG Orthology (KO) [BR:
lku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lku03016
]
APS55_05760
Enzymes [BR:
lku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
APS55_05760
Transfer RNA biogenesis [BR:
lku03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
APS55_05760
Prokaryotic type
APS55_05760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ALJ31736
LinkDB
All DBs
Position
1235255..1236190
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AA seq
311 aa
AA seq
DB search
MQLEFLGTGSGVPGKFRNVAATALKLLDECNSVWLFDCGEGTQQQILRSNLKPRKINKIF
ITHLHGDHIFGLPGLLSSRSFQGGDTPLTIYGPKGIADFVRVSLSVSQTKLSYKINFEEL
SQPGVVFEDDKFKVTMGELDHQITCYGFRVEEKDHQGELLVDKLKAANIPSGPVYGKIKN
GETVTLDDGREINGQDFIGPAQKGRTVTIIGDTRSNPTSYNLAQNADVLVHESTFGKGES
RLAHNYYHSTNMQAAKLATKANVGRLLLTHVSARYTGKMAYELQNQAKTVFNNTKVVKDF
DIVDIPFEKNN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagaatttttaggaactggatcaggggttccaggtaaatttagaaatgtggct
gcaacagcattaaaactattggatgaatgcaactcagtatggttgtttgattgtggtgaa
ggtactcaacaacaaatcttgagatctaacttaaagcctcgtaaaatcaataaaattttc
attacccacttacatggtgatcatatttttggtttaccaggtctattaagttcacgttca
ttccaaggtggtgacactccattaacaatttatggaccaaaaggaatcgccgactttgtt
cgtgtgagtttatcagtatctcaaactaaactttcttacaagattaattttgaagaatta
tcacaaccaggtgttgtttttgaagatgataaatttaaggtaaccatgggtgaattagat
caccaaattacttgttatggctttagagttgaagaaaaagaccaccaaggtgaactacta
gtcgataagttaaaagcagcaaacattccatctggtccggtatatggaaagattaagaat
ggtgaaactgttactttagatgacggtagagaaattaatggccaagacttcattggtcca
gctcaaaagggtagaacagttaccattattggtgatactagaagcaacccaaccagctac
aacttggcacaaaatgccgatgtattggttcatgaaagtacatttggtaagggcgaaagc
agattggctcacaactactaccattcaaccaacatgcaagctgctaagttagcaactaag
gctaatgttggccgtctattacttactcacgtttcagcaagatacactggtaagatggct
tacgaattacaaaatcaagcaaagactgtctttaataacaccaaggttgttaaggacttt
gatatagtcgatataccgtttgaaaaaaataattaa
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