Apilactobacillus kunkeei: APS55_07390
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Entry
APS55_07390 CDS
T04112
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lku
Apilactobacillus kunkeei
Brite
KEGG Orthology (KO) [BR:
lku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lku03019
]
APS55_07390
03009 Ribosome biogenesis [BR:
lku03009
]
APS55_07390
Enzymes [BR:
lku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
APS55_07390
Messenger RNA biogenesis [BR:
lku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
APS55_07390
Ribosome biogenesis [BR:
lku03009
]
Prokaryotic type
rRNA helicases
APS55_07390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ALJ32034
UniProt:
A0AAC8WD61
LinkDB
All DBs
Position
complement(1556376..1557737)
Genome browser
AA seq
453 aa
AA seq
DB search
MPSTFKQYNLKPFIMDALDELNFREPTAIQEKIIPEIRKGRSVVGQSATGSGKTHAFLLP
IFDNLDVDTLEVQAVITTPSRELAYQIYNNAKQLAKHSDKTMHIANYVGGTDKVRQIEKL
KNEQPQIVIGTPGRISDLIKGQHLQVHTATQLVIDEADMTLDLGFLNDIDNIAASFGKDV
QMMVFSATIPQKLKPFLKKYLENPYVENIPNRTVISPTIDNWLISTKGQNKNDLIYKLIT
MGEPYLVLIFANTRKRVEEIYEFLRNQGLKVGIVSGDLTPRERKRTMKQIQNLEFQYVVA
TDLAARGIDIEGVSDVINDDIPEDLEYFIHRVGRTGRNNMPGTAVTLYSPDEEDEIDALE
KMGISFKPKVIRGGRVEDTYDRNRRKSHRRGHDKLEPTMIGMIKKKKRNVKPGYKNKIKQ
ELKRNDEMNRRIQQREEGRRKRKSKKNSSQRYR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtacatttaagcaatacaacttaaagccattcatcatggatgctttagatgaa
ttaaactttagagaaccaaccgctattcaggaaaagattattcctgaaatccgtaagggt
agaagtgttgttggtcaatcagccactggtagtggtaagactcatgcgttcttgttacca
atttttgataacttagacgttgacactttggaagtccaagctgttatcaccacaccaagt
cgtgaattagcttaccaaatttacaacaatgctaagcaactagctaagcattcagacaag
accatgcatatcgctaactatgttggtggtactgataaggttagacaaattgaaaagcta
aagaatgaacaaccacaaatcgttattggaactccaggtcgtatttctgacttgatcaag
ggtcaacatctacaagttcacacagctactcaactagtaattgatgaagccgatatgaca
ttagaccttggttttttaaatgatatcgacaacatcgctgccagctttggtaaggatgtt
caaatgatggtgttctcagcaaccattccacaaaaattgaaaccattcttgaagaagtat
ctggaaaacccatacgttgaaaatattccaaacagaactgttatcagcccaacaattgat
aactggttaatttcaactaagggtcaaaataagaacgatttaatctacaagttaatcacc
atgggtgaaccttaccttgtattaatctttgctaacactagaaaacgtgttgaagaaatt
tacgaattcttacgtaaccaaggattaaaggtgggaatcgtttctggtgatttaacacca
cgtgaacgtaagagaaccatgaaacaaattcaaaatcttgaattccaatacgttgtagcg
actgatttagctgctcgtggaattgatatcgaaggggtttctgacgttatcaatgatgat
attccagaagacttagaatacttcattcaccgtgttggtagaacaggtagaaataatatg
cctggaactgcggtaactctttactctcctgatgaagaagatgaaattgacgcattagaa
aagatgggcatttcatttaagccaaaggttatccgcggtggccgtgttgaagacacttac
gatcgtaaccgtagaaagtcgcaccgtcgtggtcatgacaagctagaaccaaccatgatt
ggtatgattaagaagaagaagagaaacgttaagcctggttacaagaacaagattaaacaa
gaacttaagcgaaacgatgaaatgaatcgtcgtatccagcaaagagaagaaggacgtcgt
aagagaaagtccaagaagaacagttcacaacgttatagataa
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