Lactococcus lactis subsp. lactis Il1403: L0298
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Entry
L0298 CDS
T00045
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lla
Lactococcus lactis subsp. lactis Il1403
Brite
KEGG Orthology (KO) [BR:
lla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lla03032
]
L0298 (topA)
03400 DNA repair and recombination proteins [BR:
lla03400
]
L0298 (topA)
Enzymes [BR:
lla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L0298 (topA)
DNA replication proteins [BR:
lla03032
]
Prokaryotic type
DNA Topoisomerases
L0298 (topA)
DNA repair and recombination proteins [BR:
lla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L0298 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
DUF5091
C1_2
Motif
Other DBs
NCBI-ProteinID:
AAK05328
UniProt:
Q9CG80
LinkDB
All DBs
Position
1254565..1256697
Genome browser
AA seq
710 aa
AA seq
DB search
MPTSTKSKTKTTTKKKTTRKRVTPGKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDL
KKSTMSVDIENDYEPQYINIRGKAPLINSLKKEAKAAKAVYLASDPDREGEAISWHLAHI
LNLPLEEKNRVVFNEITKDAVKNAFKEPRQIDVDLVDAQQARRVLDRLVGYSISPILWKK
VKKGLSAGRVQSIALKLIVDRENEINAFIPEEYWSIDGEFKKGTKKFKASFWGIDGKKHP
LKTNEDVIKVMERLDGPDFNVDKVEKKERRRNAPLPYTTSSMQQDAANKLNFRTRKTMMV
AQQLYEGLTLGSQGHQGLITYMRTDSTRISPVAQSAAHNYIADQFGEKYSKHGSKVKNAS
GAQDAHEAIRPSNVFNTPDAIAKYLDKDQLKLYTLIWNRFVASQMVAAIFDTVKVNLSQN
GVIFIANGSQVKFDGYLRIYNDSDKSNMLPEMEENETVKKANVKPEQHFTQPPARYSEAT
LIKTLEENGVGRPSTYAPTLETIQKRYYVRLSAKRFEPTELGEIVNKLIVEFFPNIVNTE
FTAEMEKDLDEVEEGKRQWIEVVDQFYKPFAKELENAEEGMEKIQIKDEPAGFDCDVCGS
PMVIKLGRFGKFYACSNFPDCRNTKAIVKEIGVKCPLCHEGNIIERKTKKNRIFYGCDRY
PDCEFTSWDKPIGRDCPKSGHFLVEKKVRGGGKQVVCSNDECDYQEEKQK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttcaactaaaagtaaaacaaaaacaactacaaagaaaaaaacaacacgaaaa
agagtcactccaggtaaaaatctggttattgtagaatcgccagcaaaagctaaaacaatt
gaaaaatatttaggtcgaaactacaaagttgtggcttcagtaggtcatattcgtgatttg
aaaaaatcaaccatgtctgttgatatagagaatgactatgaacctcaatatattaatatt
cgtgggaaagccccattaatcaactctctcaaaaaagaagcaaaggctgccaaagccgtc
tatctcgcaagtgacccggaccgtgaaggtgaagcaatttcttggcacttagcacatatc
ttaaatcttccacttgaagaaaaaaatcgagtggtctttaatgaaatcactaaagatgct
gttaaaaatgcctttaaggagccgcgtcaaattgatgtggatctagttgatgcccaacaa
gcacgccgagttcttgaccgtttggtgggttattcaattagtcctattctatggaaaaaa
gtcaaaaaaggactttcagcaggtcgagttcaatctattgccttaaaactaattgttgac
cgcgagaatgaaattaatgcttttattccagaagagtattggtcaattgatggtgaattt
aaaaaaggaactaaaaaattcaaagcatccttctggggaattgacggaaaaaaacatcct
ttaaaaaccaatgaagatgtcatcaaagtcatggaacgtttagacggtcctgattttaac
gtagataaagttgaaaagaaagaacgtcgcagaaacgctcctcttccttatacaactagc
tcaatgcaacaagacgcagctaataaacttaactttcgtacccgtaaaacaatgatggtt
gctcaacaactttatgaaggtcttactttaggaagccagggccatcaaggtttaattacc
tatatgcgtacagactcaacacgtatttctcctgttgcacaaagtgcagctcacaattat
attgctgatcaatttggagaaaaatatagtaaacacggttcaaaagttaaaaatgcctct
ggagcccaagatgcccacgaagcaattcgaccttcaaatgtctttaacactccagacgcc
attgctaaatatctagacaaagatcaactaaaactttacacactcatctggaatcgtttc
gttgccagtcaaatggtcgcagctattttcgatactgttaaagtaaatctgtctcaaaat
ggtgttatctttattgctaatggttcacaagtgaaatttgacggttatctgcgaatctac
aatgattctgataaatcaaatatgcttccagagatggaagaaaatgaaactgtcaaaaaa
gcgaatgttaaaccagaacaacatttcactcaaccaccagctagatattccgaagcaaca
ctcatcaagacattggaagaaaatggagtgggacgtccctcaacctatgcgcctacacta
gaaacaattcaaaaacgttactatgtgagattgtcagcaaaacgttttgaacctacagag
cttggagaaattgtcaataagcttattgttgagttcttccctaacattgtaaatactgaa
tttacagctgaaatggaaaaagatcttgatgaagttgaagaaggaaaacgtcaatggatt
gaggttgttgaccaattttacaaaccctttgcaaaagaacttgaaaatgccgaagaaggt
atggaaaaaattcaaatcaaggatgaacctgctggctttgactgtgatgtttgtggaagt
ccgatggtaattaagttgggacgttttggaaaattttacgcttgtagcaacttcccagat
tgccgaaacaccaaagcaattgtcaaagaaataggcgtaaaatgtccactttgccatgaa
ggaaatattattgaacgcaaaacaaagaaaaatagaattttctatggttgtgatcgttac
ccagactgtgaattcacaagttgggacaaacctatcggacgtgattgtcctaaatctgga
cattttcttgttgaaaagaaagttcgtggtggcggtaaacaagtggtatgttcaaatgat
gaatgtgattatcaagaagaaaaacaaaaataa
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