Apilactobacillus kunkeei: APS55_06270
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Entry
APS55_06270 CDS
T04112
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lku
Apilactobacillus kunkeei
Brite
KEGG Orthology (KO) [BR:
lku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lku03032
]
APS55_06270
03400 DNA repair and recombination proteins [BR:
lku03400
]
APS55_06270
Enzymes [BR:
lku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
APS55_06270
DNA replication proteins [BR:
lku03032
]
Prokaryotic type
DNA Topoisomerases
APS55_06270
DNA repair and recombination proteins [BR:
lku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
APS55_06270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ALJ31835
UniProt:
A0AAC8WCQ7
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All DBs
Position
1343899..1346007
Genome browser
AA seq
702 aa
AA seq
DB search
MATTTKSTTKKKRQSAKKKLVIVESPTKAKTIQKYLGRTYRVIASKGHVRDLPKSKMGVD
VDNDFEPHYISIRGKGDTIKELKAEAKKAKNVYLASDPDREGESIAWHLSHLLGLKEDDK
NRVAFHEITKDAVKEAFKNPREIDMNLVDAQQARRVLDRLVGYSISPLLWKKVKKGLSAG
RVQSIALWLIIQREREIKEFVPKEYWTIDADMKKGREAFKASFYGVNAKKAELNSNDEVQ
AVLAKFDKSKPFEVQNVVKKERKRQPQPPFTTSTMQQDANVKLNFKTGKTMMAAQQLYEG
INIGKDGNQGLITYMRTDSTRISALAKHEASEFIHDKYGAEFAATKPVKGKLPEGAQDAH
EAIRPTSVKRTPASLKQYLTNDQYKLYNLIWSRFMASQMTPAIMDTMTVDMEQNGVDFRA
NGSKLKFEGFLKVYNKGKEKDNILPDLAKGDEVKMAKNNPDQHFTQPPARYSEAKLIRTL
EENGVGRPSTFAPTLSTIQKRYYVKLVGRRFEPTELGEIVNNIIEEYFPDIVNIEFTADL
ENNLDEIEEAKQNWVEVVDKYFRPFEKEVKNAEKNMEDVQIKDEPAGYNCEVCGAPMVIK
MGRYGKFYACSRFPDCRNTQAIVKKIGVTCPKCKKGDVIERKSKKNRIFYGCSRYPECDF
VTWDKPIGRDCPKDGNFLVEKKIKGGTQVVCPNGDYEEAVQK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgactactacaaaatcaacaacaaagaaaaaaagacagtcggcaaaaaagaaacta
gtgattgtcgaatctccaaccaaggctaaaaccattcaaaaatacctaggtagaacctac
cgtgttatcgctagtaagggtcacgttagagatttgccaaagagtaagatgggtgtagac
gtcgacaacgattttgaacctcactacatctctattcgtggtaagggtgatacaatcaag
gaactaaaggctgaagctaaaaaagccaaaaatgtttaccttgcatctgacccggataga
gaaggagaatctatcgcatggcatctatcacacttacttggtttgaaagaagacgataag
aatcgtgttgctttccatgaaattaccaaggatgccgttaaggaagcatttaagaaccct
cgagaaattgacatgaacttagttgatgctcaacaagctcgtcgtgttttagaccgttta
gtaggttattccatttctccattattatggaaaaaggttaaaaaaggtctaagtgccgga
cgtgttcaatcaatcgctttatggttgattatccaaagagaacgtgaaatcaaagaattc
gttccaaaggaatactggaccattgacgccgacatgaagaagggtcgagaagcattcaag
gccagcttttacggagtgaacgctaagaaggctgaattaaacagtaatgatgaagttcaa
gctgtgttagctaaattcgataagagcaaaccatttgaggttcaaaacgttgttaaaaag
gaacgtaagagacaacctcaaccaccatttactacaagtacaatgcaacaagacgccaac
gttaagttgaacttcaagactggtaagacaatgatggcggctcaacaattgtatgaaggt
atcaatattggtaaagatggtaaccaaggtttgattacttacatgagaactgattcaact
agaatttctgctttagctaagcacgaagcatctgaatttattcatgataagtacggtgca
gagtttgctgcaactaaaccagttaagggtaaattgccagaaggtgctcaagacgcccat
gaagcaattcgtccaacctctgttaagagaacaccagcgagcctaaaacaatacttaact
aatgatcaatacaagttatacaacttgatttggtcaagattcatggctagtcaaatgact
cctgctatcatggacaccatgacagtagacatggaacaaaatggtgttgatttcagagct
aacggttcaaaacttaagttcgaaggcttcctaaaggtttacaacaaaggaaaagaaaag
gacaatatcttacctgacctagccaagggtgacgaagtgaagatggctaagaacaatcct
gaccaacacttcactcaaccacctgctagatatagtgaagctaagctaatcagaacactt
gaagaaaacggtgtaggtagaccatctacctttgcgccaactttgagtactattcaaaag
agatactatgttaagttagttggtagaagattcgaacctactgaattaggtgaaattgtt
aataacatcattgaagaatacttccctgatatcgttaacattgaatttactgccgatctt
gaaaataacttagatgaaatcgaagaagctaagcaaaactgggttgaagttgtcgataag
tacttcagaccatttgaaaaagaagttaagaacgccgaaaagaacatggaagatgttcaa
attaaagacgaaccagctggttacaactgtgaagtctgtggtgctccaatggtgatcaag
atgggaagatatggtaaattctatgcttgttctagattcccagattgtcgaaacacccaa
gctatcgttaaaaagattggcgttacatgtcctaaatgtaagaagggcgatgtcattgaa
cgtaaatcaaagaagaatcgaattttctatggatgttcaagataccctgaatgtgatttt
gttacatgggataaaccaatcggaagagactgtcctaaggatggtaacttcttggtagaa
aagaagattaaaggtggtacccaagtggtatgtcctaacggtgattacgaagaagccgta
caaaaatag
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